RNA–Protein interactions for RNA: ENST00000554207.1

PSMA3-205, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-205ENST00000554207 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
PSMA3-205ENST00000554207 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
PSMA3-205ENST00000554207 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
PSMA3-205ENST00000554207 PPP1R37O75864 691 aa12.36□□□□□ -0.43
PSMA3-205ENST00000554207 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
PSMA3-205ENST00000554207 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
PSMA3-205ENST00000554207 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
PSMA3-205ENST00000554207 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
PSMA3-205ENST00000554207 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
PSMA3-205ENST00000554207 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
PSMA3-205ENST00000554207 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
PSMA3-205ENST00000554207 SOX12O15370 315 aa12.27□□□□□ -0.45
PSMA3-205ENST00000554207 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
PSMA3-205ENST00000554207 BCANQ96GW7 911 aa12.27□□□□□ -0.45
PSMA3-205ENST00000554207 NLRP6P59044 892 aa12.26□□□□□ -0.45
PSMA3-205ENST00000554207 G3V3G9 751 aa12.23□□□□□ -0.45
PSMA3-205ENST00000554207 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
PSMA3-205ENST00000554207 EMP3P54852 163 aa12.19□□□□□ -0.46
PSMA3-205ENST00000554207 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
PSMA3-205ENST00000554207 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
PSMA3-205ENST00000554207 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
PSMA3-205ENST00000554207 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
PSMA3-205ENST00000554207 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
PSMA3-205ENST00000554207 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
PSMA3-205ENST00000554207 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
PSMA3-205ENST00000554207 KCNV2Q8TDN2 545 aa12.07□□□□□ -0.48
PSMA3-205ENST00000554207 NBR1Q14596 966 aa12.06□□□□□ -0.48
PSMA3-205ENST00000554207 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
PSMA3-205ENST00000554207 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
PSMA3-205ENST00000554207 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
PSMA3-205ENST00000554207 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
PSMA3-205ENST00000554207 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
PSMA3-205ENST00000554207 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
PSMA3-205ENST00000554207 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
PSMA3-205ENST00000554207 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
PSMA3-205ENST00000554207 DOK7Q18PE1 504 aa11.96□□□□□ -0.49
PSMA3-205ENST00000554207 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
PSMA3-205ENST00000554207 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
PSMA3-205ENST00000554207 MFSD10Q14728 455 aa11.95□□□□□ -0.5
PSMA3-205ENST00000554207 PDE4AP27815 886 aa11.94□□□□□ -0.5
PSMA3-205ENST00000554207 E2F4Q16254 413 aa11.93□□□□□ -0.5
PSMA3-205ENST00000554207 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
PSMA3-205ENST00000554207 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
PSMA3-205ENST00000554207 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
PSMA3-205ENST00000554207 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
PSMA3-205ENST00000554207 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
PSMA3-205ENST00000554207 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
PSMA3-205ENST00000554207 DSG2Q14126 1118 aa11.85□□□□□ -0.51
PSMA3-205ENST00000554207 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
PSMA3-205ENST00000554207 ERBB3P21860 1342 aa11.83□□□□□ -0.52
PSMA3-205ENST00000554207 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
PSMA3-205ENST00000554207 SEMA3EO15041 775 aa11.82□□□□□ -0.52
PSMA3-205ENST00000554207 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
PSMA3-205ENST00000554207 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
PSMA3-205ENST00000554207 GPR153Q6NV75 609 aa11.81□□□□□ -0.52
PSMA3-205ENST00000554207 KIF3CO14782 793 aa11.8□□□□□ -0.52
PSMA3-205ENST00000554207 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
PSMA3-205ENST00000554207 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
PSMA3-205ENST00000554207 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
PSMA3-205ENST00000554207 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
PSMA3-205ENST00000554207 FOXK1P85037 733 aa11.76□□□□□ -0.53
PSMA3-205ENST00000554207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
PSMA3-205ENST00000554207 PLPP6Q8IY26 295 aa11.76□□□□□ -0.53
PSMA3-205ENST00000554207 DPYSL4O14531 572 aa11.74□□□□□ -0.53
PSMA3-205ENST00000554207 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
PSMA3-205ENST00000554207 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
PSMA3-205ENST00000554207 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
PSMA3-205ENST00000554207 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
PSMA3-205ENST00000554207 PTGER2P43116 358 aa11.72□□□□□ -0.53
PSMA3-205ENST00000554207 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSMA3-205ENST00000554207 MLLT3P42568 568 aaPredicted RBP11.69□□□□□ -0.54
PSMA3-205ENST00000554207 SLC34A2O95436 690 aa11.66□□□□□ -0.54
PSMA3-205ENST00000554207 ZNF687Q8N1G0 1237 aa11.66□□□□□ -0.54
PSMA3-205ENST00000554207 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
PSMA3-205ENST00000554207 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
PSMA3-205ENST00000554207 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
PSMA3-205ENST00000554207 NUDT7P0C024 238 aa11.63□□□□□ -0.55
PSMA3-205ENST00000554207 PDIA6Q15084 440 aa11.62□□□□□ -0.55
PSMA3-205ENST00000554207 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
PSMA3-205ENST00000554207 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
PSMA3-205ENST00000554207 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
PSMA3-205ENST00000554207 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
PSMA3-205ENST00000554207 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
PSMA3-205ENST00000554207 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
PSMA3-205ENST00000554207 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
PSMA3-205ENST00000554207 SPDYE16A6NNV3 312 aaPredicted RBP11.54□□□□□ -0.56
PSMA3-205ENST00000554207 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
PSMA3-205ENST00000554207 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
PSMA3-205ENST00000554207 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
PSMA3-205ENST00000554207 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
PSMA3-205ENST00000554207 TBC1D12O60347 775 aa11.49□□□□□ -0.57
PSMA3-205ENST00000554207 EVI5O60447 810 aa11.49□□□□□ -0.57
PSMA3-205ENST00000554207 DDX12PQ92771 950 aa11.49□□□□□ -0.57
PSMA3-205ENST00000554207 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
PSMA3-205ENST00000554207 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.57
PSMA3-205ENST00000554207 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
PSMA3-205ENST00000554207 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
PSMA3-205ENST00000554207 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.57
PSMA3-205ENST00000554207 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
PSMA3-205ENST00000554207 ZMYND10O75800 440 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms