RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
USP44-207ENST00000552237 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
USP44-207ENST00000552237 NLRP6P59044 892 aa12.55□□□□□ -0.4
USP44-207ENST00000552237 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
USP44-207ENST00000552237 RNF166Q96A37 237 aaPredicted RBP12.51□□□□□ -0.41
USP44-207ENST00000552237 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
USP44-207ENST00000552237 GPR153Q6NV75 609 aa12.49□□□□□ -0.41
USP44-207ENST00000552237 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
USP44-207ENST00000552237 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
USP44-207ENST00000552237 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
USP44-207ENST00000552237 STK25O00506 426 aa12.45□□□□□ -0.42
USP44-207ENST00000552237 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
USP44-207ENST00000552237 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
USP44-207ENST00000552237 PTGER2P43116 358 aa12.39□□□□□ -0.43
USP44-207ENST00000552237 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
USP44-207ENST00000552237 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP44-207ENST00000552237 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
USP44-207ENST00000552237 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
USP44-207ENST00000552237 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
USP44-207ENST00000552237 NUDT7P0C024 238 aa12.32□□□□□ -0.44
USP44-207ENST00000552237 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
USP44-207ENST00000552237 KIF3CO14782 793 aa12.3□□□□□ -0.44
USP44-207ENST00000552237 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP44-207ENST00000552237 PBX2P40425 430 aa12.26□□□□□ -0.45
USP44-207ENST00000552237 RGL2O15211 777 aa12.25□□□□□ -0.45
USP44-207ENST00000552237 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
USP44-207ENST00000552237 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
USP44-207ENST00000552237 SLC34A2O95436 690 aa12.22□□□□□ -0.45
USP44-207ENST00000552237 PKD2Q13563 968 aa12.2□□□□□ -0.46
USP44-207ENST00000552237 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
USP44-207ENST00000552237 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
USP44-207ENST00000552237 PPP1R37O75864 691 aa12.14□□□□□ -0.47
USP44-207ENST00000552237 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
USP44-207ENST00000552237 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
USP44-207ENST00000552237 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
USP44-207ENST00000552237 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
USP44-207ENST00000552237 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
USP44-207ENST00000552237 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
USP44-207ENST00000552237 TBC1D12O60347 775 aa12.05□□□□□ -0.48
USP44-207ENST00000552237 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
USP44-207ENST00000552237 FOXK1P85037 733 aa12.04□□□□□ -0.48
USP44-207ENST00000552237 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
USP44-207ENST00000552237 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
USP44-207ENST00000552237 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
USP44-207ENST00000552237 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
USP44-207ENST00000552237 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
USP44-207ENST00000552237 PSEN2P49810 448 aa12.01□□□□□ -0.49
USP44-207ENST00000552237 TK2O00142 265 aa11.99□□□□□ -0.49
USP44-207ENST00000552237 DSG2Q14126 1118 aa11.99□□□□□ -0.49
USP44-207ENST00000552237 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
USP44-207ENST00000552237 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
USP44-207ENST00000552237 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
USP44-207ENST00000552237 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
USP44-207ENST00000552237 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
USP44-207ENST00000552237 HRO43593 1189 aa11.92□□□□□ -0.5
USP44-207ENST00000552237 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP44-207ENST00000552237 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
USP44-207ENST00000552237 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
USP44-207ENST00000552237 OXER1Q8TDS5 423 aa11.85□□□□□ -0.51
USP44-207ENST00000552237 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
USP44-207ENST00000552237 VPS9D1Q9Y2B5 631 aa11.83□□□□□ -0.52
USP44-207ENST00000552237 PTPN5P54829 565 aa11.82□□□□□ -0.52
USP44-207ENST00000552237 PTPREP23469 700 aa11.8□□□□□ -0.52
USP44-207ENST00000552237 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
USP44-207ENST00000552237 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
USP44-207ENST00000552237 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
USP44-207ENST00000552237 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
USP44-207ENST00000552237 PDE4AP27815 886 aa11.78□□□□□ -0.52
USP44-207ENST00000552237 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
USP44-207ENST00000552237 FOSBP53539 338 aa11.76□□□□□ -0.53
USP44-207ENST00000552237 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
USP44-207ENST00000552237 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
USP44-207ENST00000552237 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
USP44-207ENST00000552237 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
USP44-207ENST00000552237 EVI5O60447 810 aa11.72□□□□□ -0.53
USP44-207ENST00000552237 WNT2BQ93097 391 aa11.72□□□□□ -0.53
USP44-207ENST00000552237 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
USP44-207ENST00000552237 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
USP44-207ENST00000552237 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
USP44-207ENST00000552237 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
USP44-207ENST00000552237 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
USP44-207ENST00000552237 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
USP44-207ENST00000552237 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
USP44-207ENST00000552237 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
USP44-207ENST00000552237 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
USP44-207ENST00000552237 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
USP44-207ENST00000552237 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
USP44-207ENST00000552237 RGS20O76081 388 aa11.62□□□□□ -0.55
USP44-207ENST00000552237 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
USP44-207ENST00000552237 IFFO2Q5TF58 517 aa11.61□□□□□ -0.55
USP44-207ENST00000552237 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
USP44-207ENST00000552237 A0A0G2JS52 829 aa11.58□□□□□ -0.56
USP44-207ENST00000552237 MFSD10Q14728 455 aa11.58□□□□□ -0.56
USP44-207ENST00000552237 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
USP44-207ENST00000552237 IRX2Q9BZI1 471 aaPredicted RBP11.57□□□□□ -0.56
USP44-207ENST00000552237 RABGEF1Q9UJ41 708 aa11.56□□□□□ -0.56
USP44-207ENST00000552237 PCDHGA10Q9Y5H3 936 aa11.56□□□□□ -0.56
USP44-207ENST00000552237 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
USP44-207ENST00000552237 FBXW7Q969H0 707 aa11.55□□□□□ -0.56
USP44-207ENST00000552237 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms