RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 KIF3CO14782 793 aa11.77□□□□□ -0.53
NEMF-202ENST00000553696 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
NEMF-202ENST00000553696 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
NEMF-202ENST00000553696 C2orf72A6NCS6 295 aa11.73□□□□□ -0.53
NEMF-202ENST00000553696 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
NEMF-202ENST00000553696 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
NEMF-202ENST00000553696 POTEB3A0JP26 581 aa11.67□□□□□ -0.54
NEMF-202ENST00000553696 POTEBQ6S5H4 581 aa11.67□□□□□ -0.54
NEMF-202ENST00000553696 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
NEMF-202ENST00000553696 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
NEMF-202ENST00000553696 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
NEMF-202ENST00000553696 EMP3P54852 163 aa11.62□□□□□ -0.55
NEMF-202ENST00000553696 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
NEMF-202ENST00000553696 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
NEMF-202ENST00000553696 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
NEMF-202ENST00000553696 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
NEMF-202ENST00000553696 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
NEMF-202ENST00000553696 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
NEMF-202ENST00000553696 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
NEMF-202ENST00000553696 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
NEMF-202ENST00000553696 FOXK1P85037 733 aa11.57□□□□□ -0.56
NEMF-202ENST00000553696 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEMF-202ENST00000553696 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
NEMF-202ENST00000553696 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
NEMF-202ENST00000553696 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
NEMF-202ENST00000553696 DSG2Q14126 1118 aa11.56□□□□□ -0.56
NEMF-202ENST00000553696 SLC34A2O95436 690 aa11.54□□□□□ -0.56
NEMF-202ENST00000553696 ARSIQ5FYB1 569 aa11.54□□□□□ -0.56
NEMF-202ENST00000553696 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
NEMF-202ENST00000553696 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
NEMF-202ENST00000553696 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
NEMF-202ENST00000553696 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
NEMF-202ENST00000553696 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
NEMF-202ENST00000553696 ERBB3P21860 1342 aa11.46□□□□□ -0.57
NEMF-202ENST00000553696 PPP1R15BQ5SWA1 713 aa11.46□□□□□ -0.57
NEMF-202ENST00000553696 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
NEMF-202ENST00000553696 PTCD2Q8WV60 388 aaKnown RBP11.46□□□□□ -0.57
NEMF-202ENST00000553696 NUDT7P0C024 238 aa11.45□□□□□ -0.58
NEMF-202ENST00000553696 PDE4AP27815 886 aa11.45□□□□□ -0.58
NEMF-202ENST00000553696 MFSD10Q14728 455 aa11.45□□□□□ -0.58
NEMF-202ENST00000553696 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
NEMF-202ENST00000553696 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
NEMF-202ENST00000553696 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
NEMF-202ENST00000553696 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
NEMF-202ENST00000553696 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
NEMF-202ENST00000553696 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
NEMF-202ENST00000553696 OXER1Q8TDS5 423 aa11.4□□□□□ -0.58
NEMF-202ENST00000553696 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
NEMF-202ENST00000553696 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
NEMF-202ENST00000553696 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
NEMF-202ENST00000553696 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
NEMF-202ENST00000553696 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEMF-202ENST00000553696 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
NEMF-202ENST00000553696 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
NEMF-202ENST00000553696 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
NEMF-202ENST00000553696 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
NEMF-202ENST00000553696 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
NEMF-202ENST00000553696 TBC1D12O60347 775 aa11.28□□□□□ -0.6
NEMF-202ENST00000553696 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
NEMF-202ENST00000553696 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
NEMF-202ENST00000553696 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
NEMF-202ENST00000553696 EVI5O60447 810 aa11.22□□□□□ -0.61
NEMF-202ENST00000553696 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
NEMF-202ENST00000553696 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
NEMF-202ENST00000553696 DPYSL4O14531 572 aa11.19□□□□□ -0.62
NEMF-202ENST00000553696 PBX2P40425 430 aa11.19□□□□□ -0.62
NEMF-202ENST00000553696 ANKRD13DQ6ZTN6 518 aa11.19□□□□□ -0.62
NEMF-202ENST00000553696 FOSBP53539 338 aa11.18□□□□□ -0.62
NEMF-202ENST00000553696 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEMF-202ENST00000553696 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
NEMF-202ENST00000553696 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
NEMF-202ENST00000553696 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
NEMF-202ENST00000553696 PSEN2P49810 448 aa11.14□□□□□ -0.63
NEMF-202ENST00000553696 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
NEMF-202ENST00000553696 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
NEMF-202ENST00000553696 E2F4Q16254 413 aa11.13□□□□□ -0.63
NEMF-202ENST00000553696 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
NEMF-202ENST00000553696 PDIA6Q15084 440 aa11.1□□□□□ -0.63
NEMF-202ENST00000553696 ADAM33Q9BZ11 813 aa11.1□□□□□ -0.63
NEMF-202ENST00000553696 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
NEMF-202ENST00000553696 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
NEMF-202ENST00000553696 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
NEMF-202ENST00000553696 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
NEMF-202ENST00000553696 WDR70Q9NW82 654 aa11.09□□□□□ -0.63
NEMF-202ENST00000553696 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
NEMF-202ENST00000553696 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
NEMF-202ENST00000553696 PHF14O94880 888 aa11.05□□□□□ -0.64
NEMF-202ENST00000553696 PTGER2P43116 358 aa11.05□□□□□ -0.64
NEMF-202ENST00000553696 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
NEMF-202ENST00000553696 RNF166Q96A37 237 aaPredicted RBP11.05□□□□□ -0.64
NEMF-202ENST00000553696 TK2O00142 265 aa11.03□□□□□ -0.64
NEMF-202ENST00000553696 DDX12PQ92771 950 aa11.03□□□□□ -0.64
NEMF-202ENST00000553696 HRO43593 1189 aa11.02□□□□□ -0.65
NEMF-202ENST00000553696 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
NEMF-202ENST00000553696 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
NEMF-202ENST00000553696 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
NEMF-202ENST00000553696 PTPREP23469 700 aa11.01□□□□□ -0.65
NEMF-202ENST00000553696 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
NEMF-202ENST00000553696 EPAS1Q99814 870 aa10.99□□□□□ -0.65
NEMF-202ENST00000553696 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms