RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
CBX5-205ENST00000552562 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
CBX5-205ENST00000552562 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
CBX5-205ENST00000552562 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
CBX5-205ENST00000552562 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
CBX5-205ENST00000552562 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
CBX5-205ENST00000552562 ABCC10Q5T3U5 1492 aa12.44□□□□□ -0.42
CBX5-205ENST00000552562 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
CBX5-205ENST00000552562 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
CBX5-205ENST00000552562 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
CBX5-205ENST00000552562 DIP2BQ9P265 1576 aa12.41□□□□□ -0.42
CBX5-205ENST00000552562 CFAP43Q8NDM7 1665 aa12.41□□□□□ -0.42
CBX5-205ENST00000552562 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
CBX5-205ENST00000552562 KIF14Q15058 1648 aa12.39□□□□□ -0.43
CBX5-205ENST00000552562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
CBX5-205ENST00000552562 GLI2P10070 1586 aa12.37□□□□□ -0.43
CBX5-205ENST00000552562 CD109Q6YHK3 1445 aa12.37□□□□□ -0.43
CBX5-205ENST00000552562 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
CBX5-205ENST00000552562 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
CBX5-205ENST00000552562 CCNB3Q8WWL7 1395 aa12.34□□□□□ -0.43
CBX5-205ENST00000552562 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.43
CBX5-205ENST00000552562 PLCH2O75038 1416 aa12.32□□□□□ -0.44
CBX5-205ENST00000552562 KIF13AQ9H1H9 1805 aa12.32□□□□□ -0.44
CBX5-205ENST00000552562 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
CBX5-205ENST00000552562 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
CBX5-205ENST00000552562 MAP3K4Q9Y6R4 1608 aa12.31□□□□□ -0.44
CBX5-205ENST00000552562 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
CBX5-205ENST00000552562 POLA2Q14181 598 aa12.3□□□□□ -0.44
CBX5-205ENST00000552562 CFDP1Q9UEE9 299 aaPredicted RBP12.3□□□□□ -0.44
CBX5-205ENST00000552562 ZNF777Q9ULD5 760 aaPredicted RBP12.3□□□□□ -0.44
CBX5-205ENST00000552562 SUPT6HQ7KZ85 1726 aaKnown RBP12.3□□□□□ -0.44
CBX5-205ENST00000552562 ARHGAP5Q13017 1502 aa12.29□□□□□ -0.44
CBX5-205ENST00000552562 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
CBX5-205ENST00000552562 FANCAO15360 1455 aa12.27□□□□□ -0.44
CBX5-205ENST00000552562 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
CBX5-205ENST00000552562 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
CBX5-205ENST00000552562 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.45
CBX5-205ENST00000552562 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
CBX5-205ENST00000552562 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
CBX5-205ENST00000552562 PREX2Q70Z35 1606 aa12.25□□□□□ -0.45
CBX5-205ENST00000552562 PPRC1Q5VV67 1664 aaKnown RBP12.25□□□□□ -0.45
CBX5-205ENST00000552562 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
CBX5-205ENST00000552562 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
CBX5-205ENST00000552562 NEO1Q92859 1461 aa12.24□□□□□ -0.45
CBX5-205ENST00000552562 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
CBX5-205ENST00000552562 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
CBX5-205ENST00000552562 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
CBX5-205ENST00000552562 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
CBX5-205ENST00000552562 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
CBX5-205ENST00000552562 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
CBX5-205ENST00000552562 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
CBX5-205ENST00000552562 FAM50AQ14320 339 aaKnown RBP12.22□□□□□ -0.45
CBX5-205ENST00000552562 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
CBX5-205ENST00000552562 CDC42BPBQ9Y5S2 1711 aa12.21□□□□□ -0.45
CBX5-205ENST00000552562 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
CBX5-205ENST00000552562 SAMD9LQ8IVG5 1584 aa12.21□□□□□ -0.46
CBX5-205ENST00000552562 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
CBX5-205ENST00000552562 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
CBX5-205ENST00000552562 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
CBX5-205ENST00000552562 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
CBX5-205ENST00000552562 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
CBX5-205ENST00000552562 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
CBX5-205ENST00000552562 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
CBX5-205ENST00000552562 ABCC1P33527 1531 aa12.18□□□□□ -0.46
CBX5-205ENST00000552562 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
CBX5-205ENST00000552562 DENND4BO75064 1496 aaPredicted RBP12.18□□□□□ -0.46
CBX5-205ENST00000552562 TRAPPC8Q9Y2L5 1435 aa12.18□□□□□ -0.46
CBX5-205ENST00000552562 PTPN23Q9H3S7 1636 aa12.17□□□□□ -0.46
CBX5-205ENST00000552562 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
CBX5-205ENST00000552562 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
CBX5-205ENST00000552562 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
CBX5-205ENST00000552562 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
CBX5-205ENST00000552562 ITGAEP38570 1179 aa12.16□□□□□ -0.46
CBX5-205ENST00000552562 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
CBX5-205ENST00000552562 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
CBX5-205ENST00000552562 KDM6BO15054 1643 aa12.15□□□□□ -0.46
CBX5-205ENST00000552562 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
CBX5-205ENST00000552562 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
CBX5-205ENST00000552562 ZNF518AQ6AHZ1 1483 aa12.13□□□□□ -0.47
CBX5-205ENST00000552562 ABCC5O15440 1437 aa12.12□□□□□ -0.47
CBX5-205ENST00000552562 RSPH4AQ5TD94 716 aa12.12□□□□□ -0.47
CBX5-205ENST00000552562 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
CBX5-205ENST00000552562 FRMPD1Q5SYB0 1578 aa12.12□□□□□ -0.47
CBX5-205ENST00000552562 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
CBX5-205ENST00000552562 DAPK1P53355 1430 aa12.11□□□□□ -0.47
CBX5-205ENST00000552562 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
CBX5-205ENST00000552562 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
CBX5-205ENST00000552562 CHIC2Q9UKJ5 165 aa12.11□□□□□ -0.47
CBX5-205ENST00000552562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
CBX5-205ENST00000552562 ARHGEF5Q12774 1597 aa12.09□□□□□ -0.47
CBX5-205ENST00000552562 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
CBX5-205ENST00000552562 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
CBX5-205ENST00000552562 KDM5CP41229 1560 aa12.09□□□□□ -0.47
CBX5-205ENST00000552562 C9orf84Q5VXU9 1444 aa12.08□□□□□ -0.48
CBX5-205ENST00000552562 RICTORQ6R327 1708 aa12.08□□□□□ -0.48
CBX5-205ENST00000552562 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
CBX5-205ENST00000552562 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
CBX5-205ENST00000552562 ZMYM4Q5VZL5 1548 aa12.06□□□□□ -0.48
CBX5-205ENST00000552562 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
CBX5-205ENST00000552562 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms