RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
ATL1-204ENST00000553746 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
ATL1-204ENST00000553746 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
ATL1-204ENST00000553746 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
ATL1-204ENST00000553746 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
ATL1-204ENST00000553746 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
ATL1-204ENST00000553746 KIF3CO14782 793 aa13.24□□□□□ -0.29
ATL1-204ENST00000553746 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
ATL1-204ENST00000553746 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
ATL1-204ENST00000553746 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
ATL1-204ENST00000553746 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
ATL1-204ENST00000553746 ERBB3P21860 1342 aa13.21□□□□□ -0.29
ATL1-204ENST00000553746 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
ATL1-204ENST00000553746 PPP1R37O75864 691 aa13.17□□□□□ -0.3
ATL1-204ENST00000553746 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
ATL1-204ENST00000553746 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
ATL1-204ENST00000553746 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
ATL1-204ENST00000553746 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
ATL1-204ENST00000553746 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
ATL1-204ENST00000553746 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
ATL1-204ENST00000553746 SLC34A2O95436 690 aa13.11□□□□□ -0.31
ATL1-204ENST00000553746 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
ATL1-204ENST00000553746 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
ATL1-204ENST00000553746 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATL1-204ENST00000553746 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
ATL1-204ENST00000553746 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
ATL1-204ENST00000553746 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
ATL1-204ENST00000553746 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
ATL1-204ENST00000553746 FOXK1P85037 733 aa12.99□□□□□ -0.33
ATL1-204ENST00000553746 NUDT7P0C024 238 aa12.97□□□□□ -0.33
ATL1-204ENST00000553746 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
ATL1-204ENST00000553746 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
ATL1-204ENST00000553746 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
ATL1-204ENST00000553746 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
ATL1-204ENST00000553746 DSG2Q14126 1118 aa12.91□□□□□ -0.34
ATL1-204ENST00000553746 PBX2P40425 430 aa12.89□□□□□ -0.35
ATL1-204ENST00000553746 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
ATL1-204ENST00000553746 PTGER2P43116 358 aa12.87□□□□□ -0.35
ATL1-204ENST00000553746 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
ATL1-204ENST00000553746 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
ATL1-204ENST00000553746 TBC1D12O60347 775 aa12.85□□□□□ -0.35
ATL1-204ENST00000553746 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATL1-204ENST00000553746 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
ATL1-204ENST00000553746 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
ATL1-204ENST00000553746 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
ATL1-204ENST00000553746 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
ATL1-204ENST00000553746 PDE4AP27815 886 aa12.8□□□□□ -0.36
ATL1-204ENST00000553746 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
ATL1-204ENST00000553746 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
ATL1-204ENST00000553746 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
ATL1-204ENST00000553746 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
ATL1-204ENST00000553746 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
ATL1-204ENST00000553746 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
ATL1-204ENST00000553746 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
ATL1-204ENST00000553746 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
ATL1-204ENST00000553746 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
ATL1-204ENST00000553746 MFSD10Q14728 455 aa12.68□□□□□ -0.38
ATL1-204ENST00000553746 TK2O00142 265 aa12.67□□□□□ -0.38
ATL1-204ENST00000553746 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
ATL1-204ENST00000553746 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
ATL1-204ENST00000553746 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
ATL1-204ENST00000553746 PSEN2P49810 448 aa12.63□□□□□ -0.39
ATL1-204ENST00000553746 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
ATL1-204ENST00000553746 HRO43593 1189 aa12.6□□□□□ -0.39
ATL1-204ENST00000553746 FOSBP53539 338 aa12.6□□□□□ -0.39
ATL1-204ENST00000553746 BBXQ8WY36 941 aaPredicted RBP12.6□□□□□ -0.39
ATL1-204ENST00000553746 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
ATL1-204ENST00000553746 CADPS2Q86UW7 1296 aa12.59□□□□□ -0.39
ATL1-204ENST00000553746 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
ATL1-204ENST00000553746 EVI5O60447 810 aa12.58□□□□□ -0.4
ATL1-204ENST00000553746 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
ATL1-204ENST00000553746 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
ATL1-204ENST00000553746 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
ATL1-204ENST00000553746 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
ATL1-204ENST00000553746 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
ATL1-204ENST00000553746 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
ATL1-204ENST00000553746 SLC4A5Q9BY07 1137 aa12.54□□□□□ -0.4
ATL1-204ENST00000553746 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
ATL1-204ENST00000553746 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
ATL1-204ENST00000553746 PTPREP23469 700 aa12.5□□□□□ -0.41
ATL1-204ENST00000553746 CAMK2BQ13554 666 aa12.5□□□□□ -0.41
ATL1-204ENST00000553746 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
ATL1-204ENST00000553746 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
ATL1-204ENST00000553746 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.41
ATL1-204ENST00000553746 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
ATL1-204ENST00000553746 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
ATL1-204ENST00000553746 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
ATL1-204ENST00000553746 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
ATL1-204ENST00000553746 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
ATL1-204ENST00000553746 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
ATL1-204ENST00000553746 PHF14O94880 888 aa12.41□□□□□ -0.42
ATL1-204ENST00000553746 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
ATL1-204ENST00000553746 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
ATL1-204ENST00000553746 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
ATL1-204ENST00000553746 DPYSL4O14531 572 aa12.37□□□□□ -0.43
ATL1-204ENST00000553746 PPP1R3GB7ZBB8 358 aa12.36□□□□□ -0.43
ATL1-204ENST00000553746 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
ATL1-204ENST00000553746 EPAS1Q99814 870 aa12.35□□□□□ -0.43
ATL1-204ENST00000553746 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
ATL1-204ENST00000553746 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms