RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
SMARCC2-213ENST00000552627 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
SMARCC2-213ENST00000552627 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
SMARCC2-213ENST00000552627 PPP1R37O75864 691 aa10.72□□□□□ -0.69
SMARCC2-213ENST00000552627 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
SMARCC2-213ENST00000552627 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
SMARCC2-213ENST00000552627 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-213ENST00000552627 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
SMARCC2-213ENST00000552627 TMEM92Q6UXU6 159 aa10.6□□□□□ -0.71
SMARCC2-213ENST00000552627 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-213ENST00000552627 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
SMARCC2-213ENST00000552627 SNPHO15079 494 aa10.57□□□□□ -0.72
SMARCC2-213ENST00000552627 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
SMARCC2-213ENST00000552627 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
SMARCC2-213ENST00000552627 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
SMARCC2-213ENST00000552627 C2orf72A6NCS6 295 aa10.54□□□□□ -0.72
SMARCC2-213ENST00000552627 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
SMARCC2-213ENST00000552627 KIF3CO14782 793 aa10.52□□□□□ -0.73
SMARCC2-213ENST00000552627 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
SMARCC2-213ENST00000552627 GPHNQ9NQX3 736 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-213ENST00000552627 PDE4AP27815 886 aa10.47□□□□□ -0.73
SMARCC2-213ENST00000552627 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
SMARCC2-213ENST00000552627 ST18O60284 1047 aa10.46□□□□□ -0.73
SMARCC2-213ENST00000552627 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
SMARCC2-213ENST00000552627 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
SMARCC2-213ENST00000552627 FOXK1P85037 733 aa10.45□□□□□ -0.74
SMARCC2-213ENST00000552627 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
SMARCC2-213ENST00000552627 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
SMARCC2-213ENST00000552627 ZNF710Q8N1W2 664 aa10.44□□□□□ -0.74
SMARCC2-213ENST00000552627 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
SMARCC2-213ENST00000552627 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
SMARCC2-213ENST00000552627 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
SMARCC2-213ENST00000552627 DSG2Q14126 1118 aa10.42□□□□□ -0.74
SMARCC2-213ENST00000552627 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
SMARCC2-213ENST00000552627 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
SMARCC2-213ENST00000552627 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
SMARCC2-213ENST00000552627 PPP1R15BQ5SWA1 713 aa10.39□□□□□ -0.75
SMARCC2-213ENST00000552627 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
SMARCC2-213ENST00000552627 DDX27Q96GQ7 796 aaKnown RBP10.38□□□□□ -0.75
SMARCC2-213ENST00000552627 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
SMARCC2-213ENST00000552627 MROH2BQ7Z745 1585 aa10.38□□□□□ -0.75
SMARCC2-213ENST00000552627 SLC34A2O95436 690 aa10.37□□□□□ -0.75
SMARCC2-213ENST00000552627 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
SMARCC2-213ENST00000552627 MFSD10Q14728 455 aa10.35□□□□□ -0.75
SMARCC2-213ENST00000552627 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
SMARCC2-213ENST00000552627 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
SMARCC2-213ENST00000552627 POTEMA6NI47 508 aa10.34□□□□□ -0.75
SMARCC2-213ENST00000552627 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
SMARCC2-213ENST00000552627 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
SMARCC2-213ENST00000552627 ATAD2BQ9ULI0 1458 aa10.34□□□□□ -0.75
SMARCC2-213ENST00000552627 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
SMARCC2-213ENST00000552627 EMP3P54852 163 aa10.32□□□□□ -0.76
SMARCC2-213ENST00000552627 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
SMARCC2-213ENST00000552627 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
SMARCC2-213ENST00000552627 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
SMARCC2-213ENST00000552627 WIZO95785 1651 aa10.3□□□□□ -0.76
SMARCC2-213ENST00000552627 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
SMARCC2-213ENST00000552627 TBC1D12O60347 775 aa10.29□□□□□ -0.76
SMARCC2-213ENST00000552627 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
SMARCC2-213ENST00000552627 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
SMARCC2-213ENST00000552627 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMARCC2-213ENST00000552627 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
SMARCC2-213ENST00000552627 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCC2-213ENST00000552627 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
SMARCC2-213ENST00000552627 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-213ENST00000552627 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
SMARCC2-213ENST00000552627 NUDT7P0C024 238 aa10.25□□□□□ -0.77
SMARCC2-213ENST00000552627 ERBB3P21860 1342 aa10.25□□□□□ -0.77
SMARCC2-213ENST00000552627 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
SMARCC2-213ENST00000552627 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
SMARCC2-213ENST00000552627 CAMK2BQ13554 666 aa10.23□□□□□ -0.77
SMARCC2-213ENST00000552627 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
SMARCC2-213ENST00000552627 MAP3K9P80192 1104 aa10.21□□□□□ -0.77
SMARCC2-213ENST00000552627 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
SMARCC2-213ENST00000552627 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-213ENST00000552627 E2F4Q16254 413 aa10.2□□□□□ -0.78
SMARCC2-213ENST00000552627 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-213ENST00000552627 KDM4FA0A1W2PPD8 638 aa10.19□□□□□ -0.78
SMARCC2-213ENST00000552627 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
SMARCC2-213ENST00000552627 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
SMARCC2-213ENST00000552627 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
SMARCC2-213ENST00000552627 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
SMARCC2-213ENST00000552627 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
SMARCC2-213ENST00000552627 EVI5O60447 810 aa10.16□□□□□ -0.78
SMARCC2-213ENST00000552627 DPYSL4O14531 572 aa10.15□□□□□ -0.78
SMARCC2-213ENST00000552627 TOP2AP11388 1531 aaKnown RBP10.15□□□□□ -0.78
SMARCC2-213ENST00000552627 ANO8Q9HCE9 1232 aaPredicted RBP10.14□□□□□ -0.79
SMARCC2-213ENST00000552627 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
SMARCC2-213ENST00000552627 NESP48681 1621 aa10.13□□□□□ -0.79
SMARCC2-213ENST00000552627 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
SMARCC2-213ENST00000552627 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-213ENST00000552627 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
SMARCC2-213ENST00000552627 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
SMARCC2-213ENST00000552627 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
SMARCC2-213ENST00000552627 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
SMARCC2-213ENST00000552627 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
SMARCC2-213ENST00000552627 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
SMARCC2-213ENST00000552627 FOSBP53539 338 aa10.05□□□□□ -0.8
SMARCC2-213ENST00000552627 PDIA6Q15084 440 aa10.05□□□□□ -0.8
SMARCC2-213ENST00000552627 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms