RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 HOXB1P14653 301 aaPredicted RBP14.14□□□□□ -0.15
USP15-218ENST00000552346 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
USP15-218ENST00000552346 MFRPQ9BY79 579 aa14.14□□□□□ -0.15
USP15-218ENST00000552346 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
USP15-218ENST00000552346 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
USP15-218ENST00000552346 ERBB3P21860 1342 aa14.05□□□□□ -0.16
USP15-218ENST00000552346 MMRN1Q13201 1228 aa14.04□□□□□ -0.16
USP15-218ENST00000552346 KRTAP3-3Q9BYR6 98 aa14.04□□□□□ -0.16
USP15-218ENST00000552346 KRTAP3-2Q9BYR7 98 aa14.04□□□□□ -0.16
USP15-218ENST00000552346 ZSWIM6Q9HCJ5 1215 aa14.04□□□□□ -0.16
USP15-218ENST00000552346 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
USP15-218ENST00000552346 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
USP15-218ENST00000552346 C2orf72A6NCS6 295 aa13.93□□□□□ -0.18
USP15-218ENST00000552346 KIF3CO14782 793 aa13.93□□□□□ -0.18
USP15-218ENST00000552346 ARSIQ5FYB1 569 aa13.93□□□□□ -0.18
USP15-218ENST00000552346 PPP1R37O75864 691 aa13.89□□□□□ -0.19
USP15-218ENST00000552346 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
USP15-218ENST00000552346 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
USP15-218ENST00000552346 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■□□ 19.2
USP15-218ENST00000552346 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
USP15-218ENST00000552346 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
USP15-218ENST00000552346 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
USP15-218ENST00000552346 SLC34A2O95436 690 aa13.78□□□□□ -0.2
USP15-218ENST00000552346 NUDT7P0C024 238 aa13.77□□□□□ -0.21
USP15-218ENST00000552346 PCDHGA4Q9Y5G9 962 aa13.76□□□□□ -0.21
USP15-218ENST00000552346 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
USP15-218ENST00000552346 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
USP15-218ENST00000552346 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
USP15-218ENST00000552346 FOXK1P85037 733 aa13.67□□□□□ -0.22
USP15-218ENST00000552346 RNF166Q96A37 237 aaPredicted RBP13.67□□□□□ -0.22
USP15-218ENST00000552346 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
USP15-218ENST00000552346 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
USP15-218ENST00000552346 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
USP15-218ENST00000552346 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
USP15-218ENST00000552346 RYDENQ9NUL5 291 aaKnown RBP13.65□□□□□ -0.22
USP15-218ENST00000552346 LSM11P83369 360 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP15-218ENST00000552346 DSG2Q14126 1118 aa13.62□□□□□ -0.23
USP15-218ENST00000552346 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
USP15-218ENST00000552346 PBX2P40425 430 aa13.61□□□□□ -0.23
USP15-218ENST00000552346 PTGER2P43116 358 aa13.61□□□□□ -0.23
USP15-218ENST00000552346 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
USP15-218ENST00000552346 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
USP15-218ENST00000552346 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
USP15-218ENST00000552346 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
USP15-218ENST00000552346 TBC1D12O60347 775 aa13.55□□□□□ -0.24
USP15-218ENST00000552346 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
USP15-218ENST00000552346 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
USP15-218ENST00000552346 ARHGAP33O14559 1287 aa13.5□□□□□ -0.25
USP15-218ENST00000552346 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
USP15-218ENST00000552346 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
USP15-218ENST00000552346 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP15-218ENST00000552346 PPP4R3BQ5MIZ7 849 aa13.46□□□□□ -0.25
USP15-218ENST00000552346 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
USP15-218ENST00000552346 PDE4AP27815 886 aa13.45□□□□□ -0.26
USP15-218ENST00000552346 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
USP15-218ENST00000552346 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
USP15-218ENST00000552346 PSEN2P49810 448 aa13.42□□□□□ -0.26
USP15-218ENST00000552346 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
USP15-218ENST00000552346 TK2O00142 265 aa13.37□□□□□ -0.27
USP15-218ENST00000552346 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
USP15-218ENST00000552346 ZNF454Q8N9F8 522 aa13.35□□□□□ -0.27
USP15-218ENST00000552346 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
USP15-218ENST00000552346 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
USP15-218ENST00000552346 KCNK17Q96T54 332 aa13.34□□□□□ -0.27
USP15-218ENST00000552346 HRO43593 1189 aa13.31□□□□□ -0.28
USP15-218ENST00000552346 MFSD10Q14728 455 aa13.3□□□□□ -0.28
USP15-218ENST00000552346 EVI5O60447 810 aa13.29□□□□□ -0.28
USP15-218ENST00000552346 FOSBP53539 338 aa13.28□□□□□ -0.28
USP15-218ENST00000552346 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
USP15-218ENST00000552346 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
USP15-218ENST00000552346 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
USP15-218ENST00000552346 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
USP15-218ENST00000552346 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
USP15-218ENST00000552346 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
USP15-218ENST00000552346 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
USP15-218ENST00000552346 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
USP15-218ENST00000552346 VPS9D1Q9Y2B5 631 aa13.23□□□□□ -0.29
USP15-218ENST00000552346 PTPREP23469 700 aa13.22□□□□□ -0.29
USP15-218ENST00000552346 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
USP15-218ENST00000552346 ZDHHC16Q969W1 377 aa13.2□□□□□ -0.3
USP15-218ENST00000552346 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
USP15-218ENST00000552346 ADAM33Q9BZ11 813 aa13.18□□□□□ -0.3
USP15-218ENST00000552346 PLA2G2EQ9NZK7 142 aa13.17□□□□□ -0.3
USP15-218ENST00000552346 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
USP15-218ENST00000552346 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
USP15-218ENST00000552346 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
USP15-218ENST00000552346 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
USP15-218ENST00000552346 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
USP15-218ENST00000552346 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
USP15-218ENST00000552346 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
USP15-218ENST00000552346 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
USP15-218ENST00000552346 PHF14O94880 888 aa13.07□□□□□ -0.32
USP15-218ENST00000552346 PTPN5P54829 565 aa13.07□□□□□ -0.32
USP15-218ENST00000552346 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
USP15-218ENST00000552346 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
USP15-218ENST00000552346 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
USP15-218ENST00000552346 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
USP15-218ENST00000552346 DPYSL4O14531 572 aa13.05□□□□□ -0.32
USP15-218ENST00000552346 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
USP15-218ENST00000552346 THSD4Q6ZMP0 1018 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms