RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 MTUS2Q5JR59 1369 aa22.74■■□□□ 1.23
ABCD4-218ENST00000553486 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
ABCD4-218ENST00000553486 HECW1Q76N89 1606 aa22.73■■□□□ 1.23
ABCD4-218ENST00000553486 AKNAQ7Z591 1439 aa22.73■■□□□ 1.23
ABCD4-218ENST00000553486 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
ABCD4-218ENST00000553486 DENND4BO75064 1496 aaPredicted RBP22.72■■□□□ 1.23
ABCD4-218ENST00000553486 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
ABCD4-218ENST00000553486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.69■■□□□ 1.22
ABCD4-218ENST00000553486 CFAP74Q9C0B2 1584 aa22.69■■□□□ 1.22
ABCD4-218ENST00000553486 EHBP1L1Q8N3D4 1523 aa22.69■■□□□ 1.22
ABCD4-218ENST00000553486 ITGAEP38570 1179 aa22.68■■□□□ 1.22
ABCD4-218ENST00000553486 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
ABCD4-218ENST00000553486 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
ABCD4-218ENST00000553486 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
ABCD4-218ENST00000553486 ARHGEF40Q8TER5 1519 aa22.66■■□□□ 1.22
ABCD4-218ENST00000553486 RICTORQ6R327 1708 aa22.66■■□□□ 1.22
ABCD4-218ENST00000553486 PTPRMP28827 1452 aa22.66■■□□□ 1.22
ABCD4-218ENST00000553486 ARID4BQ4LE39 1312 aaPredicted RBP22.66■■□□□ 1.22
ABCD4-218ENST00000553486 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
ABCD4-218ENST00000553486 PLCH2O75038 1416 aa22.63■■□□□ 1.21
ABCD4-218ENST00000553486 ZMYM4Q5VZL5 1548 aa22.62■■□□□ 1.21
ABCD4-218ENST00000553486 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
ABCD4-218ENST00000553486 BCORL1Q5H9F3 1711 aa22.62■■□□□ 1.21
ABCD4-218ENST00000553486 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
ABCD4-218ENST00000553486 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
ABCD4-218ENST00000553486 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
ABCD4-218ENST00000553486 ILDR1Q86SU0 546 aaPredicted RBP22.58■■□□□ 1.21
ABCD4-218ENST00000553486 MADDQ8WXG6 1647 aa22.58■■□□□ 1.2
ABCD4-218ENST00000553486 SCAPERQ9BY12 1400 aa22.58■■□□□ 1.2
ABCD4-218ENST00000553486 MAGI2Q86UL8 1455 aa22.57■■□□□ 1.2
ABCD4-218ENST00000553486 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
ABCD4-218ENST00000553486 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
ABCD4-218ENST00000553486 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
ABCD4-218ENST00000553486 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
ABCD4-218ENST00000553486 RAB3GAP2Q9H2M9 1393 aa22.56■■□□□ 1.2
ABCD4-218ENST00000553486 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
ABCD4-218ENST00000553486 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
ABCD4-218ENST00000553486 KIF14Q15058 1648 aa22.53■■□□□ 1.2
ABCD4-218ENST00000553486 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
ABCD4-218ENST00000553486 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
ABCD4-218ENST00000553486 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
ABCD4-218ENST00000553486 ARHGAP5Q13017 1502 aa22.46■■□□□ 1.19
ABCD4-218ENST00000553486 RIMS1Q86UR5 1692 aaKnown RBP22.46■■□□□ 1.19
ABCD4-218ENST00000553486 ZNF518AQ6AHZ1 1483 aa22.45■■□□□ 1.18
ABCD4-218ENST00000553486 LMTK3Q96Q04 1460 aa22.45■■□□□ 1.18
ABCD4-218ENST00000553486 ATP10AO60312 1499 aa22.44■■□□□ 1.18
ABCD4-218ENST00000553486 ZNF316A6NFI3 1004 aaPredicted RBP22.44■■□□□ 1.18
ABCD4-218ENST00000553486 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
ABCD4-218ENST00000553486 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
ABCD4-218ENST00000553486 MLECQ14165 292 aa22.42■■□□□ 1.18
ABCD4-218ENST00000553486 AFAP1Q8N556 730 aa22.41■■□□□ 1.18
ABCD4-218ENST00000553486 MIA2Q96PC5 1412 aa22.41■■□□□ 1.18
ABCD4-218ENST00000553486 KDM5CP41229 1560 aa22.4■■□□□ 1.18
ABCD4-218ENST00000553486 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
ABCD4-218ENST00000553486 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
ABCD4-218ENST00000553486 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
ABCD4-218ENST00000553486 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
ABCD4-218ENST00000553486 CDC42BPBQ9Y5S2 1711 aa22.36■■□□□ 1.17
ABCD4-218ENST00000553486 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
ABCD4-218ENST00000553486 DIEXFQ68CQ4 756 aaKnown RBP22.35■■□□□ 1.17
ABCD4-218ENST00000553486 FER1L4A9Z1Z3 1794 aa22.34■■□□□ 1.17
ABCD4-218ENST00000553486 ABCC1P33527 1531 aa22.32■■□□□ 1.16
ABCD4-218ENST00000553486 MLH3Q9UHC1 1453 aa22.32■■□□□ 1.16
ABCD4-218ENST00000553486 HSPA2P54652 639 aa22.31■■□□□ 1.16
ABCD4-218ENST00000553486 MYT1LQ9UL68 1186 aa22.31■■□□□ 1.16
ABCD4-218ENST00000553486 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
ABCD4-218ENST00000553486 DIP2CQ9Y2E4 1556 aa22.31■■□□□ 1.16
ABCD4-218ENST00000553486 NAIPQ13075 1403 aa22.28■■□□□ 1.16
ABCD4-218ENST00000553486 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
ABCD4-218ENST00000553486 ABCA6Q8N139 1617 aa22.27■■□□□ 1.15
ABCD4-218ENST00000553486 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
ABCD4-218ENST00000553486 FBXO41Q8TF61 875 aa22.25■■□□□ 1.15
ABCD4-218ENST00000553486 ITSN2Q9NZM3 1697 aa22.25■■□□□ 1.15
ABCD4-218ENST00000553486 GCC2Q8IWJ2 1684 aa22.24■■□□□ 1.15
ABCD4-218ENST00000553486 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
ABCD4-218ENST00000553486 GPATCH8Q9UKJ3 1502 aaKnown RBP22.24■■□□□ 1.15
ABCD4-218ENST00000553486 AGLP35573 1532 aa22.22■■□□□ 1.15
ABCD4-218ENST00000553486 ZNF777Q9ULD5 760 aaPredicted RBP22.22■■□□□ 1.15
ABCD4-218ENST00000553486 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
ABCD4-218ENST00000553486 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
ABCD4-218ENST00000553486 KIDINS220Q9ULH0 1771 aa22.19■■□□□ 1.14
ABCD4-218ENST00000553486 DNMT1P26358 1616 aaKnown RBP22.19■■□□□ 1.14
ABCD4-218ENST00000553486 SYCP2Q9BX26 1530 aa22.18■■□□□ 1.14
ABCD4-218ENST00000553486 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
ABCD4-218ENST00000553486 DAPK1P53355 1430 aa22.17■■□□□ 1.14
ABCD4-218ENST00000553486 PREX1Q8TCU6 1659 aa22.17■■□□□ 1.14
ABCD4-218ENST00000553486 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
ABCD4-218ENST00000553486 CFDP1Q9UEE9 299 aaPredicted RBP22.16■■□□□ 1.14
ABCD4-218ENST00000553486 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
ABCD4-218ENST00000553486 KIAA1107Q9UPP5 1409 aa22.15■■□□□ 1.14
ABCD4-218ENST00000553486 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
ABCD4-218ENST00000553486 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
ABCD4-218ENST00000553486 SPAG9O60271 1321 aaKnown RBP22.14■■□□□ 1.14
ABCD4-218ENST00000553486 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.13
ABCD4-218ENST00000553486 UHRF1BP1Q6BDS2 1440 aa22.13■■□□□ 1.13
ABCD4-218ENST00000553486 PLEKHH2Q8IVE3 1493 aa22.13■■□□□ 1.13
ABCD4-218ENST00000553486 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
ABCD4-218ENST00000553486 ABCC5O15440 1437 aa22.13■■□□□ 1.13
ABCD4-218ENST00000553486 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
ABCD4-218ENST00000553486 CAMSAP2Q08AD1 1489 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms