RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 PREX2Q70Z35 1606 aa29.18■■■□□ 2.26
DDX54-209ENST00000551912 NCOA2Q15596 1464 aa29.17■■■□□ 2.26
DDX54-209ENST00000551912 COL17A1Q9UMD9 1497 aaPredicted RBP29.17■■■□□ 2.26
DDX54-209ENST00000551912 AKNAQ7Z591 1439 aa29.17■■■□□ 2.26
DDX54-209ENST00000551912 CDC42BPAQ5VT25 1732 aa29.17■■■□□ 2.26
DDX54-209ENST00000551912 GPATCH8Q9UKJ3 1502 aaKnown RBP29.16■■■□□ 2.26
DDX54-209ENST00000551912 CDC42BPBQ9Y5S2 1711 aa29.15■■■□□ 2.26
DDX54-209ENST00000551912 CFDP1Q9UEE9 299 aaPredicted RBP29.09■■■□□ 2.25
DDX54-209ENST00000551912 ADGRL1O94910 1474 aa29.09■■■□□ 2.25
DDX54-209ENST00000551912 ITSN2Q9NZM3 1697 aa29.08■■■□□ 2.25
DDX54-209ENST00000551912 DENND4BO75064 1496 aaPredicted RBP29.05■■■□□ 2.24
DDX54-209ENST00000551912 SCAPERQ9BY12 1400 aa29.04■■■□□ 2.24
DDX54-209ENST00000551912 RAPGEF3O95398 923 aa29.04■■■□□ 2.24
DDX54-209ENST00000551912 ZNF777Q9ULD5 760 aaPredicted RBP29.04■■■□□ 2.24
DDX54-209ENST00000551912 SAMD9LQ8IVG5 1584 aa28.99■■■□□ 2.23
DDX54-209ENST00000551912 ABCC1P33527 1531 aa28.99■■■□□ 2.23
DDX54-209ENST00000551912 MYOM3Q5VTT5 1437 aa28.97■■■□□ 2.23
DDX54-209ENST00000551912 POGZQ7Z3K3 1410 aa28.97■■■□□ 2.23
DDX54-209ENST00000551912 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
DDX54-209ENST00000551912 FRMPD1Q5SYB0 1578 aa28.96■■■□□ 2.23
DDX54-209ENST00000551912 PLEKHH2Q8IVE3 1493 aa28.96■■■□□ 2.23
DDX54-209ENST00000551912 ARHGEF12Q9NZN5 1544 aa28.93■■■□□ 2.22
DDX54-209ENST00000551912 KIAA1107Q9UPP5 1409 aa28.93■■■□□ 2.22
DDX54-209ENST00000551912 ZNF644Q9H582 1327 aaPredicted RBP28.93■■■□□ 2.22
DDX54-209ENST00000551912 ZNF518AQ6AHZ1 1483 aa28.92■■■□□ 2.22
DDX54-209ENST00000551912 MIA2Q96PC5 1412 aa28.92■■■□□ 2.22
DDX54-209ENST00000551912 SYCP2Q9BX26 1530 aa28.91■■■□□ 2.22
DDX54-209ENST00000551912 PPARGC1BQ86YN6 1023 aaKnown RBP28.91■■■□□ 2.22
DDX54-209ENST00000551912 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
DDX54-209ENST00000551912 TRAPPC8Q9Y2L5 1435 aa28.88■■■□□ 2.21
DDX54-209ENST00000551912 AFAP1Q8N556 730 aa28.88■■■□□ 2.21
DDX54-209ENST00000551912 CAMSAP2Q08AD1 1489 aa28.88■■■□□ 2.21
DDX54-209ENST00000551912 ZMYM4Q5VZL5 1548 aa28.88■■■□□ 2.21
DDX54-209ENST00000551912 KDM5CP41229 1560 aa28.85■■■□□ 2.21
DDX54-209ENST00000551912 FGD6Q6ZV73 1430 aa28.83■■■□□ 2.21
DDX54-209ENST00000551912 MAGI2Q86UL8 1455 aa28.83■■■□□ 2.21
DDX54-209ENST00000551912 MBD5Q9P267 1494 aa28.82■■■□□ 2.2
DDX54-209ENST00000551912 PTPN23Q9H3S7 1636 aa28.79■■■□□ 2.2
DDX54-209ENST00000551912 ZFYVE16Q7Z3T8 1539 aa28.79■■■□□ 2.2
DDX54-209ENST00000551912 RSPH4AQ5TD94 716 aa28.78■■■□□ 2.2
DDX54-209ENST00000551912 MYT1LQ9UL68 1186 aa28.78■■■□□ 2.2
DDX54-209ENST00000551912 HECW2Q9P2P5 1572 aa28.77■■■□□ 2.2
DDX54-209ENST00000551912 ARHGEF40Q8TER5 1519 aa28.77■■■□□ 2.2
DDX54-209ENST00000551912 MLH3Q9UHC1 1453 aa28.77■■■□□ 2.2
DDX54-209ENST00000551912 YEATS2Q9ULM3 1422 aa28.76■■■□□ 2.19
DDX54-209ENST00000551912 SPAG9O60271 1321 aaKnown RBP28.75■■■□□ 2.19
DDX54-209ENST00000551912 CCDC141Q6ZP82 1450 aa28.75■■■□□ 2.19
DDX54-209ENST00000551912 TCOF1Q13428 1488 aaKnown RBP28.74■■■□□ 2.19
DDX54-209ENST00000551912 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
DDX54-209ENST00000551912 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
DDX54-209ENST00000551912 ATP10AO60312 1499 aa28.67■■■□□ 2.18
DDX54-209ENST00000551912 TSPY4P0CV99 314 aa28.67■■■□□ 2.18
DDX54-209ENST00000551912 TSPY10P0CW01 314 aa28.67■■■□□ 2.18
DDX54-209ENST00000551912 FAM50AQ14320 339 aaKnown RBP28.67■■■□□ 2.18
DDX54-209ENST00000551912 ATP7AQ04656 1500 aa28.67■■■□□ 2.18
DDX54-209ENST00000551912 INO80Q9ULG1 1556 aaPredicted RBP28.67■■■□□ 2.18
DDX54-209ENST00000551912 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
DDX54-209ENST00000551912 DIP2CQ9Y2E4 1556 aa28.65■■■□□ 2.18
DDX54-209ENST00000551912 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
DDX54-209ENST00000551912 C9orf84Q5VXU9 1444 aa28.63■■■□□ 2.17
DDX54-209ENST00000551912 ABCC5O15440 1437 aa28.6■■■□□ 2.17
DDX54-209ENST00000551912 DNMT1P26358 1616 aaKnown RBP28.6■■■□□ 2.17
DDX54-209ENST00000551912 ARID4BQ4LE39 1312 aaPredicted RBP28.6■■■□□ 2.17
DDX54-209ENST00000551912 DAPK1P53355 1430 aa28.6■■■□□ 2.17
DDX54-209ENST00000551912 MAST1Q9Y2H9 1570 aa28.58■■■□□ 2.17
DDX54-209ENST00000551912 REREQ9P2R6 1566 aa28.57■■■□□ 2.16
DDX54-209ENST00000551912 RRBP1Q9P2E9 1410 aaKnown RBP28.56■■■□□ 2.16
DDX54-209ENST00000551912 SHANK2Q9UPX8 1470 aa28.56■■■□□ 2.16
DDX54-209ENST00000551912 CROCC2H7BZ55 1655 aa28.55■■■□□ 2.16
DDX54-209ENST00000551912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.55■■■□□ 2.16
DDX54-209ENST00000551912 SIGLEC1Q9BZZ2 1709 aa28.52■■■□□ 2.16
DDX54-209ENST00000551912 A2MP01023 1474 aa28.52■■■□□ 2.16
DDX54-209ENST00000551912 ADGBQ8N7X0 1667 aa28.51■■■□□ 2.16
DDX54-209ENST00000551912 AGLP35573 1532 aa28.48■■■□□ 2.15
DDX54-209ENST00000551912 PLXNC1O60486 1568 aa28.47■■■□□ 2.15
DDX54-209ENST00000551912 KDM4FA0A1W2PPD8 638 aa28.47■■■□□ 2.15
DDX54-209ENST00000551912 CHIC2Q9UKJ5 165 aa28.47■■■□□ 2.15
DDX54-209ENST00000551912 DHX29Q7Z478 1369 aaKnown RBP28.46■■■□□ 2.15
DDX54-209ENST00000551912 BCORL1Q5H9F3 1711 aa28.46■■■□□ 2.15
DDX54-209ENST00000551912 ANKRD30AQ9BXX3 1397 aa28.43■■■□□ 2.14
DDX54-209ENST00000551912 MLECQ14165 292 aa28.43■■■□□ 2.14
DDX54-209ENST00000551912 ITGAEP38570 1179 aa28.42■■■□□ 2.14
DDX54-209ENST00000551912 KIF15Q9NS87 1388 aa28.41■■■□□ 2.14
DDX54-209ENST00000551912 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
DDX54-209ENST00000551912 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
DDX54-209ENST00000551912 ADGRL2O95490 1459 aa28.4■■■□□ 2.14
DDX54-209ENST00000551912 NCOA1Q15788 1441 aa28.4■■■□□ 2.14
DDX54-209ENST00000551912 ADAMTSL3P82987 1691 aa28.39■■■□□ 2.14
DDX54-209ENST00000551912 DUOX2Q9NRD8 1548 aa28.38■■■□□ 2.13
DDX54-209ENST00000551912 KIF3BO15066 747 aa28.34■■■□□ 2.13
DDX54-209ENST00000551912 ROCK1Q13464 1354 aa28.34■■■□□ 2.13
DDX54-209ENST00000551912 MADDQ8WXG6 1647 aa28.32■■■□□ 2.12
DDX54-209ENST00000551912 ERBINQ96RT1 1412 aa28.3■■■□□ 2.12
DDX54-209ENST00000551912 GGT6Q6P531 493 aa28.3■■■□□ 2.12
DDX54-209ENST00000551912 EIF2AK4Q9P2K8 1649 aaKnown RBP28.29■■■□□ 2.12
DDX54-209ENST00000551912 FER1L4A9Z1Z3 1794 aa28.28■■■□□ 2.12
DDX54-209ENST00000551912 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
DDX54-209ENST00000551912 PPP6R1Q9UPN7 881 aa28.25■■■□□ 2.11
DDX54-209ENST00000551912 RIMS1Q86UR5 1692 aaKnown RBP28.25■■■□□ 2.11
DDX54-209ENST00000551912 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms