RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
CHPT1-206ENST00000550385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.176e-6■□□□□ 11
CHPT1-206ENST00000550385 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
CHPT1-206ENST00000550385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHPT1-206ENST00000550385 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
CHPT1-206ENST00000550385 FAM50AQ14320 339 aaKnown RBP16.1■□□□□ 0.17
CHPT1-206ENST00000550385 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
CHPT1-206ENST00000550385 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
CHPT1-206ENST00000550385 PLCH2O75038 1416 aa16.09■□□□□ 0.17
CHPT1-206ENST00000550385 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
CHPT1-206ENST00000550385 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
CHPT1-206ENST00000550385 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.16
CHPT1-206ENST00000550385 ABCA9Q8IUA7 1624 aa16.06■□□□□ 0.16
CHPT1-206ENST00000550385 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
CHPT1-206ENST00000550385 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
CHPT1-206ENST00000550385 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
CHPT1-206ENST00000550385 TCOF1Q13428 1488 aaKnown RBP16.04■□□□□ 0.16
CHPT1-206ENST00000550385 CD109Q6YHK3 1445 aa16.04■□□□□ 0.16
CHPT1-206ENST00000550385 GLI2P10070 1586 aa16.04■□□□□ 0.16
CHPT1-206ENST00000550385 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
CHPT1-206ENST00000550385 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
CHPT1-206ENST00000550385 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
CHPT1-206ENST00000550385 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
CHPT1-206ENST00000550385 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.16
CHPT1-206ENST00000550385 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.15
CHPT1-206ENST00000550385 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
CHPT1-206ENST00000550385 KCNA4P22459 653 aa16.01■□□□□ 0.15
CHPT1-206ENST00000550385 PLEKHH2Q8IVE3 1493 aa16.01■□□□□ 0.15
CHPT1-206ENST00000550385 ZNF644Q9H582 1327 aaPredicted RBP15.99■□□□□ 0.15
CHPT1-206ENST00000550385 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
CHPT1-206ENST00000550385 ITGAEP38570 1179 aa15.98■□□□□ 0.15
CHPT1-206ENST00000550385 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
CHPT1-206ENST00000550385 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
CHPT1-206ENST00000550385 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
CHPT1-206ENST00000550385 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
CHPT1-206ENST00000550385 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
CHPT1-206ENST00000550385 FANCAO15360 1455 aa15.97■□□□□ 0.15
CHPT1-206ENST00000550385 NPM3O75607 178 aaKnown RBP15.95■□□□□ 0.14
CHPT1-206ENST00000550385 HNRNPMP52272 730 aaKnown RBP eCLIP15.95■□□□□ 0.149e-7■■■■■ 28.4
CHPT1-206ENST00000550385 MAP3K4Q9Y6R4 1608 aa15.94■□□□□ 0.14
CHPT1-206ENST00000550385 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
CHPT1-206ENST00000550385 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
CHPT1-206ENST00000550385 NEO1Q92859 1461 aa15.93■□□□□ 0.14
CHPT1-206ENST00000550385 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
CHPT1-206ENST00000550385 TEX14Q8IWB6 1497 aa15.92■□□□□ 0.14
CHPT1-206ENST00000550385 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
CHPT1-206ENST00000550385 ABCC5O15440 1437 aa15.92■□□□□ 0.14
CHPT1-206ENST00000550385 DAPK1P53355 1430 aa15.92■□□□□ 0.14
CHPT1-206ENST00000550385 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
CHPT1-206ENST00000550385 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
CHPT1-206ENST00000550385 SCAPERQ9BY12 1400 aa15.89■□□□□ 0.13
CHPT1-206ENST00000550385 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
CHPT1-206ENST00000550385 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
CHPT1-206ENST00000550385 CCDC141Q6ZP82 1450 aa15.89■□□□□ 0.13
CHPT1-206ENST00000550385 CHIC2Q9UKJ5 165 aa15.88■□□□□ 0.13
CHPT1-206ENST00000550385 ABCC1P33527 1531 aa15.88■□□□□ 0.13
CHPT1-206ENST00000550385 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
CHPT1-206ENST00000550385 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
CHPT1-206ENST00000550385 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
CHPT1-206ENST00000550385 PTPRKQ15262 1439 aa15.86■□□□□ 0.13
CHPT1-206ENST00000550385 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
CHPT1-206ENST00000550385 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
CHPT1-206ENST00000550385 SHANK2Q9UPX8 1470 aa15.85■□□□□ 0.13
CHPT1-206ENST00000550385 HRCP23327 699 aa15.85■□□□□ 0.13
CHPT1-206ENST00000550385 ARHGEF12Q9NZN5 1544 aa15.84■□□□□ 0.13
CHPT1-206ENST00000550385 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
CHPT1-206ENST00000550385 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
CHPT1-206ENST00000550385 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
CHPT1-206ENST00000550385 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.12
CHPT1-206ENST00000550385 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.12
CHPT1-206ENST00000550385 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
CHPT1-206ENST00000550385 RRP7BPQ9NSQ0 103 aa15.82■□□□□ 0.12
CHPT1-206ENST00000550385 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
CHPT1-206ENST00000550385 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
CHPT1-206ENST00000550385 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
CHPT1-206ENST00000550385 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
CHPT1-206ENST00000550385 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
CHPT1-206ENST00000550385 ADGRL2O95490 1459 aa15.81■□□□□ 0.12
CHPT1-206ENST00000550385 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
CHPT1-206ENST00000550385 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
CHPT1-206ENST00000550385 POGZQ7Z3K3 1410 aa15.79■□□□□ 0.12
CHPT1-206ENST00000550385 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
CHPT1-206ENST00000550385 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
CHPT1-206ENST00000550385 NAIPQ13075 1403 aa15.77■□□□□ 0.12
CHPT1-206ENST00000550385 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
CHPT1-206ENST00000550385 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
CHPT1-206ENST00000550385 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
CHPT1-206ENST00000550385 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
CHPT1-206ENST00000550385 MLH3Q9UHC1 1453 aa15.75■□□□□ 0.11
CHPT1-206ENST00000550385 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
CHPT1-206ENST00000550385 KDM5CP41229 1560 aa15.73■□□□□ 0.11
CHPT1-206ENST00000550385 ANKRD50Q9ULJ7 1429 aa15.72■□□□□ 0.11
CHPT1-206ENST00000550385 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
CHPT1-206ENST00000550385 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
CHPT1-206ENST00000550385 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
CHPT1-206ENST00000550385 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
CHPT1-206ENST00000550385 RICTORQ6R327 1708 aa15.7■□□□□ 0.1
CHPT1-206ENST00000550385 GCC2Q8IWJ2 1684 aa15.7■□□□□ 0.1
CHPT1-206ENST00000550385 ZFYVE16Q7Z3T8 1539 aa15.69■□□□□ 0.1
CHPT1-206ENST00000550385 DHX29Q7Z478 1369 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms