RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
TDP1-209ENST00000554180 CAMSAP2Q08AD1 1489 aa11.58□□□□□ -0.56
TDP1-209ENST00000554180 MYO5CQ9NQX4 1742 aa11.58□□□□□ -0.56
TDP1-209ENST00000554180 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
TDP1-209ENST00000554180 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
TDP1-209ENST00000554180 GLI2P10070 1586 aa11.56□□□□□ -0.56
TDP1-209ENST00000554180 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
TDP1-209ENST00000554180 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
TDP1-209ENST00000554180 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
TDP1-209ENST00000554180 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
TDP1-209ENST00000554180 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
TDP1-209ENST00000554180 ARHGEF5Q12774 1597 aa11.53□□□□□ -0.56
TDP1-209ENST00000554180 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
TDP1-209ENST00000554180 DIP2BQ9P265 1576 aa11.53□□□□□ -0.56
TDP1-209ENST00000554180 DAPK1P53355 1430 aa11.52□□□□□ -0.56
TDP1-209ENST00000554180 CD109Q6YHK3 1445 aa11.52□□□□□ -0.56
TDP1-209ENST00000554180 FANCAO15360 1455 aa11.52□□□□□ -0.56
TDP1-209ENST00000554180 SHANK2Q9UPX8 1470 aa11.52□□□□□ -0.56
TDP1-209ENST00000554180 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
TDP1-209ENST00000554180 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
TDP1-209ENST00000554180 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
TDP1-209ENST00000554180 CFAP74Q9C0B2 1584 aa11.51□□□□□ -0.57
TDP1-209ENST00000554180 ZNF777Q9ULD5 760 aaPredicted RBP11.51□□□□□ -0.57
TDP1-209ENST00000554180 ABCC5O15440 1437 aa11.51□□□□□ -0.57
TDP1-209ENST00000554180 ABCC1P33527 1531 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
TDP1-209ENST00000554180 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
TDP1-209ENST00000554180 NEO1Q92859 1461 aa11.49□□□□□ -0.57
TDP1-209ENST00000554180 ITGAEP38570 1179 aa11.48□□□□□ -0.57
TDP1-209ENST00000554180 ADGRL2O95490 1459 aa11.48□□□□□ -0.57
TDP1-209ENST00000554180 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
TDP1-209ENST00000554180 ADGRL1O94910 1474 aa11.47□□□□□ -0.57
TDP1-209ENST00000554180 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
TDP1-209ENST00000554180 C9orf84Q5VXU9 1444 aa11.46□□□□□ -0.57
TDP1-209ENST00000554180 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
TDP1-209ENST00000554180 MAST1Q9Y2H9 1570 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 TSPY4P0CV99 314 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 TSPY10P0CW01 314 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 HRCP23327 699 aa11.45□□□□□ -0.58
TDP1-209ENST00000554180 NAIPQ13075 1403 aa11.44□□□□□ -0.58
TDP1-209ENST00000554180 ANKRD30AQ9BXX3 1397 aa11.44□□□□□ -0.58
TDP1-209ENST00000554180 HNRNPMP52272 730 aaKnown RBP eCLIP11.44□□□□□ -0.58
TDP1-209ENST00000554180 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
TDP1-209ENST00000554180 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 TRAPPC8Q9Y2L5 1435 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
TDP1-209ENST00000554180 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
TDP1-209ENST00000554180 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
TDP1-209ENST00000554180 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
TDP1-209ENST00000554180 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
TDP1-209ENST00000554180 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
TDP1-209ENST00000554180 KDM5CP41229 1560 aa11.4□□□□□ -0.58
TDP1-209ENST00000554180 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.59
TDP1-209ENST00000554180 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.59
TDP1-209ENST00000554180 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
TDP1-209ENST00000554180 KIF15Q9NS87 1388 aa11.39□□□□□ -0.59
TDP1-209ENST00000554180 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
TDP1-209ENST00000554180 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
TDP1-209ENST00000554180 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
TDP1-209ENST00000554180 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
TDP1-209ENST00000554180 ANKRD50Q9ULJ7 1429 aa11.37□□□□□ -0.59
TDP1-209ENST00000554180 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
TDP1-209ENST00000554180 AFAP1Q8N556 730 aa11.37□□□□□ -0.59
TDP1-209ENST00000554180 ERBINQ96RT1 1412 aa11.35□□□□□ -0.59
TDP1-209ENST00000554180 ZMYM4Q5VZL5 1548 aa11.35□□□□□ -0.59
TDP1-209ENST00000554180 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
TDP1-209ENST00000554180 HECW2Q9P2P5 1572 aa11.35□□□□□ -0.59
TDP1-209ENST00000554180 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
TDP1-209ENST00000554180 CLSPNQ9HAW4 1339 aa11.34□□□□□ -0.59
TDP1-209ENST00000554180 MAGI2Q86UL8 1455 aa11.33□□□□□ -0.6
TDP1-209ENST00000554180 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
TDP1-209ENST00000554180 FRMPD1Q5SYB0 1578 aa11.33□□□□□ -0.6
TDP1-209ENST00000554180 TSPOAP1O95153 1857 aa11.32□□□□□ -0.6
TDP1-209ENST00000554180 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
TDP1-209ENST00000554180 KDM6BO15054 1643 aa11.31□□□□□ -0.6
TDP1-209ENST00000554180 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
TDP1-209ENST00000554180 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
TDP1-209ENST00000554180 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
TDP1-209ENST00000554180 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
TDP1-209ENST00000554180 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
TDP1-209ENST00000554180 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
TDP1-209ENST00000554180 A2MP01023 1474 aa11.28□□□□□ -0.6
TDP1-209ENST00000554180 UNC13BO14795 1591 aa11.28□□□□□ -0.6
TDP1-209ENST00000554180 ABCA6Q8N139 1617 aa11.27□□□□□ -0.6
TDP1-209ENST00000554180 COL17A1Q9UMD9 1497 aaPredicted RBP11.27□□□□□ -0.6
TDP1-209ENST00000554180 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
TDP1-209ENST00000554180 DIP2CQ9Y2E4 1556 aa11.27□□□□□ -0.61
TDP1-209ENST00000554180 REREQ9P2R6 1566 aa11.26□□□□□ -0.61
TDP1-209ENST00000554180 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
TDP1-209ENST00000554180 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms