RNA–Protein interactions for RNA: ENST00000553595.5

RAD51B-216, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-216ENST00000553595 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
RAD51B-216ENST00000553595 ERCC6L2Q5T890 1561 aa9.88□□□□□ -0.83
RAD51B-216ENST00000553595 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
RAD51B-216ENST00000553595 SOX12O15370 315 aa9.84□□□□□ -0.83
RAD51B-216ENST00000553595 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
RAD51B-216ENST00000553595 HECW2Q9P2P5 1572 aa9.84□□□□□ -0.83
RAD51B-216ENST00000553595 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
RAD51B-216ENST00000553595 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
RAD51B-216ENST00000553595 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
RAD51B-216ENST00000553595 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
RAD51B-216ENST00000553595 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
RAD51B-216ENST00000553595 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
RAD51B-216ENST00000553595 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
RAD51B-216ENST00000553595 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
RAD51B-216ENST00000553595 NLRP6P59044 892 aa9.77□□□□□ -0.85
RAD51B-216ENST00000553595 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.85
RAD51B-216ENST00000553595 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
RAD51B-216ENST00000553595 WDR62O43379 1518 aa9.75□□□□□ -0.85
RAD51B-216ENST00000553595 NCAPD3P42695 1498 aa9.73□□□□□ -0.85
RAD51B-216ENST00000553595 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
RAD51B-216ENST00000553595 G3V3G9 751 aa9.72□□□□□ -0.85
RAD51B-216ENST00000553595 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
RAD51B-216ENST00000553595 LAMC3Q9Y6N6 1575 aa9.71□□□□□ -0.85
RAD51B-216ENST00000553595 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
RAD51B-216ENST00000553595 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.86
RAD51B-216ENST00000553595 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
RAD51B-216ENST00000553595 TMEM121BQ9BXQ6 578 aaPredicted RBP9.7□□□□□ -0.86
RAD51B-216ENST00000553595 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
RAD51B-216ENST00000553595 SYNJ2O15056 1496 aa9.68□□□□□ -0.86
RAD51B-216ENST00000553595 PDS5BQ9NTI5 1447 aa9.68□□□□□ -0.86
RAD51B-216ENST00000553595 PPP1R37O75864 691 aa9.66□□□□□ -0.86
RAD51B-216ENST00000553595 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
RAD51B-216ENST00000553595 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
RAD51B-216ENST00000553595 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
RAD51B-216ENST00000553595 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
RAD51B-216ENST00000553595 RYDENQ9NUL5 291 aaKnown RBP9.58□□□□□ -0.88
RAD51B-216ENST00000553595 CHD1O14646 1710 aa9.58□□□□□ -0.88
RAD51B-216ENST00000553595 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
RAD51B-216ENST00000553595 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
RAD51B-216ENST00000553595 KIF13AQ9H1H9 1805 aa9.56□□□□□ -0.88
RAD51B-216ENST00000553595 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
RAD51B-216ENST00000553595 LCE2DQ5TA82 110 aaPredicted RBP9.54□□□□□ -0.88
RAD51B-216ENST00000553595 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
RAD51B-216ENST00000553595 ADGRL1O94910 1474 aa9.53□□□□□ -0.88
RAD51B-216ENST00000553595 ZNF608Q9ULD9 1512 aaPredicted RBP9.52□□□□□ -0.88
RAD51B-216ENST00000553595 SNPHO15079 494 aa9.52□□□□□ -0.89
RAD51B-216ENST00000553595 C2orf72A6NCS6 295 aa9.5□□□□□ -0.89
RAD51B-216ENST00000553595 KIF3CO14782 793 aa9.5□□□□□ -0.89
RAD51B-216ENST00000553595 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
RAD51B-216ENST00000553595 ST18O60284 1047 aa9.49□□□□□ -0.89
RAD51B-216ENST00000553595 HOXB3P14651 431 aaPredicted RBP9.48□□□□□ -0.89
RAD51B-216ENST00000553595 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
RAD51B-216ENST00000553595 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
RAD51B-216ENST00000553595 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
RAD51B-216ENST00000553595 CEP164Q9UPV0 1460 aa9.44□□□□□ -0.9
RAD51B-216ENST00000553595 KDM6BO15054 1643 aa9.43□□□□□ -0.9
RAD51B-216ENST00000553595 POTEMA6NI47 508 aa9.43□□□□□ -0.9
RAD51B-216ENST00000553595 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
RAD51B-216ENST00000553595 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
RAD51B-216ENST00000553595 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
RAD51B-216ENST00000553595 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
RAD51B-216ENST00000553595 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
RAD51B-216ENST00000553595 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
RAD51B-216ENST00000553595 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.9
RAD51B-216ENST00000553595 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
RAD51B-216ENST00000553595 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
RAD51B-216ENST00000553595 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
RAD51B-216ENST00000553595 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
RAD51B-216ENST00000553595 URB2Q14146 1524 aaKnown RBP9.4□□□□□ -0.91
RAD51B-216ENST00000553595 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
RAD51B-216ENST00000553595 FOXK1P85037 733 aa9.39□□□□□ -0.91
RAD51B-216ENST00000553595 MARVELD3Q96A59 401 aa9.39□□□□□ -0.91
RAD51B-216ENST00000553595 DSG2Q14126 1118 aa9.38□□□□□ -0.91
RAD51B-216ENST00000553595 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
RAD51B-216ENST00000553595 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
RAD51B-216ENST00000553595 PDE4AP27815 886 aa9.37□□□□□ -0.91
RAD51B-216ENST00000553595 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
RAD51B-216ENST00000553595 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
RAD51B-216ENST00000553595 CLASP1Q7Z460 1538 aa9.36□□□□□ -0.91
RAD51B-216ENST00000553595 EIF4G3O43432 1585 aaKnown RBP9.35□□□□□ -0.91
RAD51B-216ENST00000553595 GPR153Q6NV75 609 aa9.35□□□□□ -0.91
RAD51B-216ENST00000553595 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
RAD51B-216ENST00000553595 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
RAD51B-216ENST00000553595 EMP3P54852 163 aa9.34□□□□□ -0.91
RAD51B-216ENST00000553595 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
RAD51B-216ENST00000553595 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
RAD51B-216ENST00000553595 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
RAD51B-216ENST00000553595 SLC34A2O95436 690 aa9.33□□□□□ -0.92
RAD51B-216ENST00000553595 ARSIQ5FYB1 569 aa9.33□□□□□ -0.92
RAD51B-216ENST00000553595 PPP1R15BQ5SWA1 713 aa9.33□□□□□ -0.92
RAD51B-216ENST00000553595 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
RAD51B-216ENST00000553595 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.922e-6■■■□□ 15.4
RAD51B-216ENST00000553595 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
RAD51B-216ENST00000553595 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
RAD51B-216ENST00000553595 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
RAD51B-216ENST00000553595 MFSD10Q14728 455 aa9.3□□□□□ -0.92
RAD51B-216ENST00000553595 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
RAD51B-216ENST00000553595 FAM205CA6NFA0 338 aa9.29□□□□□ -0.92
RAD51B-216ENST00000553595 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
RAD51B-216ENST00000553595 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms