RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-209ENST00000551424 KIF14Q15058 1648 aa37.61■■■■□ 3.61
CNTN1-209ENST00000551424 POGZQ7Z3K3 1410 aa37.59■■■■□ 3.61
CNTN1-209ENST00000551424 SIGLEC1Q9BZZ2 1709 aa37.58■■■■□ 3.61
CNTN1-209ENST00000551424 MAGI2Q86UL8 1455 aa37.56■■■■□ 3.6
CNTN1-209ENST00000551424 LRRIQ1Q96JM4 1722 aa37.56■■■■□ 3.6
CNTN1-209ENST00000551424 TROQ12816 1431 aaPredicted RBP37.54■■■■□ 3.6
CNTN1-209ENST00000551424 EFCAB2Q5VUJ9 269 aa37.54■■■■□ 3.6
CNTN1-209ENST00000551424 PLPPR3Q6T4P5 718 aa37.54■■■■□ 3.6
CNTN1-209ENST00000551424 PCF11O94913 1555 aaKnown RBP37.51■■■■□ 3.6
CNTN1-209ENST00000551424 MLECQ14165 292 aa37.51■■■■□ 3.6
CNTN1-209ENST00000551424 CLIP1P30622 1438 aa37.51■■■■□ 3.59
CNTN1-209ENST00000551424 ARHGAP5Q13017 1502 aa37.48■■■■□ 3.59
CNTN1-209ENST00000551424 LMTK3Q96Q04 1460 aa37.45■■■■□ 3.59
CNTN1-209ENST00000551424 FER1L4A9Z1Z3 1794 aa37.42■■■■□ 3.58
CNTN1-209ENST00000551424 ATP10AO60312 1499 aa37.4■■■■□ 3.58
CNTN1-209ENST00000551424 C9orf84Q5VXU9 1444 aa37.37■■■■□ 3.57
CNTN1-209ENST00000551424 CASKIN1Q8WXD9 1431 aa37.37■■■■□ 3.57
CNTN1-209ENST00000551424 ZNF518AQ6AHZ1 1483 aa37.37■■■■□ 3.57
CNTN1-209ENST00000551424 CCDC18Q5T9S5 1454 aa37.35■■■■□ 3.57
CNTN1-209ENST00000551424 CDC42BPBQ9Y5S2 1711 aa37.34■■■■□ 3.57
CNTN1-209ENST00000551424 MYT1LQ9UL68 1186 aa37.34■■■■□ 3.57
CNTN1-209ENST00000551424 AFAP1Q8N556 730 aa37.33■■■■□ 3.57
CNTN1-209ENST00000551424 HSPA2P54652 639 aa37.31■■■■□ 3.56
CNTN1-209ENST00000551424 KDM5CP41229 1560 aa37.3■■■■□ 3.56
CNTN1-209ENST00000551424 PREX2Q70Z35 1606 aa37.29■■■■□ 3.56
CNTN1-209ENST00000551424 ARHGEF12Q9NZN5 1544 aa37.29■■■■□ 3.56
CNTN1-209ENST00000551424 FYCO1Q9BQS8 1478 aa37.24■■■■□ 3.55
CNTN1-209ENST00000551424 DIP2CQ9Y2E4 1556 aa37.22■■■■□ 3.55
CNTN1-209ENST00000551424 ABCC1P33527 1531 aa37.2■■■■□ 3.55
CNTN1-209ENST00000551424 FBXO41Q8TF61 875 aa37.19■■■■□ 3.54
CNTN1-209ENST00000551424 CDC42BPAQ5VT25 1732 aa37.19■■■■□ 3.54
CNTN1-209ENST00000551424 ITSN2Q9NZM3 1697 aa37.18■■■■□ 3.54
CNTN1-209ENST00000551424 ABCA6Q8N139 1617 aa37.18■■■■□ 3.54
CNTN1-209ENST00000551424 TRAPPC8Q9Y2L5 1435 aa37.18■■■■□ 3.54
CNTN1-209ENST00000551424 CEBPAP49715 358 aaPredicted RBP37.14■■■■□ 3.54
CNTN1-209ENST00000551424 MLH3Q9UHC1 1453 aa37.13■■■■□ 3.54
CNTN1-209ENST00000551424 REREQ9P2R6 1566 aa37.11■■■■□ 3.53
CNTN1-209ENST00000551424 PREX1Q8TCU6 1659 aa37.09■■■■□ 3.53
CNTN1-209ENST00000551424 ZNF777Q9ULD5 760 aaPredicted RBP37.08■■■■□ 3.53
CNTN1-209ENST00000551424 KIDINS220Q9ULH0 1771 aa37.04■■■■□ 3.52
CNTN1-209ENST00000551424 SAMD9LQ8IVG5 1584 aa37.02■■■■□ 3.52
CNTN1-209ENST00000551424 AGLP35573 1532 aa37■■■■□ 3.51
CNTN1-209ENST00000551424 GPATCH8Q9UKJ3 1502 aaKnown RBP37■■■■□ 3.51
CNTN1-209ENST00000551424 SYCP2Q9BX26 1530 aa36.99■■■■□ 3.51
CNTN1-209ENST00000551424 ESF1Q9H501 851 aaKnown RBP36.97■■■■□ 3.51
CNTN1-209ENST00000551424 C3P01024 1663 aa36.95■■■■□ 3.51
CNTN1-209ENST00000551424 UHRF1BP1Q6BDS2 1440 aa36.94■■■■□ 3.5
CNTN1-209ENST00000551424 HNRNPMP52272 730 aaKnown RBP eCLIP36.92■■■■□ 3.5
CNTN1-209ENST00000551424 MTUS2Q5JR59 1369 aa36.91■■■■□ 3.5
CNTN1-209ENST00000551424 CCNB3Q8WWL7 1395 aa36.91■■■■□ 3.5
CNTN1-209ENST00000551424 SPAG9O60271 1321 aaKnown RBP36.89■■■■□ 3.5
CNTN1-209ENST00000551424 CFDP1Q9UEE9 299 aaPredicted RBP36.89■■■■□ 3.5
CNTN1-209ENST00000551424 SETD1BQ9UPS6 1966 aaKnown RBP36.89■■■■□ 3.5
CNTN1-209ENST00000551424 PLEKHH2Q8IVE3 1493 aa36.83■■■■□ 3.49
CNTN1-209ENST00000551424 SUPT6HQ7KZ85 1726 aaKnown RBP36.83■■■■□ 3.49
CNTN1-209ENST00000551424 ATP7AQ04656 1500 aa36.83■■■■□ 3.49
CNTN1-209ENST00000551424 STRCQ7RTU9 1775 aa36.82■■■■□ 3.48
CNTN1-209ENST00000551424 CERKQ8TCT0 537 aa36.82■■■■□ 3.48
CNTN1-209ENST00000551424 CNTLNQ9NXG0 1405 aa36.8■■■■□ 3.48
CNTN1-209ENST00000551424 KIAA1107Q9UPP5 1409 aa36.8■■■■□ 3.48
CNTN1-209ENST00000551424 INO80Q9ULG1 1556 aaPredicted RBP36.78■■■■□ 3.48
CNTN1-209ENST00000551424 EHBP1L1Q8N3D4 1523 aa36.77■■■■□ 3.48
CNTN1-209ENST00000551424 CEP162Q5TB80 1403 aa36.76■■■■□ 3.48
CNTN1-209ENST00000551424 TIAM1Q13009 1591 aa36.76■■■■□ 3.48
CNTN1-209ENST00000551424 DMRT2Q9Y5R5 561 aa36.73■■■■□ 3.47
CNTN1-209ENST00000551424 A2MP01023 1474 aa36.72■■■■□ 3.47
CNTN1-209ENST00000551424 MROH2AA6NES4 1674 aa36.71■■■■□ 3.47
CNTN1-209ENST00000551424 ZNF644Q9H582 1327 aaPredicted RBP36.7■■■■□ 3.47
CNTN1-209ENST00000551424 PLXNC1O60486 1568 aa36.7■■■■□ 3.46
CNTN1-209ENST00000551424 CLTCQ00610 1675 aaKnown RBP36.67■■■■□ 3.46
CNTN1-209ENST00000551424 ZMYM3Q14202 1370 aa36.65■■■■□ 3.46
CNTN1-209ENST00000551424 ADGBQ8N7X0 1667 aa36.63■■■■□ 3.45
CNTN1-209ENST00000551424 GGT6Q6P531 493 aa36.62■■■■□ 3.45
CNTN1-209ENST00000551424 NPATQ14207 1427 aa36.61■■■■□ 3.45
CNTN1-209ENST00000551424 PTPRTO14522 1441 aa36.59■■■■□ 3.45
CNTN1-209ENST00000551424 MBD5Q9P267 1494 aa36.58■■■■□ 3.45
CNTN1-209ENST00000551424 NCOA1Q15788 1441 aa36.56■■■■□ 3.44
CNTN1-209ENST00000551424 NCOA2Q15596 1464 aa36.54■■■■□ 3.44
CNTN1-209ENST00000551424 CAMSAP1Q5T5Y3 1602 aa36.53■■■■□ 3.44
CNTN1-209ENST00000551424 MYO3AQ8NEV4 1616 aa36.5■■■■□ 3.43
CNTN1-209ENST00000551424 CAMSAP2Q08AD1 1489 aa36.49■■■■□ 3.43
CNTN1-209ENST00000551424 RTEL1-TNFRSF6BF6WH68 1400 aa36.48■■■■□ 3.43
CNTN1-209ENST00000551424 PTPRKQ15262 1439 aa36.48■■■■□ 3.43
CNTN1-209ENST00000551424 CCDC141Q6ZP82 1450 aa36.47■■■■□ 3.43
CNTN1-209ENST00000551424 ZNF142P52746 1687 aaPredicted RBP36.44■■■■□ 3.42
CNTN1-209ENST00000551424 DHX29Q7Z478 1369 aaKnown RBP36.42■■■■□ 3.42
CNTN1-209ENST00000551424 CEP170BQ9Y4F5 1589 aaPredicted RBP36.42■■■■□ 3.42
CNTN1-209ENST00000551424 NCKAP5LQ9HCH0 1330 aa36.41■■■■□ 3.42
CNTN1-209ENST00000551424 LOC105371045A0A1W2PR82 267 aa36.4■■■■□ 3.42
CNTN1-209ENST00000551424 PPP6R1Q9UPN7 881 aa36.4■■■■□ 3.42
CNTN1-209ENST00000551424 LTBP4Q8N2S1 1624 aa36.4■■■■□ 3.42
CNTN1-209ENST00000551424 VPS8Q8N3P4 1428 aa36.37■■■■□ 3.41
CNTN1-209ENST00000551424 KIF3BO15066 747 aa36.37■■■■□ 3.41
CNTN1-209ENST00000551424 LRRC9Q6ZRR7 1453 aa36.32■■■■□ 3.41
CNTN1-209ENST00000551424 RSPH4AQ5TD94 716 aa36.32■■■■□ 3.4
CNTN1-209ENST00000551424 PLA2R1Q13018 1463 aa36.31■■■■□ 3.4
CNTN1-209ENST00000551424 ARHGEF5Q12774 1597 aa36.31■■■■□ 3.4
CNTN1-209ENST00000551424 KDM5DQ9BY66 1539 aa36.28■■■■□ 3.4
CNTN1-209ENST00000551424 PKD2Q13563 968 aa36.27■■■■□ 3.4
CNTN1-209ENST00000551424 A2ML1A8K2U0 1454 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms