RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
PFDN5-208ENST00000549995 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
PFDN5-208ENST00000549995 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
PFDN5-208ENST00000549995 AKNAQ7Z591 1439 aa18.9■□□□□ 0.62
PFDN5-208ENST00000549995 GPATCH8Q9UKJ3 1502 aaKnown RBP18.9■□□□□ 0.62
PFDN5-208ENST00000549995 ABCC1P33527 1531 aa18.88■□□□□ 0.61
PFDN5-208ENST00000549995 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
PFDN5-208ENST00000549995 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
PFDN5-208ENST00000549995 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
PFDN5-208ENST00000549995 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
PFDN5-208ENST00000549995 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
PFDN5-208ENST00000549995 KDM5CP41229 1560 aa18.83■□□□□ 0.6
PFDN5-208ENST00000549995 DENND4BO75064 1496 aaPredicted RBP18.83■□□□□ 0.6
PFDN5-208ENST00000549995 POGZQ7Z3K3 1410 aa18.83■□□□□ 0.6
PFDN5-208ENST00000549995 EFCAB2Q5VUJ9 269 aa18.81■□□□□ 0.6
PFDN5-208ENST00000549995 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
PFDN5-208ENST00000549995 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
PFDN5-208ENST00000549995 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
PFDN5-208ENST00000549995 ARHGEF12Q9NZN5 1544 aa18.78■□□□□ 0.6
PFDN5-208ENST00000549995 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
PFDN5-208ENST00000549995 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
PFDN5-208ENST00000549995 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
PFDN5-208ENST00000549995 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
PFDN5-208ENST00000549995 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
PFDN5-208ENST00000549995 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
PFDN5-208ENST00000549995 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
PFDN5-208ENST00000549995 HECW2Q9P2P5 1572 aa18.73■□□□□ 0.59
PFDN5-208ENST00000549995 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
PFDN5-208ENST00000549995 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
PFDN5-208ENST00000549995 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
PFDN5-208ENST00000549995 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
PFDN5-208ENST00000549995 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
PFDN5-208ENST00000549995 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
PFDN5-208ENST00000549995 ZFYVE16Q7Z3T8 1539 aa18.7■□□□□ 0.58
PFDN5-208ENST00000549995 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
PFDN5-208ENST00000549995 APLP2Q06481 763 aa18.7■□□□□ 0.58
PFDN5-208ENST00000549995 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
PFDN5-208ENST00000549995 TRAPPC8Q9Y2L5 1435 aa18.69■□□□□ 0.58
PFDN5-208ENST00000549995 KIDINS220Q9ULH0 1771 aa18.69■□□□□ 0.58
PFDN5-208ENST00000549995 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
PFDN5-208ENST00000549995 DIP2CQ9Y2E4 1556 aa18.67■□□□□ 0.58
PFDN5-208ENST00000549995 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
PFDN5-208ENST00000549995 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
PFDN5-208ENST00000549995 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
PFDN5-208ENST00000549995 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
PFDN5-208ENST00000549995 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
PFDN5-208ENST00000549995 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.57
PFDN5-208ENST00000549995 FGD6Q6ZV73 1430 aa18.63■□□□□ 0.57
PFDN5-208ENST00000549995 CCDC141Q6ZP82 1450 aa18.63■□□□□ 0.57
PFDN5-208ENST00000549995 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
PFDN5-208ENST00000549995 ATP7AQ04656 1500 aa18.62■□□□□ 0.57
PFDN5-208ENST00000549995 BCORL1Q5H9F3 1711 aa18.6■□□□□ 0.57
PFDN5-208ENST00000549995 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
PFDN5-208ENST00000549995 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
PFDN5-208ENST00000549995 ATP10AO60312 1499 aa18.59■□□□□ 0.57
PFDN5-208ENST00000549995 RTEL1-TNFRSF6BF6WH68 1400 aa18.59■□□□□ 0.57
PFDN5-208ENST00000549995 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
PFDN5-208ENST00000549995 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
PFDN5-208ENST00000549995 AFAP1Q8N556 730 aa18.59■□□□□ 0.57
PFDN5-208ENST00000549995 DNMT1P26358 1616 aaKnown RBP18.59■□□□□ 0.57
PFDN5-208ENST00000549995 ADAMTSL3P82987 1691 aa18.58■□□□□ 0.57
PFDN5-208ENST00000549995 AGLP35573 1532 aa18.58■□□□□ 0.56
PFDN5-208ENST00000549995 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
PFDN5-208ENST00000549995 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
PFDN5-208ENST00000549995 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
PFDN5-208ENST00000549995 RSPH4AQ5TD94 716 aa18.56■□□□□ 0.56
PFDN5-208ENST00000549995 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
PFDN5-208ENST00000549995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
PFDN5-208ENST00000549995 ABCC5O15440 1437 aa18.49■□□□□ 0.55
PFDN5-208ENST00000549995 DAPK1P53355 1430 aa18.49■□□□□ 0.55
PFDN5-208ENST00000549995 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
PFDN5-208ENST00000549995 A2MP01023 1474 aa18.47■□□□□ 0.55
PFDN5-208ENST00000549995 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
PFDN5-208ENST00000549995 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
PFDN5-208ENST00000549995 KDM4FA0A1W2PPD8 638 aa18.46■□□□□ 0.55
PFDN5-208ENST00000549995 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
PFDN5-208ENST00000549995 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
PFDN5-208ENST00000549995 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
PFDN5-208ENST00000549995 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
PFDN5-208ENST00000549995 DHX29Q7Z478 1369 aaKnown RBP18.42■□□□□ 0.54
PFDN5-208ENST00000549995 DUOX2Q9NRD8 1548 aa18.41■□□□□ 0.54
PFDN5-208ENST00000549995 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
PFDN5-208ENST00000549995 RIMS1Q86UR5 1692 aaKnown RBP18.4■□□□□ 0.54
PFDN5-208ENST00000549995 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
PFDN5-208ENST00000549995 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
PFDN5-208ENST00000549995 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
PFDN5-208ENST00000549995 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
PFDN5-208ENST00000549995 PTPRMP28827 1452 aa18.35■□□□□ 0.53
PFDN5-208ENST00000549995 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
PFDN5-208ENST00000549995 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
PFDN5-208ENST00000549995 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
PFDN5-208ENST00000549995 MYT1LQ9UL68 1186 aa18.34■□□□□ 0.53
PFDN5-208ENST00000549995 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
PFDN5-208ENST00000549995 ROCK1Q13464 1354 aa18.33■□□□□ 0.53
PFDN5-208ENST00000549995 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.52
PFDN5-208ENST00000549995 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
PFDN5-208ENST00000549995 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
PFDN5-208ENST00000549995 KDM5DQ9BY66 1539 aa18.32■□□□□ 0.52
PFDN5-208ENST00000549995 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
PFDN5-208ENST00000549995 C3P01024 1663 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms