RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 ITGAEP38570 1179 aa17.42■□□□□ 0.38
CTDSP2-206ENST00000550144 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
CTDSP2-206ENST00000550144 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
CTDSP2-206ENST00000550144 CAMSAP2Q08AD1 1489 aa17.39■□□□□ 0.37
CTDSP2-206ENST00000550144 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
CTDSP2-206ENST00000550144 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
CTDSP2-206ENST00000550144 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
CTDSP2-206ENST00000550144 PLCH2O75038 1416 aa17.38■□□□□ 0.37
CTDSP2-206ENST00000550144 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
CTDSP2-206ENST00000550144 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
CTDSP2-206ENST00000550144 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
CTDSP2-206ENST00000550144 DNMT1P26358 1616 aaKnown RBP17.33■□□□□ 0.37
CTDSP2-206ENST00000550144 SAMD9LQ8IVG5 1584 aa17.33■□□□□ 0.37
CTDSP2-206ENST00000550144 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
CTDSP2-206ENST00000550144 DAPK1P53355 1430 aa17.32■□□□□ 0.36
CTDSP2-206ENST00000550144 GLI2P10070 1586 aa17.32■□□□□ 0.36
CTDSP2-206ENST00000550144 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
CTDSP2-206ENST00000550144 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
CTDSP2-206ENST00000550144 ABCC5O15440 1437 aa17.3■□□□□ 0.36
CTDSP2-206ENST00000550144 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
CTDSP2-206ENST00000550144 ILDR1Q86SU0 546 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-206ENST00000550144 FANCAO15360 1455 aa17.29■□□□□ 0.36
CTDSP2-206ENST00000550144 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
CTDSP2-206ENST00000550144 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
CTDSP2-206ENST00000550144 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
CTDSP2-206ENST00000550144 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTDSP2-206ENST00000550144 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
CTDSP2-206ENST00000550144 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
CTDSP2-206ENST00000550144 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
CTDSP2-206ENST00000550144 MAP3K4Q9Y6R4 1608 aa17.26■□□□□ 0.35
CTDSP2-206ENST00000550144 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
CTDSP2-206ENST00000550144 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
CTDSP2-206ENST00000550144 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
CTDSP2-206ENST00000550144 ABCC1P33527 1531 aa17.25■□□□□ 0.35
CTDSP2-206ENST00000550144 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
CTDSP2-206ENST00000550144 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
CTDSP2-206ENST00000550144 SETD5Q9C0A6 1442 aa17.24■□□□□ 0.35
CTDSP2-206ENST00000550144 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
CTDSP2-206ENST00000550144 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
CTDSP2-206ENST00000550144 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
CTDSP2-206ENST00000550144 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
CTDSP2-206ENST00000550144 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
CTDSP2-206ENST00000550144 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
CTDSP2-206ENST00000550144 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.35
CTDSP2-206ENST00000550144 ADGRL1O94910 1474 aa17.21■□□□□ 0.35
CTDSP2-206ENST00000550144 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.34
CTDSP2-206ENST00000550144 NEO1Q92859 1461 aa17.2■□□□□ 0.34
CTDSP2-206ENST00000550144 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
CTDSP2-206ENST00000550144 NAIPQ13075 1403 aa17.2■□□□□ 0.34
CTDSP2-206ENST00000550144 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
CTDSP2-206ENST00000550144 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
CTDSP2-206ENST00000550144 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
CTDSP2-206ENST00000550144 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
CTDSP2-206ENST00000550144 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
CTDSP2-206ENST00000550144 HRCP23327 699 aa17.17■□□□□ 0.34
CTDSP2-206ENST00000550144 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
CTDSP2-206ENST00000550144 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
CTDSP2-206ENST00000550144 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
CTDSP2-206ENST00000550144 PPRC1Q5VV67 1664 aaKnown RBP17.16■□□□□ 0.34
CTDSP2-206ENST00000550144 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
CTDSP2-206ENST00000550144 AFAP1Q8N556 730 aa17.13■□□□□ 0.33
CTDSP2-206ENST00000550144 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
CTDSP2-206ENST00000550144 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
CTDSP2-206ENST00000550144 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-206ENST00000550144 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
CTDSP2-206ENST00000550144 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
CTDSP2-206ENST00000550144 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
CTDSP2-206ENST00000550144 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-206ENST00000550144 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
CTDSP2-206ENST00000550144 DENND4BO75064 1496 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-206ENST00000550144 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
CTDSP2-206ENST00000550144 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
CTDSP2-206ENST00000550144 KDM6BO15054 1643 aa17.07■□□□□ 0.32
CTDSP2-206ENST00000550144 INO80Q9ULG1 1556 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-206ENST00000550144 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
CTDSP2-206ENST00000550144 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
CTDSP2-206ENST00000550144 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
CTDSP2-206ENST00000550144 KDM5CP41229 1560 aa17.06■□□□□ 0.32
CTDSP2-206ENST00000550144 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
CTDSP2-206ENST00000550144 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-206ENST00000550144 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
CTDSP2-206ENST00000550144 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
CTDSP2-206ENST00000550144 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
CTDSP2-206ENST00000550144 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
CTDSP2-206ENST00000550144 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
CTDSP2-206ENST00000550144 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
CTDSP2-206ENST00000550144 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
CTDSP2-206ENST00000550144 KIDINS220Q9ULH0 1771 aa17.01■□□□□ 0.31
CTDSP2-206ENST00000550144 ERBINQ96RT1 1412 aa17■□□□□ 0.31
CTDSP2-206ENST00000550144 FRMPD1Q5SYB0 1578 aa16.99■□□□□ 0.31
CTDSP2-206ENST00000550144 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
CTDSP2-206ENST00000550144 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
CTDSP2-206ENST00000550144 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
CTDSP2-206ENST00000550144 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
CTDSP2-206ENST00000550144 MAGI2Q86UL8 1455 aa16.94■□□□□ 0.3
CTDSP2-206ENST00000550144 ABCA6Q8N139 1617 aa16.94■□□□□ 0.3
CTDSP2-206ENST00000550144 A2MP01023 1474 aa16.93■□□□□ 0.3
CTDSP2-206ENST00000550144 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
CTDSP2-206ENST00000550144 UNC13BO14795 1591 aa16.93■□□□□ 0.3
CTDSP2-206ENST00000550144 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms