RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
CALCOCO1-220ENST00000552282 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
CALCOCO1-220ENST00000552282 RIMS1Q86UR5 1692 aaKnown RBP26.63■■□□□ 1.85
CALCOCO1-220ENST00000552282 ILDR1Q86SU0 546 aaPredicted RBP26.62■■□□□ 1.85
CALCOCO1-220ENST00000552282 KDM5CP41229 1560 aa26.62■■□□□ 1.85
CALCOCO1-220ENST00000552282 CLIP1P30622 1438 aa26.61■■□□□ 1.85
CALCOCO1-220ENST00000552282 LMTK3Q96Q04 1460 aa26.61■■□□□ 1.85
CALCOCO1-220ENST00000552282 CCDC18Q5T9S5 1454 aa26.6■■□□□ 1.85
CALCOCO1-220ENST00000552282 CASKIN1Q8WXD9 1431 aa26.59■■□□□ 1.85
CALCOCO1-220ENST00000552282 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
CALCOCO1-220ENST00000552282 ZNF518AQ6AHZ1 1483 aa26.58■■□□□ 1.85
CALCOCO1-220ENST00000552282 EFCAB2Q5VUJ9 269 aa26.58■■□□□ 1.85
CALCOCO1-220ENST00000552282 C9orf84Q5VXU9 1444 aa26.55■■□□□ 1.84
CALCOCO1-220ENST00000552282 ATP10AO60312 1499 aa26.55■■□□□ 1.84
CALCOCO1-220ENST00000552282 ARHGEF12Q9NZN5 1544 aa26.55■■□□□ 1.84
CALCOCO1-220ENST00000552282 PREX2Q70Z35 1606 aa26.54■■□□□ 1.84
CALCOCO1-220ENST00000552282 CDC42BPBQ9Y5S2 1711 aa26.54■■□□□ 1.84
CALCOCO1-220ENST00000552282 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
CALCOCO1-220ENST00000552282 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
CALCOCO1-220ENST00000552282 ARHGAP5Q13017 1502 aa26.53■■□□□ 1.84
CALCOCO1-220ENST00000552282 FYCO1Q9BQS8 1478 aa26.52■■□□□ 1.84
CALCOCO1-220ENST00000552282 ATP1B4Q9UN42 357 aaPredicted RBP26.48■■□□□ 1.83
CALCOCO1-220ENST00000552282 ABCC1P33527 1531 aa26.48■■□□□ 1.83
CALCOCO1-220ENST00000552282 EHMT2Q96KQ7 1210 aa26.47■■□□□ 1.83
CALCOCO1-220ENST00000552282 MLH3Q9UHC1 1453 aa26.47■■□□□ 1.83
CALCOCO1-220ENST00000552282 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
CALCOCO1-220ENST00000552282 ITSN2Q9NZM3 1697 aa26.43■■□□□ 1.82
CALCOCO1-220ENST00000552282 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
CALCOCO1-220ENST00000552282 ABCA6Q8N139 1617 aa26.4■■□□□ 1.82
CALCOCO1-220ENST00000552282 AGLP35573 1532 aa26.39■■□□□ 1.82
CALCOCO1-220ENST00000552282 PREX1Q8TCU6 1659 aa26.36■■□□□ 1.81
CALCOCO1-220ENST00000552282 AFAP1Q8N556 730 aa26.35■■□□□ 1.81
CALCOCO1-220ENST00000552282 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
CALCOCO1-220ENST00000552282 KIDINS220Q9ULH0 1771 aa26.33■■□□□ 1.81
CALCOCO1-220ENST00000552282 FBXO41Q8TF61 875 aa26.31■■□□□ 1.8
CALCOCO1-220ENST00000552282 SAMD9LQ8IVG5 1584 aa26.3■■□□□ 1.8
CALCOCO1-220ENST00000552282 MLECQ14165 292 aa26.29■■□□□ 1.8
CALCOCO1-220ENST00000552282 GPATCH8Q9UKJ3 1502 aaKnown RBP26.29■■□□□ 1.8
CALCOCO1-220ENST00000552282 SETD1BQ9UPS6 1966 aaKnown RBP26.27■■□□□ 1.8
CALCOCO1-220ENST00000552282 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
CALCOCO1-220ENST00000552282 C3P01024 1663 aa26.23■■□□□ 1.79
CALCOCO1-220ENST00000552282 SYCP2Q9BX26 1530 aa26.23■■□□□ 1.79
CALCOCO1-220ENST00000552282 PLEKHH2Q8IVE3 1493 aa26.23■■□□□ 1.79
CALCOCO1-220ENST00000552282 HSPA2P54652 639 aa26.22■■□□□ 1.79
CALCOCO1-220ENST00000552282 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.79
CALCOCO1-220ENST00000552282 CNTLNQ9NXG0 1405 aa26.19■■□□□ 1.78
CALCOCO1-220ENST00000552282 PLXNC1O60486 1568 aa26.19■■□□□ 1.78
CALCOCO1-220ENST00000552282 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
CALCOCO1-220ENST00000552282 UHRF1BP1Q6BDS2 1440 aa26.17■■□□□ 1.78
CALCOCO1-220ENST00000552282 EHBP1L1Q8N3D4 1523 aa26.17■■□□□ 1.78
CALCOCO1-220ENST00000552282 ATP7AQ04656 1500 aa26.16■■□□□ 1.78
CALCOCO1-220ENST00000552282 STRCQ7RTU9 1775 aa26.15■■□□□ 1.78
CALCOCO1-220ENST00000552282 TIAM1Q13009 1591 aa26.14■■□□□ 1.78
CALCOCO1-220ENST00000552282 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
CALCOCO1-220ENST00000552282 MTUS2Q5JR59 1369 aa26.11■■□□□ 1.77
CALCOCO1-220ENST00000552282 CCNB3Q8WWL7 1395 aa26.11■■□□□ 1.77
CALCOCO1-220ENST00000552282 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
CALCOCO1-220ENST00000552282 MYT1LQ9UL68 1186 aa26.11■■□□□ 1.77
CALCOCO1-220ENST00000552282 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
CALCOCO1-220ENST00000552282 SPAG9O60271 1321 aaKnown RBP26.09■■□□□ 1.77
CALCOCO1-220ENST00000552282 NPATQ14207 1427 aa26.08■■□□□ 1.77
CALCOCO1-220ENST00000552282 CFDP1Q9UEE9 299 aaPredicted RBP26.07■■□□□ 1.76
CALCOCO1-220ENST00000552282 ADGBQ8N7X0 1667 aa26.06■■□□□ 1.76
CALCOCO1-220ENST00000552282 A2MP01023 1474 aa26.05■■□□□ 1.76
CALCOCO1-220ENST00000552282 MBD5Q9P267 1494 aa26.05■■□□□ 1.76
CALCOCO1-220ENST00000552282 SUPT6HQ7KZ85 1726 aaKnown RBP26.04■■□□□ 1.76
CALCOCO1-220ENST00000552282 PTPRTO14522 1441 aa26.04■■□□□ 1.76
CALCOCO1-220ENST00000552282 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
CALCOCO1-220ENST00000552282 DMRT2Q9Y5R5 561 aa26.03■■□□□ 1.76
CALCOCO1-220ENST00000552282 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
CALCOCO1-220ENST00000552282 RTEL1-TNFRSF6BF6WH68 1400 aa26.02■■□□□ 1.76
CALCOCO1-220ENST00000552282 CERKQ8TCT0 537 aa26■■□□□ 1.75
CALCOCO1-220ENST00000552282 ESF1Q9H501 851 aaKnown RBP26■■□□□ 1.75
CALCOCO1-220ENST00000552282 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
CALCOCO1-220ENST00000552282 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
CALCOCO1-220ENST00000552282 CLTCQ00610 1675 aaKnown RBP25.96■■□□□ 1.75
CALCOCO1-220ENST00000552282 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
CALCOCO1-220ENST00000552282 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.74
CALCOCO1-220ENST00000552282 PPP6R1Q9UPN7 881 aa25.95■■□□□ 1.74
CALCOCO1-220ENST00000552282 NCOA2Q15596 1464 aa25.93■■□□□ 1.74
CALCOCO1-220ENST00000552282 MYO3AQ8NEV4 1616 aa25.92■■□□□ 1.74
CALCOCO1-220ENST00000552282 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
CALCOCO1-220ENST00000552282 PTPRKQ15262 1439 aa25.9■■□□□ 1.74
CALCOCO1-220ENST00000552282 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
CALCOCO1-220ENST00000552282 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.74
CALCOCO1-220ENST00000552282 CAMSAP2Q08AD1 1489 aa25.89■■□□□ 1.73
CALCOCO1-220ENST00000552282 PLA2R1Q13018 1463 aa25.89■■□□□ 1.73
CALCOCO1-220ENST00000552282 LTBP4Q8N2S1 1624 aa25.88■■□□□ 1.73
CALCOCO1-220ENST00000552282 IQSEC2Q5JU85 1478 aa25.88■■□□□ 1.73
CALCOCO1-220ENST00000552282 CAMSAP1Q5T5Y3 1602 aa25.88■■□□□ 1.73
CALCOCO1-220ENST00000552282 DHX29Q7Z478 1369 aaKnown RBP25.87■■□□□ 1.73
CALCOCO1-220ENST00000552282 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
CALCOCO1-220ENST00000552282 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
CALCOCO1-220ENST00000552282 MAP3K1Q13233 1512 aa25.86■■□□□ 1.73
CALCOCO1-220ENST00000552282 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
CALCOCO1-220ENST00000552282 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
CALCOCO1-220ENST00000552282 LRRC9Q6ZRR7 1453 aa25.82■■□□□ 1.72
CALCOCO1-220ENST00000552282 KDM5DQ9BY66 1539 aa25.8■■□□□ 1.72
CALCOCO1-220ENST00000552282 MAST1Q9Y2H9 1570 aa25.79■■□□□ 1.72
CALCOCO1-220ENST00000552282 GGT6Q6P531 493 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms