RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
PPFIA2-220ENST00000550584 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
PPFIA2-220ENST00000550584 TPM4P67936 248 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 KIF16BQ96L93 1317 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 HOMEZQ8IX15 550 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
PPFIA2-220ENST00000550584 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
PPFIA2-220ENST00000550584 ARID3AQ99856 593 aa10.98□□□□□ -0.65
PPFIA2-220ENST00000550584 CAVIN1Q6NZI2 390 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 ACBD3Q9H3P7 528 aa10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 GOLGA6L4A6NEF3 574 aa10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 DNAJC2Q99543 621 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 CALCOCO1Q9P1Z2 691 aa10.97□□□□□ -0.65
PPFIA2-220ENST00000550584 LETM1O95202 739 aaPredicted RBP10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 IRX3P78415 501 aaPredicted RBP10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 SLKQ9H2G2 1235 aaPredicted RBP10.95□□□□□ -0.66
PPFIA2-220ENST00000550584 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-220ENST00000550584 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
PPFIA2-220ENST00000550584 RDXP35241 583 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-220ENST00000550584 R3HCC1Q9Y3T6 440 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-220ENST00000550584 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
PPFIA2-220ENST00000550584 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
PPFIA2-220ENST00000550584 AAMPQ13685 434 aa10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 DHX8Q14562 1220 aaKnown RBP10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 RALBP1Q15311 655 aa10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 RNF20Q5VTR2 975 aa10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 AK7Q96M32 723 aa10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 RBM10P98175 930 aaKnown RBP10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 CTR9Q6PD62 1173 aa10.91□□□□□ -0.66
PPFIA2-220ENST00000550584 HSP90B1P14625 803 aaKnown RBP10.9□□□□□ -0.66
PPFIA2-220ENST00000550584 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
PPFIA2-220ENST00000550584 ESPNB1AK53 854 aa10.9□□□□□ -0.67
PPFIA2-220ENST00000550584 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-220ENST00000550584 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
PPFIA2-220ENST00000550584 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
PPFIA2-220ENST00000550584 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-220ENST00000550584 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-220ENST00000550584 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 CLGNO14967 610 aa10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 EIF3AQ14152 1382 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 MCM5P33992 734 aa10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
PPFIA2-220ENST00000550584 LEKR1Q6ZMV7 388 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 DYNC1I1O14576 645 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 CFAP53Q96M91 514 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 UQCRHLA0A096LP55 91 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 UQCRHP07919 91 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 CLCN1P35523 988 aa10.87□□□□□ -0.67
PPFIA2-220ENST00000550584 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 RBM28Q9NW13 759 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 PATL2C9JE40 543 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 ATP6V1DQ9Y5K8 247 aa10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 CCDC70Q6NSX1 233 aa10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
PPFIA2-220ENST00000550584 NUCB2P80303 420 aa10.85□□□□□ -0.67
PPFIA2-220ENST00000550584 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
PPFIA2-220ENST00000550584 PES1O00541 588 aaKnown RBP10.85□□□□□ -0.67
PPFIA2-220ENST00000550584 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
PPFIA2-220ENST00000550584 CCP110O43303 1012 aa10.84□□□□□ -0.67
PPFIA2-220ENST00000550584 ST18O60284 1047 aa10.84□□□□□ -0.67
PPFIA2-220ENST00000550584 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
PPFIA2-220ENST00000550584 KIF20AO95235 890 aa10.83□□□□□ -0.67
PPFIA2-220ENST00000550584 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.67
PPFIA2-220ENST00000550584 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
PPFIA2-220ENST00000550584 MSH5O43196 834 aa10.83□□□□□ -0.68
PPFIA2-220ENST00000550584 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
PPFIA2-220ENST00000550584 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
PPFIA2-220ENST00000550584 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
PPFIA2-220ENST00000550584 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
PPFIA2-220ENST00000550584 TRAK2O60296 914 aa10.82□□□□□ -0.68
PPFIA2-220ENST00000550584 TERF1P54274 439 aa10.81□□□□□ -0.68
PPFIA2-220ENST00000550584 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
PPFIA2-220ENST00000550584 NEFHP12036 1026 aa10.81□□□□□ -0.68
PPFIA2-220ENST00000550584 CDR1P51861 262 aa10.81□□□□□ -0.68
PPFIA2-220ENST00000550584 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
PPFIA2-220ENST00000550584 NBPF1Q3BBV0 1214 aa10.8□□□□□ -0.68
PPFIA2-220ENST00000550584 NAP1L2Q9ULW6 460 aaPredicted RBP10.8□□□□□ -0.68
PPFIA2-220ENST00000550584 IPO8O15397 1037 aaKnown RBP10.8□□□□□ -0.68
PPFIA2-220ENST00000550584 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
PPFIA2-220ENST00000550584 KNSTRNQ9Y448 316 aa10.8□□□□□ -0.68
PPFIA2-220ENST00000550584 MBD3O95983 291 aa10.79□□□□□ -0.68
PPFIA2-220ENST00000550584 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
PPFIA2-220ENST00000550584 GIMAP7Q8NHV1 300 aa10.79□□□□□ -0.68
PPFIA2-220ENST00000550584 NGEFQ8N5V2 710 aa10.79□□□□□ -0.68
PPFIA2-220ENST00000550584 CCDC34Q96HJ3 373 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms