RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
SLC38A1-208ENST00000550173 YEATS2Q9ULM3 1422 aa32.41■■■□□ 2.78
SLC38A1-208ENST00000550173 MAGI2Q86UL8 1455 aa32.41■■■□□ 2.78
SLC38A1-208ENST00000550173 MADDQ8WXG6 1647 aa32.4■■■□□ 2.78
SLC38A1-208ENST00000550173 POGZQ7Z3K3 1410 aa32.4■■■□□ 2.78
SLC38A1-208ENST00000550173 CASKIN1Q8WXD9 1431 aa32.39■■■□□ 2.78
SLC38A1-208ENST00000550173 PCF11O94913 1555 aaKnown RBP32.38■■■□□ 2.77
SLC38A1-208ENST00000550173 CCDC18Q5T9S5 1454 aa32.35■■■□□ 2.77
SLC38A1-208ENST00000550173 ARHGAP5Q13017 1502 aa32.34■■■□□ 2.77
SLC38A1-208ENST00000550173 RIMS1Q86UR5 1692 aaKnown RBP32.31■■■□□ 2.76
SLC38A1-208ENST00000550173 SIGLEC1Q9BZZ2 1709 aa32.29■■■□□ 2.76
SLC38A1-208ENST00000550173 MLECQ14165 292 aa32.26■■■□□ 2.75
SLC38A1-208ENST00000550173 FYCO1Q9BQS8 1478 aa32.26■■■□□ 2.75
SLC38A1-208ENST00000550173 ZNF518AQ6AHZ1 1483 aa32.25■■■□□ 2.75
SLC38A1-208ENST00000550173 ATP10AO60312 1499 aa32.24■■■□□ 2.75
SLC38A1-208ENST00000550173 CDC42BPBQ9Y5S2 1711 aa32.24■■■□□ 2.75
SLC38A1-208ENST00000550173 AFAP1Q8N556 730 aa32.23■■■□□ 2.75
SLC38A1-208ENST00000550173 ILDR1Q86SU0 546 aaPredicted RBP32.22■■■□□ 2.75
SLC38A1-208ENST00000550173 MYT1LQ9UL68 1186 aa32.21■■■□□ 2.75
SLC38A1-208ENST00000550173 C9orf84Q5VXU9 1444 aa32.2■■■□□ 2.75
SLC38A1-208ENST00000550173 PLPPR3Q6T4P5 718 aa32.2■■■□□ 2.75
SLC38A1-208ENST00000550173 PREX2Q70Z35 1606 aa32.19■■■□□ 2.74
SLC38A1-208ENST00000550173 KDM5CP41229 1560 aa32.17■■■□□ 2.74
SLC38A1-208ENST00000550173 FER1L4A9Z1Z3 1794 aa32.14■■■□□ 2.74
SLC38A1-208ENST00000550173 LMTK3Q96Q04 1460 aa32.12■■■□□ 2.73
SLC38A1-208ENST00000550173 CDC42BPAQ5VT25 1732 aa32.12■■■□□ 2.73
SLC38A1-208ENST00000550173 ABCC1P33527 1531 aa32.1■■■□□ 2.73
SLC38A1-208ENST00000550173 ARHGEF12Q9NZN5 1544 aa32.09■■■□□ 2.73
SLC38A1-208ENST00000550173 TRAPPC8Q9Y2L5 1435 aa32.09■■■□□ 2.73
SLC38A1-208ENST00000550173 ITSN2Q9NZM3 1697 aa32.07■■■□□ 2.72
SLC38A1-208ENST00000550173 DIP2CQ9Y2E4 1556 aa32.07■■■□□ 2.72
SLC38A1-208ENST00000550173 MLH3Q9UHC1 1453 aa32.06■■■□□ 2.72
SLC38A1-208ENST00000550173 ZNF777Q9ULD5 760 aaPredicted RBP32.05■■■□□ 2.72
SLC38A1-208ENST00000550173 ABCA6Q8N139 1617 aa32.02■■■□□ 2.72
SLC38A1-208ENST00000550173 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
SLC38A1-208ENST00000550173 HSPA2P54652 639 aa32■■■□□ 2.71
SLC38A1-208ENST00000550173 REREQ9P2R6 1566 aa31.99■■■□□ 2.71
SLC38A1-208ENST00000550173 MTUS2Q5JR59 1369 aa31.99■■■□□ 2.71
SLC38A1-208ENST00000550173 SAMD9LQ8IVG5 1584 aa31.97■■■□□ 2.71
SLC38A1-208ENST00000550173 CCNB3Q8WWL7 1395 aa31.95■■■□□ 2.71
SLC38A1-208ENST00000550173 CEP162Q5TB80 1403 aa31.95■■■□□ 2.71
SLC38A1-208ENST00000550173 CEBPAP49715 358 aaPredicted RBP31.95■■■□□ 2.71
SLC38A1-208ENST00000550173 KIDINS220Q9ULH0 1771 aa31.94■■■□□ 2.7
SLC38A1-208ENST00000550173 CFDP1Q9UEE9 299 aaPredicted RBP31.94■■■□□ 2.7
SLC38A1-208ENST00000550173 SYCP2Q9BX26 1530 aa31.93■■■□□ 2.7
SLC38A1-208ENST00000550173 HNRNPMP52272 730 aaKnown RBP eCLIP31.92■■■□□ 2.76e-7■■■■□ 23.4
SLC38A1-208ENST00000550173 AGLP35573 1532 aa31.9■■■□□ 2.7
SLC38A1-208ENST00000550173 SPAG9O60271 1321 aaKnown RBP31.88■■■□□ 2.69
SLC38A1-208ENST00000550173 PLEKHH2Q8IVE3 1493 aa31.87■■■□□ 2.69
SLC38A1-208ENST00000550173 ESF1Q9H501 851 aaKnown RBP31.87■■■□□ 2.69
SLC38A1-208ENST00000550173 KIAA1107Q9UPP5 1409 aa31.85■■■□□ 2.69
SLC38A1-208ENST00000550173 PREX1Q8TCU6 1659 aa31.85■■■□□ 2.69
SLC38A1-208ENST00000550173 EHBP1L1Q8N3D4 1523 aa31.84■■■□□ 2.69
SLC38A1-208ENST00000550173 FBXO41Q8TF61 875 aa31.8■■■□□ 2.68
SLC38A1-208ENST00000550173 TIAM1Q13009 1591 aa31.8■■■□□ 2.68
SLC38A1-208ENST00000550173 SETD1BQ9UPS6 1966 aaKnown RBP31.79■■■□□ 2.68
SLC38A1-208ENST00000550173 ATP7AQ04656 1500 aa31.78■■■□□ 2.68
SLC38A1-208ENST00000550173 C3P01024 1663 aa31.77■■■□□ 2.68
SLC38A1-208ENST00000550173 ZNF644Q9H582 1327 aaPredicted RBP31.75■■■□□ 2.67
SLC38A1-208ENST00000550173 UHRF1BP1Q6BDS2 1440 aa31.75■■■□□ 2.67
SLC38A1-208ENST00000550173 LOC105371045A0A1W2PR82 267 aa31.74■■■□□ 2.67
SLC38A1-208ENST00000550173 CNTLNQ9NXG0 1405 aa31.74■■■□□ 2.67
SLC38A1-208ENST00000550173 INO80Q9ULG1 1556 aaPredicted RBP31.73■■■□□ 2.67
SLC38A1-208ENST00000550173 SUPT6HQ7KZ85 1726 aaKnown RBP31.73■■■□□ 2.67
SLC38A1-208ENST00000550173 A2MP01023 1474 aa31.69■■■□□ 2.66
SLC38A1-208ENST00000550173 NCOA2Q15596 1464 aa31.65■■■□□ 2.66
SLC38A1-208ENST00000550173 MBD5Q9P267 1494 aa31.65■■■□□ 2.66
SLC38A1-208ENST00000550173 PLXNC1O60486 1568 aa31.64■■■□□ 2.66
SLC38A1-208ENST00000550173 MROH2AA6NES4 1674 aa31.62■■■□□ 2.65
SLC38A1-208ENST00000550173 VPS8Q8N3P4 1428 aa31.62■■■□□ 2.65
SLC38A1-208ENST00000550173 ADGBQ8N7X0 1667 aa31.61■■■□□ 2.65
SLC38A1-208ENST00000550173 GGT6Q6P531 493 aa31.61■■■□□ 2.65
SLC38A1-208ENST00000550173 ZMYM3Q14202 1370 aa31.6■■■□□ 2.65
SLC38A1-208ENST00000550173 DMRT2Q9Y5R5 561 aa31.6■■■□□ 2.65
SLC38A1-208ENST00000550173 STRCQ7RTU9 1775 aa31.6■■■□□ 2.65
SLC38A1-208ENST00000550173 RTEL1-TNFRSF6BF6WH68 1400 aa31.58■■■□□ 2.65
SLC38A1-208ENST00000550173 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
SLC38A1-208ENST00000550173 CLTCQ00610 1675 aaKnown RBP31.57■■■□□ 2.64
SLC38A1-208ENST00000550173 CERKQ8TCT0 537 aa31.56■■■□□ 2.64
SLC38A1-208ENST00000550173 NPATQ14207 1427 aa31.55■■■□□ 2.64
SLC38A1-208ENST00000550173 CCDC141Q6ZP82 1450 aa31.53■■■□□ 2.64
SLC38A1-208ENST00000550173 RSPH4AQ5TD94 716 aa31.52■■■□□ 2.64
SLC38A1-208ENST00000550173 LRRC9Q6ZRR7 1453 aa31.52■■■□□ 2.64
SLC38A1-208ENST00000550173 DHX29Q7Z478 1369 aaKnown RBP31.51■■■□□ 2.63
SLC38A1-208ENST00000550173 PPP6R1Q9UPN7 881 aa31.5■■■□□ 2.63
SLC38A1-208ENST00000550173 PTPRTO14522 1441 aa31.45■■■□□ 2.63
SLC38A1-208ENST00000550173 PTPRKQ15262 1439 aa31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 KIF3BO15066 747 aa31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 TSPY4P0CV99 314 aa31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 TSPY10P0CW01 314 aa31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 KANK4Q5T7N3 995 aaPredicted RBP31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 ARHGEF5Q12774 1597 aa31.43■■■□□ 2.62
SLC38A1-208ENST00000550173 NCOA1Q15788 1441 aa31.42■■■□□ 2.62
SLC38A1-208ENST00000550173 MAP3K1Q13233 1512 aa31.42■■■□□ 2.62
SLC38A1-208ENST00000550173 CAMSAP1Q5T5Y3 1602 aa31.4■■■□□ 2.62
SLC38A1-208ENST00000550173 MYO3AQ8NEV4 1616 aa31.37■■■□□ 2.61
SLC38A1-208ENST00000550173 ZNF142P52746 1687 aaPredicted RBP31.34■■■□□ 2.61
SLC38A1-208ENST00000550173 CEP170BQ9Y4F5 1589 aaPredicted RBP31.32■■■□□ 2.6
SLC38A1-208ENST00000550173 MYOM3Q5VTT5 1437 aa31.32■■■□□ 2.6
SLC38A1-208ENST00000550173 NCKAP5LQ9HCH0 1330 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms