RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
ERBB3-215ENST00000550828 ILDR1Q86SU0 546 aaPredicted RBP21.02■□□□□ 0.96
ERBB3-215ENST00000550828 PLCH2O75038 1416 aa21.02■□□□□ 0.96
ERBB3-215ENST00000550828 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
ERBB3-215ENST00000550828 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
ERBB3-215ENST00000550828 SAMD9LQ8IVG5 1584 aa20.99■□□□□ 0.95
ERBB3-215ENST00000550828 MYOM3Q5VTT5 1437 aa20.99■□□□□ 0.95
ERBB3-215ENST00000550828 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
ERBB3-215ENST00000550828 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
ERBB3-215ENST00000550828 FANCAO15360 1455 aa20.95■□□□□ 0.94
ERBB3-215ENST00000550828 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
ERBB3-215ENST00000550828 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
ERBB3-215ENST00000550828 ABCC1P33527 1531 aa20.93■□□□□ 0.94
ERBB3-215ENST00000550828 TEX14Q8IWB6 1497 aa20.92■□□□□ 0.94
ERBB3-215ENST00000550828 NEO1Q92859 1461 aa20.92■□□□□ 0.94
ERBB3-215ENST00000550828 ARHGEF12Q9NZN5 1544 aa20.9■□□□□ 0.94
ERBB3-215ENST00000550828 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
ERBB3-215ENST00000550828 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
ERBB3-215ENST00000550828 ZNF644Q9H582 1327 aaPredicted RBP20.89■□□□□ 0.93
ERBB3-215ENST00000550828 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
ERBB3-215ENST00000550828 TCOF1Q13428 1488 aaKnown RBP20.88■□□□□ 0.93
ERBB3-215ENST00000550828 AKNAQ7Z591 1439 aa20.88■□□□□ 0.93
ERBB3-215ENST00000550828 RICTORQ6R327 1708 aa20.88■□□□□ 0.93
ERBB3-215ENST00000550828 FRMPD1Q5SYB0 1578 aa20.88■□□□□ 0.93
ERBB3-215ENST00000550828 HECW2Q9P2P5 1572 aa20.88■□□□□ 0.93
ERBB3-215ENST00000550828 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
ERBB3-215ENST00000550828 COL17A1Q9UMD9 1497 aaPredicted RBP20.87■□□□□ 0.93
ERBB3-215ENST00000550828 EFCAB2Q5VUJ9 269 aa20.86■□□□□ 0.93
ERBB3-215ENST00000550828 RRBP1Q9P2E9 1410 aaKnown RBP20.86■□□□□ 0.93
ERBB3-215ENST00000550828 ZNF777Q9ULD5 760 aaPredicted RBP20.83■□□□□ 0.93
ERBB3-215ENST00000550828 MBD5Q9P267 1494 aa20.82■□□□□ 0.92
ERBB3-215ENST00000550828 CROCC2H7BZ55 1655 aa20.82■□□□□ 0.92
ERBB3-215ENST00000550828 ARHGEF5Q12774 1597 aa20.8■□□□□ 0.92
ERBB3-215ENST00000550828 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
ERBB3-215ENST00000550828 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
ERBB3-215ENST00000550828 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
ERBB3-215ENST00000550828 DNMT1P26358 1616 aaKnown RBP20.8■□□□□ 0.92
ERBB3-215ENST00000550828 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
ERBB3-215ENST00000550828 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
ERBB3-215ENST00000550828 KDM5CP41229 1560 aa20.77■□□□□ 0.92
ERBB3-215ENST00000550828 DENND4BO75064 1496 aaPredicted RBP20.76■□□□□ 0.91
ERBB3-215ENST00000550828 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
ERBB3-215ENST00000550828 CCDC141Q6ZP82 1450 aa20.74■□□□□ 0.91
ERBB3-215ENST00000550828 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
ERBB3-215ENST00000550828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.73■□□□□ 0.91
ERBB3-215ENST00000550828 INO80Q9ULG1 1556 aaPredicted RBP20.73■□□□□ 0.91
ERBB3-215ENST00000550828 ABCC5O15440 1437 aa20.73■□□□□ 0.91
ERBB3-215ENST00000550828 KIDINS220Q9ULH0 1771 aa20.73■□□□□ 0.91
ERBB3-215ENST00000550828 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
ERBB3-215ENST00000550828 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
ERBB3-215ENST00000550828 ZNF518AQ6AHZ1 1483 aa20.72■□□□□ 0.91
ERBB3-215ENST00000550828 DAPK1P53355 1430 aa20.71■□□□□ 0.91
ERBB3-215ENST00000550828 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
ERBB3-215ENST00000550828 MAST1Q9Y2H9 1570 aa20.71■□□□□ 0.91
ERBB3-215ENST00000550828 ZFYVE16Q7Z3T8 1539 aa20.7■□□□□ 0.9
ERBB3-215ENST00000550828 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
ERBB3-215ENST00000550828 ADGBQ8N7X0 1667 aa20.69■□□□□ 0.9
ERBB3-215ENST00000550828 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
ERBB3-215ENST00000550828 SHANK2Q9UPX8 1470 aa20.67■□□□□ 0.9
ERBB3-215ENST00000550828 ATP7AQ04656 1500 aa20.66■□□□□ 0.9
ERBB3-215ENST00000550828 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.9
ERBB3-215ENST00000550828 MLH3Q9UHC1 1453 aa20.64■□□□□ 0.89
ERBB3-215ENST00000550828 C9orf84Q5VXU9 1444 aa20.64■□□□□ 0.89
ERBB3-215ENST00000550828 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
ERBB3-215ENST00000550828 YEATS2Q9ULM3 1422 aa20.63■□□□□ 0.89
ERBB3-215ENST00000550828 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
ERBB3-215ENST00000550828 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
ERBB3-215ENST00000550828 ADGRL2O95490 1459 aa20.61■□□□□ 0.89
ERBB3-215ENST00000550828 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
ERBB3-215ENST00000550828 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
ERBB3-215ENST00000550828 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
ERBB3-215ENST00000550828 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
ERBB3-215ENST00000550828 ITGAEP38570 1179 aa20.58■□□□□ 0.89
ERBB3-215ENST00000550828 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
ERBB3-215ENST00000550828 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
ERBB3-215ENST00000550828 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
ERBB3-215ENST00000550828 FBXO41Q8TF61 875 aa20.54■□□□□ 0.88
ERBB3-215ENST00000550828 REREQ9P2R6 1566 aa20.52■□□□□ 0.88
ERBB3-215ENST00000550828 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
ERBB3-215ENST00000550828 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
ERBB3-215ENST00000550828 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
ERBB3-215ENST00000550828 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
ERBB3-215ENST00000550828 ATP10AO60312 1499 aa20.5■□□□□ 0.87
ERBB3-215ENST00000550828 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
ERBB3-215ENST00000550828 ADAMTSL3P82987 1691 aa20.48■□□□□ 0.87
ERBB3-215ENST00000550828 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
ERBB3-215ENST00000550828 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
ERBB3-215ENST00000550828 A2MP01023 1474 aa20.48■□□□□ 0.87
ERBB3-215ENST00000550828 BCORL1Q5H9F3 1711 aa20.47■□□□□ 0.87
ERBB3-215ENST00000550828 RRP7BPQ9NSQ0 103 aa20.47■□□□□ 0.87
ERBB3-215ENST00000550828 NAIPQ13075 1403 aa20.46■□□□□ 0.87
ERBB3-215ENST00000550828 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
ERBB3-215ENST00000550828 EIF2AK4Q9P2K8 1649 aaKnown RBP20.45■□□□□ 0.86
ERBB3-215ENST00000550828 HFM1A2PYH4 1435 aa20.44■□□□□ 0.86
ERBB3-215ENST00000550828 PTPRMP28827 1452 aa20.44■□□□□ 0.86
ERBB3-215ENST00000550828 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
ERBB3-215ENST00000550828 AGLP35573 1532 aa20.43■□□□□ 0.86
ERBB3-215ENST00000550828 MROH1Q8NDA8 1641 aa20.42■□□□□ 0.86
ERBB3-215ENST00000550828 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
ERBB3-215ENST00000550828 DEPDC5O75140 1603 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms