RNA–Protein interactions for RNA: ENST00000553907.1

ACTR10-203, Transcript of actin related protein 10 homolog, humanhuman

TSL 3

Gene ACTR10, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-203ENST00000553907 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
ACTR10-203ENST00000553907 TMC2Q8TDI7 906 aa17.1■□□□□ 0.33
ACTR10-203ENST00000553907 LARP6Q9BRS8 491 aaKnown RBP17.1■□□□□ 0.33
ACTR10-203ENST00000553907 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
ACTR10-203ENST00000553907 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
ACTR10-203ENST00000553907 GPHNQ9NQX3 736 aaPredicted RBP17.06■□□□□ 0.32
ACTR10-203ENST00000553907 MFSD10Q14728 455 aa17.04■□□□□ 0.32
ACTR10-203ENST00000553907 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.99■□□□□ 0.31
ACTR10-203ENST00000553907 PPP1R15BQ5SWA1 713 aa16.98■□□□□ 0.31
ACTR10-203ENST00000553907 E2F4Q16254 413 aa16.97■□□□□ 0.31
ACTR10-203ENST00000553907 BCANQ96GW7 911 aa16.97■□□□□ 0.31
ACTR10-203ENST00000553907 C2orf72A6NCS6 295 aa16.95■□□□□ 0.3
ACTR10-203ENST00000553907 FOXK1P85037 733 aa16.93■□□□□ 0.3
ACTR10-203ENST00000553907 KIF3CO14782 793 aa16.92■□□□□ 0.3
ACTR10-203ENST00000553907 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
ACTR10-203ENST00000553907 DSG2Q14126 1118 aa16.91■□□□□ 0.3
ACTR10-203ENST00000553907 NBR1Q14596 966 aa16.91■□□□□ 0.3
ACTR10-203ENST00000553907 KCNV2Q8TDN2 545 aa16.91■□□□□ 0.3
ACTR10-203ENST00000553907 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
ACTR10-203ENST00000553907 TMEM92Q6UXU6 159 aa16.88■□□□□ 0.29
ACTR10-203ENST00000553907 PLPP6Q8IY26 295 aa16.87■□□□□ 0.29
ACTR10-203ENST00000553907 CAMK2BQ13554 666 aa16.85■□□□□ 0.29
ACTR10-203ENST00000553907 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
ACTR10-203ENST00000553907 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
ACTR10-203ENST00000553907 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
ACTR10-203ENST00000553907 ARIH1Q9Y4X5 557 aaPredicted RBP16.76■□□□□ 0.27
ACTR10-203ENST00000553907 SLAIN1Q8ND83 568 aa16.74■□□□□ 0.27
ACTR10-203ENST00000553907 EMILIN3Q9NT22 766 aa16.7■□□□□ 0.26
ACTR10-203ENST00000553907 LHX8Q68G74 356 aa16.67■□□□□ 0.26
ACTR10-203ENST00000553907 DPYSL4O14531 572 aa16.66■□□□□ 0.26
ACTR10-203ENST00000553907 MAP3K9P80192 1104 aa16.65■□□□□ 0.26
ACTR10-203ENST00000553907 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
ACTR10-203ENST00000553907 TBC1D12O60347 775 aa16.64■□□□□ 0.25
ACTR10-203ENST00000553907 SLC34A2O95436 690 aa16.64■□□□□ 0.25
ACTR10-203ENST00000553907 SPDYE16A6NNV3 312 aaPredicted RBP16.63■□□□□ 0.25
ACTR10-203ENST00000553907 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
ACTR10-203ENST00000553907 TULP1O00294 542 aaPredicted RBP16.62■□□□□ 0.25
ACTR10-203ENST00000553907 DOK7Q18PE1 504 aa16.62■□□□□ 0.25
ACTR10-203ENST00000553907 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
ACTR10-203ENST00000553907 PTCD2Q8WV60 388 aaKnown RBP16.6■□□□□ 0.25
ACTR10-203ENST00000553907 PDIA6Q15084 440 aa16.59■□□□□ 0.25
ACTR10-203ENST00000553907 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
ACTR10-203ENST00000553907 SNPHO15079 494 aa16.58■□□□□ 0.24
ACTR10-203ENST00000553907 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
ACTR10-203ENST00000553907 SEMA3EO15041 775 aa16.54■□□□□ 0.24
ACTR10-203ENST00000553907 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
ACTR10-203ENST00000553907 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
ACTR10-203ENST00000553907 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
ACTR10-203ENST00000553907 PCDHGA4Q9Y5G9 962 aa16.51■□□□□ 0.23
ACTR10-203ENST00000553907 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
ACTR10-203ENST00000553907 HOXB3P14651 431 aaPredicted RBP16.49■□□□□ 0.23
ACTR10-203ENST00000553907 EVI5O60447 810 aa16.48■□□□□ 0.23
ACTR10-203ENST00000553907 PTGER2P43116 358 aa16.39■□□□□ 0.21
ACTR10-203ENST00000553907 MLLT3P42568 568 aaPredicted RBP16.38■□□□□ 0.21
ACTR10-203ENST00000553907 ARSIQ5FYB1 569 aa16.38■□□□□ 0.21
ACTR10-203ENST00000553907 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
ACTR10-203ENST00000553907 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
ACTR10-203ENST00000553907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTR10-203ENST00000553907 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
ACTR10-203ENST00000553907 GPR153Q6NV75 609 aa16.35■□□□□ 0.21
ACTR10-203ENST00000553907 NUDT7P0C024 238 aa16.33■□□□□ 0.2
ACTR10-203ENST00000553907 DDX12PQ92771 950 aa16.33■□□□□ 0.2
ACTR10-203ENST00000553907 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
ACTR10-203ENST00000553907 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
ACTR10-203ENST00000553907 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTR10-203ENST00000553907 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
ACTR10-203ENST00000553907 EPAS1Q99814 870 aa16.28■□□□□ 0.2
ACTR10-203ENST00000553907 PHF14O94880 888 aa16.27■□□□□ 0.2
ACTR10-203ENST00000553907 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
ACTR10-203ENST00000553907 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
ACTR10-203ENST00000553907 OSBPP22059 807 aa16.23■□□□□ 0.19
ACTR10-203ENST00000553907 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
ACTR10-203ENST00000553907 TYW1BQ6NUM6 668 aa16.22■□□□□ 0.19
ACTR10-203ENST00000553907 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
ACTR10-203ENST00000553907 FOSBP53539 338 aa16.2■□□□□ 0.18
ACTR10-203ENST00000553907 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
ACTR10-203ENST00000553907 ZNF454Q8N9F8 522 aa16.2■□□□□ 0.18
ACTR10-203ENST00000553907 LHX6Q9UPM6 363 aa16.19■□□□□ 0.18
ACTR10-203ENST00000553907 PCDHGA10Q9Y5H3 936 aa16.19■□□□□ 0.18
ACTR10-203ENST00000553907 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
ACTR10-203ENST00000553907 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
ACTR10-203ENST00000553907 ST18O60284 1047 aa16.16■□□□□ 0.18
ACTR10-203ENST00000553907 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
ACTR10-203ENST00000553907 MAP3K7O43318 606 aa16.15■□□□□ 0.18
ACTR10-203ENST00000553907 ZDHHC16Q969W1 377 aa16.15■□□□□ 0.18
ACTR10-203ENST00000553907 FAM163AQ96GL9 167 aaPredicted RBP16.14■□□□□ 0.17
ACTR10-203ENST00000553907 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
ACTR10-203ENST00000553907 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
ACTR10-203ENST00000553907 PRKCSHP14314 528 aaPredicted RBP16.11■□□□□ 0.17
ACTR10-203ENST00000553907 EMP3P54852 163 aa16.1■□□□□ 0.17
ACTR10-203ENST00000553907 ERBB3P21860 1342 aa16.09■□□□□ 0.17
ACTR10-203ENST00000553907 PRIM1P49642 420 aaKnown RBP16.08■□□□□ 0.16
ACTR10-203ENST00000553907 FCHSD2O94868 740 aa16.07■□□□□ 0.16
ACTR10-203ENST00000553907 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
ACTR10-203ENST00000553907 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
ACTR10-203ENST00000553907 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
ACTR10-203ENST00000553907 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
ACTR10-203ENST00000553907 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
ACTR10-203ENST00000553907 ZMYND10O75800 440 aa16.01■□□□□ 0.15
ACTR10-203ENST00000553907 TSR1Q2NL82 804 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms