RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
LINC00661-207ENST00000552685 HSPA2P54652 639 aa16.35■□□□□ 0.21
LINC00661-207ENST00000552685 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
LINC00661-207ENST00000552685 PLCH2O75038 1416 aa16.33■□□□□ 0.2
LINC00661-207ENST00000552685 KIF14Q15058 1648 aa16.33■□□□□ 0.2
LINC00661-207ENST00000552685 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
LINC00661-207ENST00000552685 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
LINC00661-207ENST00000552685 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
LINC00661-207ENST00000552685 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
LINC00661-207ENST00000552685 FER1L4A9Z1Z3 1794 aa16.31■□□□□ 0.2
LINC00661-207ENST00000552685 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
LINC00661-207ENST00000552685 MLECQ14165 292 aa16.29■□□□□ 0.2
LINC00661-207ENST00000552685 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
LINC00661-207ENST00000552685 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
LINC00661-207ENST00000552685 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
LINC00661-207ENST00000552685 KDM5CP41229 1560 aa16.26■□□□□ 0.19
LINC00661-207ENST00000552685 ATP10AO60312 1499 aa16.25■□□□□ 0.19
LINC00661-207ENST00000552685 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
LINC00661-207ENST00000552685 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
LINC00661-207ENST00000552685 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
LINC00661-207ENST00000552685 CLIP1P30622 1438 aa16.22■□□□□ 0.19
LINC00661-207ENST00000552685 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
LINC00661-207ENST00000552685 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
LINC00661-207ENST00000552685 ABCA6Q8N139 1617 aa16.21■□□□□ 0.19
LINC00661-207ENST00000552685 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
LINC00661-207ENST00000552685 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.18
LINC00661-207ENST00000552685 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
LINC00661-207ENST00000552685 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
LINC00661-207ENST00000552685 ZNF518AQ6AHZ1 1483 aa16.18■□□□□ 0.18
LINC00661-207ENST00000552685 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
LINC00661-207ENST00000552685 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
LINC00661-207ENST00000552685 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
LINC00661-207ENST00000552685 ABCC1P33527 1531 aa16.16■□□□□ 0.18
LINC00661-207ENST00000552685 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
LINC00661-207ENST00000552685 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
LINC00661-207ENST00000552685 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
LINC00661-207ENST00000552685 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
LINC00661-207ENST00000552685 MLH3Q9UHC1 1453 aa16.13■□□□□ 0.17
LINC00661-207ENST00000552685 C3P01024 1663 aa16.13■□□□□ 0.17
LINC00661-207ENST00000552685 CDC42BPAQ5VT25 1732 aa16.13■□□□□ 0.17
LINC00661-207ENST00000552685 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
LINC00661-207ENST00000552685 KIDINS220Q9ULH0 1771 aa16.11■□□□□ 0.17
LINC00661-207ENST00000552685 AGLP35573 1532 aa16.11■□□□□ 0.17
LINC00661-207ENST00000552685 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
LINC00661-207ENST00000552685 UHRF1BP1Q6BDS2 1440 aa16.07■□□□□ 0.16
LINC00661-207ENST00000552685 LTBP4Q8N2S1 1624 aa16.07■□□□□ 0.16
LINC00661-207ENST00000552685 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
LINC00661-207ENST00000552685 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
LINC00661-207ENST00000552685 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
LINC00661-207ENST00000552685 HNRNPMP52272 730 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00661-207ENST00000552685 PTPRTO14522 1441 aa16.02■□□□□ 0.16
LINC00661-207ENST00000552685 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.16
LINC00661-207ENST00000552685 ILDR2Q71H61 639 aa16.02■□□□□ 0.16
LINC00661-207ENST00000552685 NCOA1Q15788 1441 aa16.02■□□□□ 0.15
LINC00661-207ENST00000552685 PLXNC1O60486 1568 aa16■□□□□ 0.15
LINC00661-207ENST00000552685 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
LINC00661-207ENST00000552685 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
LINC00661-207ENST00000552685 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
LINC00661-207ENST00000552685 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
LINC00661-207ENST00000552685 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
LINC00661-207ENST00000552685 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
LINC00661-207ENST00000552685 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
LINC00661-207ENST00000552685 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
LINC00661-207ENST00000552685 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
LINC00661-207ENST00000552685 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
LINC00661-207ENST00000552685 ATP7AQ04656 1500 aa15.95■□□□□ 0.14
LINC00661-207ENST00000552685 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
LINC00661-207ENST00000552685 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
LINC00661-207ENST00000552685 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
LINC00661-207ENST00000552685 NPATQ14207 1427 aa15.94■□□□□ 0.14
LINC00661-207ENST00000552685 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
LINC00661-207ENST00000552685 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
LINC00661-207ENST00000552685 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
LINC00661-207ENST00000552685 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
LINC00661-207ENST00000552685 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
LINC00661-207ENST00000552685 PLEKHH2Q8IVE3 1493 aa15.92■□□□□ 0.14
LINC00661-207ENST00000552685 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
LINC00661-207ENST00000552685 PTPRKQ15262 1439 aa15.92■□□□□ 0.14
LINC00661-207ENST00000552685 ZMYM3Q14202 1370 aa15.91■□□□□ 0.14
LINC00661-207ENST00000552685 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
LINC00661-207ENST00000552685 A2MP01023 1474 aa15.91■□□□□ 0.14
LINC00661-207ENST00000552685 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
LINC00661-207ENST00000552685 GGT6Q6P531 493 aa15.89■□□□□ 0.13
LINC00661-207ENST00000552685 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
LINC00661-207ENST00000552685 IQSEC2Q5JU85 1478 aa15.89■□□□□ 0.13
LINC00661-207ENST00000552685 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
LINC00661-207ENST00000552685 MBD5Q9P267 1494 aa15.88■□□□□ 0.13
LINC00661-207ENST00000552685 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
LINC00661-207ENST00000552685 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
LINC00661-207ENST00000552685 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
LINC00661-207ENST00000552685 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
LINC00661-207ENST00000552685 ADGBQ8N7X0 1667 aa15.85■□□□□ 0.13
LINC00661-207ENST00000552685 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
LINC00661-207ENST00000552685 SOCS7O14512 581 aa15.82■□□□□ 0.12
LINC00661-207ENST00000552685 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
LINC00661-207ENST00000552685 NEURL4Q96JN8 1562 aa15.82■□□□□ 0.12
LINC00661-207ENST00000552685 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
LINC00661-207ENST00000552685 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
LINC00661-207ENST00000552685 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
LINC00661-207ENST00000552685 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms