RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ASXL2Q76L83 1435 aa16.44■□□□□ 0.22
PABPN1-203ENST00000553960 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
PABPN1-203ENST00000553960 CDC42BPBQ9Y5S2 1711 aa16.43■□□□□ 0.22
PABPN1-203ENST00000553960 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
PABPN1-203ENST00000553960 TTC37Q6PGP7 1564 aa16.42■□□□□ 0.22
PABPN1-203ENST00000553960 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
PABPN1-203ENST00000553960 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
PABPN1-203ENST00000553960 GLI2P10070 1586 aa16.41■□□□□ 0.22
PABPN1-203ENST00000553960 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
PABPN1-203ENST00000553960 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
PABPN1-203ENST00000553960 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
PABPN1-203ENST00000553960 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
PABPN1-203ENST00000553960 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
PABPN1-203ENST00000553960 DAPK1P53355 1430 aa16.37■□□□□ 0.21
PABPN1-203ENST00000553960 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
PABPN1-203ENST00000553960 ABCC5O15440 1437 aa16.36■□□□□ 0.21
PABPN1-203ENST00000553960 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
PABPN1-203ENST00000553960 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
PABPN1-203ENST00000553960 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
PABPN1-203ENST00000553960 MAST1Q9Y2H9 1570 aa16.35■□□□□ 0.21
PABPN1-203ENST00000553960 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
PABPN1-203ENST00000553960 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
PABPN1-203ENST00000553960 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
PABPN1-203ENST00000553960 GCC2Q8IWJ2 1684 aa16.33■□□□□ 0.2
PABPN1-203ENST00000553960 NAIPQ13075 1403 aa16.32■□□□□ 0.2
PABPN1-203ENST00000553960 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
PABPN1-203ENST00000553960 ABCC1P33527 1531 aa16.3■□□□□ 0.2
PABPN1-203ENST00000553960 NCOA1Q15788 1441 aa16.3■□□□□ 0.2
PABPN1-203ENST00000553960 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
PABPN1-203ENST00000553960 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
PABPN1-203ENST00000553960 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
PABPN1-203ENST00000553960 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
PABPN1-203ENST00000553960 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
PABPN1-203ENST00000553960 NEO1Q92859 1461 aa16.29■□□□□ 0.2
PABPN1-203ENST00000553960 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
PABPN1-203ENST00000553960 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
PABPN1-203ENST00000553960 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
PABPN1-203ENST00000553960 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
PABPN1-203ENST00000553960 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
PABPN1-203ENST00000553960 FANCAO15360 1455 aa16.25■□□□□ 0.19
PABPN1-203ENST00000553960 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
PABPN1-203ENST00000553960 DIP2BQ9P265 1576 aa16.24■□□□□ 0.19
PABPN1-203ENST00000553960 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
PABPN1-203ENST00000553960 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
PABPN1-203ENST00000553960 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
PABPN1-203ENST00000553960 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
PABPN1-203ENST00000553960 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
PABPN1-203ENST00000553960 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
PABPN1-203ENST00000553960 TSPY4P0CV99 314 aa16.2■□□□□ 0.18
PABPN1-203ENST00000553960 TSPY10P0CW01 314 aa16.2■□□□□ 0.18
PABPN1-203ENST00000553960 KDM5CP41229 1560 aa16.18■□□□□ 0.18
PABPN1-203ENST00000553960 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
PABPN1-203ENST00000553960 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PABPN1-203ENST00000553960 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
PABPN1-203ENST00000553960 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
PABPN1-203ENST00000553960 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
PABPN1-203ENST00000553960 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
PABPN1-203ENST00000553960 TEX14Q8IWB6 1497 aa16.15■□□□□ 0.18
PABPN1-203ENST00000553960 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.18
PABPN1-203ENST00000553960 TRAPPC8Q9Y2L5 1435 aa16.14■□□□□ 0.17
PABPN1-203ENST00000553960 ITGAEP38570 1179 aa16.14■□□□□ 0.17
PABPN1-203ENST00000553960 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.17
PABPN1-203ENST00000553960 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
PABPN1-203ENST00000553960 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
PABPN1-203ENST00000553960 SCAPERQ9BY12 1400 aa16.13■□□□□ 0.17
PABPN1-203ENST00000553960 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
PABPN1-203ENST00000553960 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
PABPN1-203ENST00000553960 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
PABPN1-203ENST00000553960 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
PABPN1-203ENST00000553960 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
PABPN1-203ENST00000553960 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
PABPN1-203ENST00000553960 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
PABPN1-203ENST00000553960 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
PABPN1-203ENST00000553960 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
PABPN1-203ENST00000553960 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
PABPN1-203ENST00000553960 BCORL1Q5H9F3 1711 aa16.09■□□□□ 0.17
PABPN1-203ENST00000553960 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
PABPN1-203ENST00000553960 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.17
PABPN1-203ENST00000553960 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
PABPN1-203ENST00000553960 UNC13BO14795 1591 aa16.08■□□□□ 0.16
PABPN1-203ENST00000553960 KDM6BO15054 1643 aa16.08■□□□□ 0.16
PABPN1-203ENST00000553960 RICTORQ6R327 1708 aa16.08■□□□□ 0.16
PABPN1-203ENST00000553960 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
PABPN1-203ENST00000553960 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
PABPN1-203ENST00000553960 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
PABPN1-203ENST00000553960 KIDINS220Q9ULH0 1771 aa16.07■□□□□ 0.16
PABPN1-203ENST00000553960 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
PABPN1-203ENST00000553960 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
PABPN1-203ENST00000553960 HECW2Q9P2P5 1572 aa16.04■□□□□ 0.16
PABPN1-203ENST00000553960 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
PABPN1-203ENST00000553960 REREQ9P2R6 1566 aa16.03■□□□□ 0.16
PABPN1-203ENST00000553960 PZPP20742 1482 aa16.03■□□□□ 0.16
PABPN1-203ENST00000553960 AFAP1Q8N556 730 aa16.02■□□□□ 0.16
PABPN1-203ENST00000553960 VWDEQ8N2E2 1590 aa16.01■□□□□ 0.15
PABPN1-203ENST00000553960 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
PABPN1-203ENST00000553960 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
PABPN1-203ENST00000553960 ATP10AO60312 1499 aa15.98■□□□□ 0.15
PABPN1-203ENST00000553960 RNF17Q9BXT8 1623 aaKnown RBP15.98■□□□□ 0.15
PABPN1-203ENST00000553960 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
PABPN1-203ENST00000553960 FAM135AQ9P2D6 1515 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms