RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 LRRC9Q6ZRR7 1453 aa38.03■■■■□ 3.68
NR4A1-218ENST00000553200 RICTORQ6R327 1708 aa38.01■■■■□ 3.67
NR4A1-218ENST00000553200 RAPGEF3O95398 923 aa38■■■■□ 3.67
NR4A1-218ENST00000553200 GPATCH8Q9UKJ3 1502 aaKnown RBP38■■■■□ 3.67
NR4A1-218ENST00000553200 SUPT6HQ7KZ85 1726 aaKnown RBP37.99■■■■□ 3.67
NR4A1-218ENST00000553200 EFCAB2Q5VUJ9 269 aa37.99■■■■□ 3.67
NR4A1-218ENST00000553200 ADGRL1O94910 1474 aa37.98■■■■□ 3.67
NR4A1-218ENST00000553200 KANK4Q5T7N3 995 aaPredicted RBP37.98■■■■□ 3.67
NR4A1-218ENST00000553200 DENND4BO75064 1496 aaPredicted RBP37.96■■■■□ 3.67
NR4A1-218ENST00000553200 NCOA2Q15596 1464 aa37.93■■■■□ 3.66
NR4A1-218ENST00000553200 SCAPERQ9BY12 1400 aa37.93■■■■□ 3.66
NR4A1-218ENST00000553200 CCNB3Q8WWL7 1395 aa37.93■■■■□ 3.66
NR4A1-218ENST00000553200 SAMD9LQ8IVG5 1584 aa37.88■■■■□ 3.65
NR4A1-218ENST00000553200 ITSN2Q9NZM3 1697 aa37.88■■■■□ 3.65
NR4A1-218ENST00000553200 ABCC1P33527 1531 aa37.87■■■■□ 3.65
NR4A1-218ENST00000553200 POGZQ7Z3K3 1410 aa37.86■■■■□ 3.65
NR4A1-218ENST00000553200 APLP2Q06481 763 aa37.84■■■■□ 3.65
NR4A1-218ENST00000553200 ARHGEF12Q9NZN5 1544 aa37.83■■■■□ 3.65
NR4A1-218ENST00000553200 ZMYM4Q5VZL5 1548 aa37.81■■■■□ 3.64
NR4A1-218ENST00000553200 CFDP1Q9UEE9 299 aaPredicted RBP37.8■■■■□ 3.64
NR4A1-218ENST00000553200 ZNF777Q9ULD5 760 aaPredicted RBP37.8■■■■□ 3.64
NR4A1-218ENST00000553200 SYCP2Q9BX26 1530 aa37.75■■■■□ 3.63
NR4A1-218ENST00000553200 TRAPPC8Q9Y2L5 1435 aa37.74■■■■□ 3.63
NR4A1-218ENST00000553200 KDM5CP41229 1560 aa37.72■■■■□ 3.63
NR4A1-218ENST00000553200 ZNF518AQ6AHZ1 1483 aa37.72■■■■□ 3.63
NR4A1-218ENST00000553200 ARHGEF40Q8TER5 1519 aa37.71■■■■□ 3.63
NR4A1-218ENST00000553200 AFAP1Q8N556 730 aa37.71■■■■□ 3.63
NR4A1-218ENST00000553200 ZNF644Q9H582 1327 aaPredicted RBP37.7■■■■□ 3.63
NR4A1-218ENST00000553200 YEATS2Q9ULM3 1422 aa37.68■■■■□ 3.62
NR4A1-218ENST00000553200 ZFYVE16Q7Z3T8 1539 aa37.66■■■■□ 3.62
NR4A1-218ENST00000553200 HNRNPMP52272 730 aaKnown RBP eCLIP37.65■■■■□ 3.62
NR4A1-218ENST00000553200 KIAA1107Q9UPP5 1409 aa37.64■■■■□ 3.62
NR4A1-218ENST00000553200 MAGI2Q86UL8 1455 aa37.64■■■■□ 3.62
NR4A1-218ENST00000553200 PLEKHH2Q8IVE3 1493 aa37.64■■■■□ 3.62
NR4A1-218ENST00000553200 HECW2Q9P2P5 1572 aa37.63■■■■□ 3.61
NR4A1-218ENST00000553200 CAMSAP2Q08AD1 1489 aa37.61■■■■□ 3.61
NR4A1-218ENST00000553200 MYOM3Q5VTT5 1437 aa37.61■■■■□ 3.61
NR4A1-218ENST00000553200 SIGLEC1Q9BZZ2 1709 aa37.58■■■■□ 3.61
NR4A1-218ENST00000553200 MBD5Q9P267 1494 aa37.57■■■■□ 3.6
NR4A1-218ENST00000553200 KIDINS220Q9ULH0 1771 aa37.56■■■■□ 3.6
NR4A1-218ENST00000553200 MLH3Q9UHC1 1453 aa37.55■■■■□ 3.6
NR4A1-218ENST00000553200 KDM4FA0A1W2PPD8 638 aa37.54■■■■□ 3.6
NR4A1-218ENST00000553200 ABCA6Q8N139 1617 aa37.54■■■■□ 3.6
NR4A1-218ENST00000553200 DIP2CQ9Y2E4 1556 aa37.51■■■■□ 3.6
NR4A1-218ENST00000553200 MIA2Q96PC5 1412 aa37.51■■■■□ 3.59
NR4A1-218ENST00000553200 INO80Q9ULG1 1556 aaPredicted RBP37.47■■■■□ 3.59
NR4A1-218ENST00000553200 ATP10AO60312 1499 aa37.47■■■■□ 3.59
NR4A1-218ENST00000553200 MYT1LQ9UL68 1186 aa37.47■■■■□ 3.59
NR4A1-218ENST00000553200 PPARGC1BQ86YN6 1023 aaKnown RBP37.45■■■■□ 3.59
NR4A1-218ENST00000553200 PTPN23Q9H3S7 1636 aa37.44■■■■□ 3.58
NR4A1-218ENST00000553200 ARHGEF5Q12774 1597 aa37.43■■■■□ 3.58
NR4A1-218ENST00000553200 SPAG9O60271 1321 aaKnown RBP37.43■■■■□ 3.58
NR4A1-218ENST00000553200 ATP7AQ04656 1500 aa37.43■■■■□ 3.58
NR4A1-218ENST00000553200 C9orf84Q5VXU9 1444 aa37.43■■■■□ 3.58
NR4A1-218ENST00000553200 CCDC141Q6ZP82 1450 aa37.42■■■■□ 3.58
NR4A1-218ENST00000553200 FGD6Q6ZV73 1430 aa37.42■■■■□ 3.58
NR4A1-218ENST00000553200 BCORL1Q5H9F3 1711 aa37.41■■■■□ 3.58
NR4A1-218ENST00000553200 ARID4BQ4LE39 1312 aaPredicted RBP37.38■■■■□ 3.58
NR4A1-218ENST00000553200 REREQ9P2R6 1566 aa37.36■■■■□ 3.57
NR4A1-218ENST00000553200 ADAMTSL3P82987 1691 aa37.35■■■■□ 3.57
NR4A1-218ENST00000553200 TCOF1Q13428 1488 aaKnown RBP37.34■■■■□ 3.57
NR4A1-218ENST00000553200 RSPH4AQ5TD94 716 aa37.3■■■■□ 3.56
NR4A1-218ENST00000553200 RTEL1-TNFRSF6BF6WH68 1400 aa37.28■■■■□ 3.56
NR4A1-218ENST00000553200 ADGBQ8N7X0 1667 aa37.28■■■■□ 3.56
NR4A1-218ENST00000553200 MADDQ8WXG6 1647 aa37.26■■■■□ 3.56
NR4A1-218ENST00000553200 CROCC2H7BZ55 1655 aa37.25■■■■□ 3.55
NR4A1-218ENST00000553200 AEBP2Q6ZN18 517 aaPredicted RBP37.24■■■■□ 3.55
NR4A1-218ENST00000553200 MAST1Q9Y2H9 1570 aa37.24■■■■□ 3.55
NR4A1-218ENST00000553200 DNMT1P26358 1616 aaKnown RBP37.23■■■■□ 3.55
NR4A1-218ENST00000553200 PLXNC1O60486 1568 aa37.22■■■■□ 3.55
NR4A1-218ENST00000553200 AGLP35573 1532 aa37.21■■■■□ 3.55
NR4A1-218ENST00000553200 MLECQ14165 292 aa37.21■■■■□ 3.55
NR4A1-218ENST00000553200 A2MP01023 1474 aa37.2■■■■□ 3.55
NR4A1-218ENST00000553200 ABCC5O15440 1437 aa37.2■■■■□ 3.55
NR4A1-218ENST00000553200 TSPY4P0CV99 314 aa37.18■■■■□ 3.54
NR4A1-218ENST00000553200 TSPY10P0CW01 314 aa37.18■■■■□ 3.54
NR4A1-218ENST00000553200 RIMS1Q86UR5 1692 aaKnown RBP37.17■■■■□ 3.54
NR4A1-218ENST00000553200 DAPK1P53355 1430 aa37.17■■■■□ 3.54
NR4A1-218ENST00000553200 FER1L4A9Z1Z3 1794 aa37.17■■■■□ 3.54
NR4A1-218ENST00000553200 FAM50AQ14320 339 aaKnown RBP37.14■■■■□ 3.54
NR4A1-218ENST00000553200 SHANK2Q9UPX8 1470 aa37.13■■■■□ 3.53
NR4A1-218ENST00000553200 PTPRMP28827 1452 aa37.07■■■■□ 3.53
NR4A1-218ENST00000553200 DHX29Q7Z478 1369 aaKnown RBP37.07■■■■□ 3.53
NR4A1-218ENST00000553200 CHIC2Q9UKJ5 165 aa36.99■■■■□ 3.51
NR4A1-218ENST00000553200 PTPRKQ15262 1439 aa36.97■■■■□ 3.51
NR4A1-218ENST00000553200 RRBP1Q9P2E9 1410 aaKnown RBP36.96■■■■□ 3.51
NR4A1-218ENST00000553200 KIF15Q9NS87 1388 aa36.93■■■■□ 3.5
NR4A1-218ENST00000553200 DUOX2Q9NRD8 1548 aa36.93■■■■□ 3.5
NR4A1-218ENST00000553200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.92■■■■□ 3.5
NR4A1-218ENST00000553200 RRP7BPQ9NSQ0 103 aa36.92■■■■□ 3.5
NR4A1-218ENST00000553200 ADGRL2O95490 1459 aa36.92■■■■□ 3.5
NR4A1-218ENST00000553200 GGT6Q6P531 493 aa36.91■■■■□ 3.5
NR4A1-218ENST00000553200 KIF3BO15066 747 aa36.9■■■■□ 3.5
NR4A1-218ENST00000553200 EIF2AK4Q9P2K8 1649 aaKnown RBP36.89■■■■□ 3.5
NR4A1-218ENST00000553200 NCOA1Q15788 1441 aa36.89■■■■□ 3.5
NR4A1-218ENST00000553200 CLTCQ00610 1675 aaKnown RBP36.89■■■■□ 3.5
NR4A1-218ENST00000553200 PLPPR3Q6T4P5 718 aa36.88■■■■□ 3.49
NR4A1-218ENST00000553200 ANKRD30AQ9BXX3 1397 aa36.88■■■■□ 3.49
NR4A1-218ENST00000553200 C3P01024 1663 aa36.86■■■■□ 3.49
NR4A1-218ENST00000553200 RNF17Q9BXT8 1623 aaKnown RBP36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms