RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
SDR39U1-205ENST00000553546 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
SDR39U1-205ENST00000553546 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
SDR39U1-205ENST00000553546 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
SDR39U1-205ENST00000553546 SCAPERQ9BY12 1400 aa24.58■■□□□ 1.53
SDR39U1-205ENST00000553546 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.52
SDR39U1-205ENST00000553546 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 SIGLEC1Q9BZZ2 1709 aa24.55■■□□□ 1.52
SDR39U1-205ENST00000553546 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
SDR39U1-205ENST00000553546 HSPA2P54652 639 aa24.51■■□□□ 1.51
SDR39U1-205ENST00000553546 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
SDR39U1-205ENST00000553546 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
SDR39U1-205ENST00000553546 PREX2Q70Z35 1606 aa24.47■■□□□ 1.51
SDR39U1-205ENST00000553546 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
SDR39U1-205ENST00000553546 KDM5CP41229 1560 aa24.43■■□□□ 1.5
SDR39U1-205ENST00000553546 ATP10AO60312 1499 aa24.42■■□□□ 1.5
SDR39U1-205ENST00000553546 FER1L4A9Z1Z3 1794 aa24.42■■□□□ 1.5
SDR39U1-205ENST00000553546 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
SDR39U1-205ENST00000553546 C9orf84Q5VXU9 1444 aa24.41■■□□□ 1.5
SDR39U1-205ENST00000553546 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
SDR39U1-205ENST00000553546 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
SDR39U1-205ENST00000553546 ABCC1P33527 1531 aa24.38■■□□□ 1.49
SDR39U1-205ENST00000553546 ILDR2Q71H61 639 aa24.36■■□□□ 1.49
SDR39U1-205ENST00000553546 ITSN2Q9NZM3 1697 aa24.35■■□□□ 1.49
SDR39U1-205ENST00000553546 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
SDR39U1-205ENST00000553546 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
SDR39U1-205ENST00000553546 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
SDR39U1-205ENST00000553546 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
SDR39U1-205ENST00000553546 MYT1LQ9UL68 1186 aa24.32■■□□□ 1.48
SDR39U1-205ENST00000553546 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
SDR39U1-205ENST00000553546 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
SDR39U1-205ENST00000553546 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 DISP3Q9P2K9 1392 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 MLECQ14165 292 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
SDR39U1-205ENST00000553546 GPATCH8Q9UKJ3 1502 aaKnown RBP24.29■■□□□ 1.48
SDR39U1-205ENST00000553546 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
SDR39U1-205ENST00000553546 STRCQ7RTU9 1775 aa24.26■■□□□ 1.47
SDR39U1-205ENST00000553546 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
SDR39U1-205ENST00000553546 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 SOCS7O14512 581 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 PLEKHH2Q8IVE3 1493 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
SDR39U1-205ENST00000553546 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
SDR39U1-205ENST00000553546 KIDINS220Q9ULH0 1771 aa24.22■■□□□ 1.47
SDR39U1-205ENST00000553546 AGLP35573 1532 aa24.22■■□□□ 1.47
SDR39U1-205ENST00000553546 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
SDR39U1-205ENST00000553546 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
SDR39U1-205ENST00000553546 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
SDR39U1-205ENST00000553546 SPAG9O60271 1321 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-205ENST00000553546 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
SDR39U1-205ENST00000553546 ATP7AQ04656 1500 aa24.13■■□□□ 1.45
SDR39U1-205ENST00000553546 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-205ENST00000553546 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-205ENST00000553546 SUPT6HQ7KZ85 1726 aaKnown RBP24.11■■□□□ 1.45
SDR39U1-205ENST00000553546 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
SDR39U1-205ENST00000553546 UHRF1BP1Q6BDS2 1440 aa24.1■■□□□ 1.45
SDR39U1-205ENST00000553546 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
SDR39U1-205ENST00000553546 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
SDR39U1-205ENST00000553546 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
SDR39U1-205ENST00000553546 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 C3P01024 1663 aa24.05■■□□□ 1.44
SDR39U1-205ENST00000553546 PLXNC1O60486 1568 aa24.04■■□□□ 1.44
SDR39U1-205ENST00000553546 A2MP01023 1474 aa24.03■■□□□ 1.44
SDR39U1-205ENST00000553546 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
SDR39U1-205ENST00000553546 PTPRTO14522 1441 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
SDR39U1-205ENST00000553546 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
SDR39U1-205ENST00000553546 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
SDR39U1-205ENST00000553546 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
SDR39U1-205ENST00000553546 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
SDR39U1-205ENST00000553546 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
SDR39U1-205ENST00000553546 IQSEC2Q5JU85 1478 aa23.96■■□□□ 1.43
SDR39U1-205ENST00000553546 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
SDR39U1-205ENST00000553546 NPATQ14207 1427 aa23.93■■□□□ 1.42
SDR39U1-205ENST00000553546 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
SDR39U1-205ENST00000553546 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
SDR39U1-205ENST00000553546 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
SDR39U1-205ENST00000553546 GGT6Q6P531 493 aa23.88■■□□□ 1.41
SDR39U1-205ENST00000553546 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 KANK4Q5T7N3 995 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms