RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SCAF11-215ENST00000551391 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
SCAF11-215ENST00000551391 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-215ENST00000551391 PKD2Q13563 968 aa9.37□□□□□ -0.91
SCAF11-215ENST00000551391 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
SCAF11-215ENST00000551391 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
SCAF11-215ENST00000551391 STK25O00506 426 aa9.36□□□□□ -0.91
SCAF11-215ENST00000551391 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
SCAF11-215ENST00000551391 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
SCAF11-215ENST00000551391 VARS2Q5ST30 1063 aaKnown RBP9.32□□□□□ -0.92
SCAF11-215ENST00000551391 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
SCAF11-215ENST00000551391 GPR153Q6NV75 609 aa9.28□□□□□ -0.92
SCAF11-215ENST00000551391 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
SCAF11-215ENST00000551391 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
SCAF11-215ENST00000551391 RGL2O15211 777 aa9.25□□□□□ -0.93
SCAF11-215ENST00000551391 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
SCAF11-215ENST00000551391 C2orf72A6NCS6 295 aa9.21□□□□□ -0.94
SCAF11-215ENST00000551391 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
SCAF11-215ENST00000551391 ZNF316A6NFI3 1004 aaPredicted RBP9.19□□□□□ -0.94
SCAF11-215ENST00000551391 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCAF11-215ENST00000551391 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
SCAF11-215ENST00000551391 KIF3CO14782 793 aa9.18□□□□□ -0.94
SCAF11-215ENST00000551391 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
SCAF11-215ENST00000551391 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
SCAF11-215ENST00000551391 NUDT7P0C024 238 aa9.15□□□□□ -0.94
SCAF11-215ENST00000551391 PTGER2P43116 358 aa9.15□□□□□ -0.94
SCAF11-215ENST00000551391 PCDHGA4Q9Y5G9 962 aa9.13□□□□□ -0.95
SCAF11-215ENST00000551391 SLC34A2O95436 690 aa9.12□□□□□ -0.95
SCAF11-215ENST00000551391 PPP1R37O75864 691 aa9.11□□□□□ -0.95
SCAF11-215ENST00000551391 DCAF8L2P0C7V8 631 aa9.11□□□□□ -0.95
SCAF11-215ENST00000551391 PBX2P40425 430 aa9.09□□□□□ -0.95
SCAF11-215ENST00000551391 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCAF11-215ENST00000551391 LHX6Q9UPM6 363 aa9.09□□□□□ -0.95
SCAF11-215ENST00000551391 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
SCAF11-215ENST00000551391 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
SCAF11-215ENST00000551391 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
SCAF11-215ENST00000551391 TBC1D12O60347 775 aa9.03□□□□□ -0.96
SCAF11-215ENST00000551391 PLPP6Q8IY26 295 aa9.03□□□□□ -0.96
SCAF11-215ENST00000551391 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
SCAF11-215ENST00000551391 FOXK1P85037 733 aa9.02□□□□□ -0.97
SCAF11-215ENST00000551391 BBXQ8WY36 941 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-215ENST00000551391 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-215ENST00000551391 PTCD2Q8WV60 388 aaKnown RBP9.01□□□□□ -0.97
SCAF11-215ENST00000551391 RYDENQ9NUL5 291 aaKnown RBP9.01□□□□□ -0.97
SCAF11-215ENST00000551391 ARHGAP33O14559 1287 aa9□□□□□ -0.97
SCAF11-215ENST00000551391 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
SCAF11-215ENST00000551391 SLC24A1O60721 1099 aa8.97□□□□□ -0.97
SCAF11-215ENST00000551391 DSG2Q14126 1118 aa8.97□□□□□ -0.97
SCAF11-215ENST00000551391 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
SCAF11-215ENST00000551391 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
SCAF11-215ENST00000551391 PPP4R3BQ5MIZ7 849 aa8.96□□□□□ -0.98
SCAF11-215ENST00000551391 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-215ENST00000551391 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
SCAF11-215ENST00000551391 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
SCAF11-215ENST00000551391 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
SCAF11-215ENST00000551391 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
SCAF11-215ENST00000551391 TK2O00142 265 aa8.92□□□□□ -0.98
SCAF11-215ENST00000551391 HCSTQ9UBK5 93 aa8.92□□□□□ -0.98
SCAF11-215ENST00000551391 PSEN2P49810 448 aa8.91□□□□□ -0.98
SCAF11-215ENST00000551391 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
SCAF11-215ENST00000551391 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
SCAF11-215ENST00000551391 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
SCAF11-215ENST00000551391 PDE4AP27815 886 aa8.88□□□□□ -0.99
SCAF11-215ENST00000551391 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
SCAF11-215ENST00000551391 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
SCAF11-215ENST00000551391 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
SCAF11-215ENST00000551391 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
SCAF11-215ENST00000551391 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
SCAF11-215ENST00000551391 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
SCAF11-215ENST00000551391 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
SCAF11-215ENST00000551391 PAXIP1Q6ZW49 1069 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-215ENST00000551391 HRO43593 1189 aa8.84□□□□□ -0.99
SCAF11-215ENST00000551391 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
SCAF11-215ENST00000551391 CFAP44Q96MT7 982 aa8.82□□□□□ -1
SCAF11-215ENST00000551391 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
SCAF11-215ENST00000551391 PTPREP23469 700 aa8.8□□□□□ -1
SCAF11-215ENST00000551391 LARP6Q9BRS8 491 aaKnown RBP8.8□□□□□ -1
SCAF11-215ENST00000551391 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SCAF11-215ENST00000551391 MAP3K9P80192 1104 aa8.79□□□□□ -1
SCAF11-215ENST00000551391 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
SCAF11-215ENST00000551391 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
SCAF11-215ENST00000551391 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
SCAF11-215ENST00000551391 EVI5O60447 810 aa8.78□□□□□ -1
SCAF11-215ENST00000551391 FOSBP53539 338 aa8.78□□□□□ -1
SCAF11-215ENST00000551391 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
SCAF11-215ENST00000551391 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-215ENST00000551391 SLC4A5Q9BY07 1137 aa8.76□□□□□ -1.01
SCAF11-215ENST00000551391 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-215ENST00000551391 PTPN5P54829 565 aa8.75□□□□□ -1.01
SCAF11-215ENST00000551391 ZDHHC16Q969W1 377 aa8.75□□□□□ -1.01
SCAF11-215ENST00000551391 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
SCAF11-215ENST00000551391 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
SCAF11-215ENST00000551391 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
SCAF11-215ENST00000551391 MFSD10Q14728 455 aa8.71□□□□□ -1.02
SCAF11-215ENST00000551391 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.02
SCAF11-215ENST00000551391 ADAM33Q9BZ11 813 aa8.7□□□□□ -1.02
SCAF11-215ENST00000551391 NBPF3Q9H094 633 aa8.7□□□□□ -1.02
SCAF11-215ENST00000551391 TSHZ2Q9NRE2 1034 aa8.7□□□□□ -1.02
SCAF11-215ENST00000551391 BHMG1C9JSJ3 638 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-215ENST00000551391 WNT2BQ93097 391 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms