RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 PLCH2O75038 1416 aa11.89□□□□□ -0.51
SMARCD1-210ENST00000551352 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
SMARCD1-210ENST00000551352 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
SMARCD1-210ENST00000551352 CDC42BPAQ5VT25 1732 aa11.89□□□□□ -0.51
SMARCD1-210ENST00000551352 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
SMARCD1-210ENST00000551352 KDM5CP41229 1560 aa11.88□□□□□ -0.51
SMARCD1-210ENST00000551352 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
SMARCD1-210ENST00000551352 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
SMARCD1-210ENST00000551352 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
SMARCD1-210ENST00000551352 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
SMARCD1-210ENST00000551352 DIP2CQ9Y2E4 1556 aa11.86□□□□□ -0.51
SMARCD1-210ENST00000551352 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
SMARCD1-210ENST00000551352 TROQ12816 1431 aaPredicted RBP11.85□□□□□ -0.51
SMARCD1-210ENST00000551352 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
SMARCD1-210ENST00000551352 UBTFP17480 764 aaKnown RBP11.83□□□□□ -0.52
SMARCD1-210ENST00000551352 KIDINS220Q9ULH0 1771 aa11.82□□□□□ -0.52
SMARCD1-210ENST00000551352 ABCC1P33527 1531 aa11.82□□□□□ -0.52
SMARCD1-210ENST00000551352 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
SMARCD1-210ENST00000551352 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
SMARCD1-210ENST00000551352 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
SMARCD1-210ENST00000551352 STRCQ7RTU9 1775 aa11.81□□□□□ -0.52
SMARCD1-210ENST00000551352 C3P01024 1663 aa11.81□□□□□ -0.52
SMARCD1-210ENST00000551352 REREQ9P2R6 1566 aa11.8□□□□□ -0.52
SMARCD1-210ENST00000551352 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
SMARCD1-210ENST00000551352 ATP10AO60312 1499 aa11.8□□□□□ -0.52
SMARCD1-210ENST00000551352 CASKIN1Q8WXD9 1431 aa11.79□□□□□ -0.52
SMARCD1-210ENST00000551352 ZNF518AQ6AHZ1 1483 aa11.79□□□□□ -0.52
SMARCD1-210ENST00000551352 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
SMARCD1-210ENST00000551352 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
SMARCD1-210ENST00000551352 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.52
SMARCD1-210ENST00000551352 HSPA2P54652 639 aa11.77□□□□□ -0.53
SMARCD1-210ENST00000551352 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
SMARCD1-210ENST00000551352 MLECQ14165 292 aa11.76□□□□□ -0.53
SMARCD1-210ENST00000551352 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
SMARCD1-210ENST00000551352 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
SMARCD1-210ENST00000551352 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
SMARCD1-210ENST00000551352 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
SMARCD1-210ENST00000551352 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
SMARCD1-210ENST00000551352 CLIP1P30622 1438 aa11.74□□□□□ -0.53
SMARCD1-210ENST00000551352 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-210ENST00000551352 AGLP35573 1532 aa11.73□□□□□ -0.53
SMARCD1-210ENST00000551352 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
SMARCD1-210ENST00000551352 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-210ENST00000551352 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-210ENST00000551352 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-210ENST00000551352 FBXO41Q8TF61 875 aa11.71□□□□□ -0.53
SMARCD1-210ENST00000551352 MROH2AA6NES4 1674 aa11.71□□□□□ -0.54
SMARCD1-210ENST00000551352 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-210ENST00000551352 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-210ENST00000551352 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
SMARCD1-210ENST00000551352 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
SMARCD1-210ENST00000551352 TIAM1Q13009 1591 aa11.69□□□□□ -0.54
SMARCD1-210ENST00000551352 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-210ENST00000551352 ADGBQ8N7X0 1667 aa11.68□□□□□ -0.54
SMARCD1-210ENST00000551352 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
SMARCD1-210ENST00000551352 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.55
SMARCD1-210ENST00000551352 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
SMARCD1-210ENST00000551352 UHRF1BP1Q6BDS2 1440 aa11.62□□□□□ -0.55
SMARCD1-210ENST00000551352 EHBP1L1Q8N3D4 1523 aa11.62□□□□□ -0.55
SMARCD1-210ENST00000551352 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
SMARCD1-210ENST00000551352 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCD1-210ENST00000551352 MBD5Q9P267 1494 aa11.61□□□□□ -0.55
SMARCD1-210ENST00000551352 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
SMARCD1-210ENST00000551352 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
SMARCD1-210ENST00000551352 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-210ENST00000551352 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-210ENST00000551352 A2MP01023 1474 aa11.58□□□□□ -0.56
SMARCD1-210ENST00000551352 CAMSAP1Q5T5Y3 1602 aa11.58□□□□□ -0.56
SMARCD1-210ENST00000551352 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
SMARCD1-210ENST00000551352 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
SMARCD1-210ENST00000551352 PTPRTO14522 1441 aa11.57□□□□□ -0.56
SMARCD1-210ENST00000551352 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
SMARCD1-210ENST00000551352 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
SMARCD1-210ENST00000551352 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
SMARCD1-210ENST00000551352 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
SMARCD1-210ENST00000551352 CEP170BQ9Y4F5 1589 aaPredicted RBP11.56□□□□□ -0.56
SMARCD1-210ENST00000551352 MTUS2Q5JR59 1369 aa11.55□□□□□ -0.56
SMARCD1-210ENST00000551352 NPATQ14207 1427 aa11.55□□□□□ -0.56
SMARCD1-210ENST00000551352 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
SMARCD1-210ENST00000551352 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
SMARCD1-210ENST00000551352 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
SMARCD1-210ENST00000551352 POLR1AO95602 1720 aaPredicted RBP11.54□□□□□ -0.56
SMARCD1-210ENST00000551352 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
SMARCD1-210ENST00000551352 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-210ENST00000551352 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-210ENST00000551352 ARHGEF5Q12774 1597 aa11.52□□□□□ -0.57
SMARCD1-210ENST00000551352 NEURL4Q96JN8 1562 aa11.52□□□□□ -0.57
SMARCD1-210ENST00000551352 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-210ENST00000551352 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
SMARCD1-210ENST00000551352 VPS8Q8N3P4 1428 aa11.51□□□□□ -0.57
SMARCD1-210ENST00000551352 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
SMARCD1-210ENST00000551352 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
SMARCD1-210ENST00000551352 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
SMARCD1-210ENST00000551352 CEP152O94986 1710 aa11.49□□□□□ -0.57
SMARCD1-210ENST00000551352 PLA2R1Q13018 1463 aa11.49□□□□□ -0.57
SMARCD1-210ENST00000551352 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
SMARCD1-210ENST00000551352 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-210ENST00000551352 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
SMARCD1-210ENST00000551352 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
SMARCD1-210ENST00000551352 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms