RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
USP44-208ENST00000552440 FAM205CA6NFA0 338 aa8.73□□□□□ -1.01
USP44-208ENST00000552440 HS3ST6Q96QI5 342 aa8.73□□□□□ -1.01
USP44-208ENST00000552440 ERBB3P21860 1342 aa8.71□□□□□ -1.01
USP44-208ENST00000552440 RGL2O15211 777 aa8.71□□□□□ -1.01
USP44-208ENST00000552440 MFRPQ9BY79 579 aa8.71□□□□□ -1.01
USP44-208ENST00000552440 SPNS2Q8IVW8 549 aa8.68□□□□□ -1.02
USP44-208ENST00000552440 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
USP44-208ENST00000552440 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
USP44-208ENST00000552440 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
USP44-208ENST00000552440 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
USP44-208ENST00000552440 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
USP44-208ENST00000552440 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
USP44-208ENST00000552440 POTEB3A0JP26 581 aa8.61□□□□□ -1.03
USP44-208ENST00000552440 KIF3CO14782 793 aa8.61□□□□□ -1.03
USP44-208ENST00000552440 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
USP44-208ENST00000552440 POTEBQ6S5H4 581 aa8.61□□□□□ -1.03
USP44-208ENST00000552440 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
USP44-208ENST00000552440 SLC34A2O95436 690 aa8.6□□□□□ -1.03
USP44-208ENST00000552440 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
USP44-208ENST00000552440 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
USP44-208ENST00000552440 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
USP44-208ENST00000552440 PTGER2P43116 358 aa8.58□□□□□ -1.04
USP44-208ENST00000552440 ARSIQ5FYB1 569 aa8.58□□□□□ -1.04
USP44-208ENST00000552440 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
USP44-208ENST00000552440 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
USP44-208ENST00000552440 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
USP44-208ENST00000552440 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
USP44-208ENST00000552440 PBX2P40425 430 aa8.53□□□□□ -1.04
USP44-208ENST00000552440 TBC1D12O60347 775 aa8.52□□□□□ -1.04
USP44-208ENST00000552440 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.05
USP44-208ENST00000552440 PPP1R37O75864 691 aa8.5□□□□□ -1.05
USP44-208ENST00000552440 GPHNQ9NQX3 736 aaPredicted RBP8.5□□□□□ -1.05
USP44-208ENST00000552440 FOXK1P85037 733 aa8.5□□□□□ -1.05
USP44-208ENST00000552440 NUDT7P0C024 238 aa8.47□□□□□ -1.05
USP44-208ENST00000552440 PTCD2Q8WV60 388 aaKnown RBP8.47□□□□□ -1.05
USP44-208ENST00000552440 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
USP44-208ENST00000552440 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.06
USP44-208ENST00000552440 PLPP6Q8IY26 295 aa8.45□□□□□ -1.06
USP44-208ENST00000552440 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP44-208ENST00000552440 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP44-208ENST00000552440 LHX6Q9UPM6 363 aa8.44□□□□□ -1.06
USP44-208ENST00000552440 ANKRD13DQ6ZTN6 518 aa8.43□□□□□ -1.06
USP44-208ENST00000552440 PDE4AP27815 886 aa8.42□□□□□ -1.06
USP44-208ENST00000552440 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
USP44-208ENST00000552440 ARHGAP33O14559 1287 aa8.4□□□□□ -1.07
USP44-208ENST00000552440 DSG2Q14126 1118 aa8.4□□□□□ -1.07
USP44-208ENST00000552440 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.07
USP44-208ENST00000552440 NKX1-1Q15270 411 aaPredicted RBP8.39□□□□□ -1.07
USP44-208ENST00000552440 KDM4FA0A1W2PPD8 638 aa8.37□□□□□ -1.07
USP44-208ENST00000552440 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
USP44-208ENST00000552440 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
USP44-208ENST00000552440 TK2O00142 265 aa8.36□□□□□ -1.07
USP44-208ENST00000552440 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
USP44-208ENST00000552440 OXER1Q8TDS5 423 aa8.34□□□□□ -1.07
USP44-208ENST00000552440 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
USP44-208ENST00000552440 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
USP44-208ENST00000552440 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
USP44-208ENST00000552440 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
USP44-208ENST00000552440 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
USP44-208ENST00000552440 HCSTQ9UBK5 93 aa8.3□□□□□ -1.08
USP44-208ENST00000552440 AXIN2Q9Y2T1 843 aa8.3□□□□□ -1.08
USP44-208ENST00000552440 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
USP44-208ENST00000552440 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
USP44-208ENST00000552440 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
USP44-208ENST00000552440 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
USP44-208ENST00000552440 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
USP44-208ENST00000552440 MFSD10Q14728 455 aa8.26□□□□□ -1.09
USP44-208ENST00000552440 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
USP44-208ENST00000552440 ZNF454Q8N9F8 522 aa8.26□□□□□ -1.09
USP44-208ENST00000552440 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
USP44-208ENST00000552440 BCL2L12Q9HB09 334 aa8.25□□□□□ -1.09
USP44-208ENST00000552440 EVI5O60447 810 aa8.24□□□□□ -1.09
USP44-208ENST00000552440 PTPREP23469 700 aa8.24□□□□□ -1.09
USP44-208ENST00000552440 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
USP44-208ENST00000552440 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
USP44-208ENST00000552440 PSEN2P49810 448 aa8.23□□□□□ -1.09
USP44-208ENST00000552440 FOSBP53539 338 aa8.23□□□□□ -1.09
USP44-208ENST00000552440 BBXQ8WY36 941 aaPredicted RBP8.23□□□□□ -1.09
USP44-208ENST00000552440 HRO43593 1189 aa8.22□□□□□ -1.09
USP44-208ENST00000552440 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
USP44-208ENST00000552440 ZDHHC16Q969W1 377 aa8.21□□□□□ -1.1
USP44-208ENST00000552440 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.1
USP44-208ENST00000552440 VPS9D1Q9Y2B5 631 aa8.19□□□□□ -1.1
USP44-208ENST00000552440 FBXW7Q969H0 707 aa8.19□□□□□ -1.1
USP44-208ENST00000552440 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.19□□□□□ -1.1
USP44-208ENST00000552440 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
USP44-208ENST00000552440 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
USP44-208ENST00000552440 HAP1P54257 671 aaPredicted RBP8.16□□□□□ -1.1
USP44-208ENST00000552440 PLA2G2EQ9NZK7 142 aa8.15□□□□□ -1.1
USP44-208ENST00000552440 PHF14O94880 888 aa8.15□□□□□ -1.11
USP44-208ENST00000552440 KCTD12Q96CX2 325 aaKnown RBP8.15□□□□□ -1.11
USP44-208ENST00000552440 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
USP44-208ENST00000552440 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
USP44-208ENST00000552440 EPAS1Q99814 870 aa8.14□□□□□ -1.11
USP44-208ENST00000552440 CAMK2BQ13554 666 aa8.13□□□□□ -1.11
USP44-208ENST00000552440 MRPL50Q8N5N7 158 aaKnown RBP8.13□□□□□ -1.11
USP44-208ENST00000552440 ZBED2Q9BTP6 218 aa8.13□□□□□ -1.11
USP44-208ENST00000552440 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
USP44-208ENST00000552440 PPP1R3GB7ZBB8 358 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms