RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
SYT1-208ENST00000549671 KIF3CO14782 793 aa12.68□□□□□ -0.38
SYT1-208ENST00000549671 EMP3P54852 163 aa12.68□□□□□ -0.38
SYT1-208ENST00000549671 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
SYT1-208ENST00000549671 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
SYT1-208ENST00000549671 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
SYT1-208ENST00000549671 PPP1R37O75864 691 aa12.6□□□□□ -0.39
SYT1-208ENST00000549671 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
SYT1-208ENST00000549671 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
SYT1-208ENST00000549671 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
SYT1-208ENST00000549671 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
SYT1-208ENST00000549671 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
SYT1-208ENST00000549671 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
SYT1-208ENST00000549671 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
SYT1-208ENST00000549671 SLC34A2O95436 690 aa12.54□□□□□ -0.4
SYT1-208ENST00000549671 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
SYT1-208ENST00000549671 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SYT1-208ENST00000549671 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
SYT1-208ENST00000549671 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
SYT1-208ENST00000549671 FOXK1P85037 733 aa12.46□□□□□ -0.41
SYT1-208ENST00000549671 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
SYT1-208ENST00000549671 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
SYT1-208ENST00000549671 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
SYT1-208ENST00000549671 VARS2Q5ST30 1063 aaKnown RBP12.43□□□□□ -0.42
SYT1-208ENST00000549671 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
SYT1-208ENST00000549671 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
SYT1-208ENST00000549671 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
SYT1-208ENST00000549671 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
SYT1-208ENST00000549671 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
SYT1-208ENST00000549671 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
SYT1-208ENST00000549671 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
SYT1-208ENST00000549671 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
SYT1-208ENST00000549671 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYT1-208ENST00000549671 DSG2Q14126 1118 aa12.35□□□□□ -0.43
SYT1-208ENST00000549671 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
SYT1-208ENST00000549671 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
SYT1-208ENST00000549671 NUDT7P0C024 238 aa12.33□□□□□ -0.44
SYT1-208ENST00000549671 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
SYT1-208ENST00000549671 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
SYT1-208ENST00000549671 PBX2P40425 430 aa12.29□□□□□ -0.44
SYT1-208ENST00000549671 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
SYT1-208ENST00000549671 PDE4AP27815 886 aa12.28□□□□□ -0.44
SYT1-208ENST00000549671 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
SYT1-208ENST00000549671 TBC1D12O60347 775 aa12.26□□□□□ -0.45
SYT1-208ENST00000549671 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
SYT1-208ENST00000549671 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
SYT1-208ENST00000549671 PTGER2P43116 358 aa12.24□□□□□ -0.45
SYT1-208ENST00000549671 MFSD10Q14728 455 aa12.24□□□□□ -0.45
SYT1-208ENST00000549671 BBXQ8WY36 941 aaPredicted RBP12.24□□□□□ -0.45
SYT1-208ENST00000549671 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYT1-208ENST00000549671 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
SYT1-208ENST00000549671 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
SYT1-208ENST00000549671 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
SYT1-208ENST00000549671 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
SYT1-208ENST00000549671 ARHGAP33O14559 1287 aa12.13□□□□□ -0.47
SYT1-208ENST00000549671 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
SYT1-208ENST00000549671 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
SYT1-208ENST00000549671 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
SYT1-208ENST00000549671 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
SYT1-208ENST00000549671 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
SYT1-208ENST00000549671 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
SYT1-208ENST00000549671 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYT1-208ENST00000549671 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
SYT1-208ENST00000549671 TK2O00142 265 aa12.07□□□□□ -0.48
SYT1-208ENST00000549671 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
SYT1-208ENST00000549671 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
SYT1-208ENST00000549671 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
SYT1-208ENST00000549671 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
SYT1-208ENST00000549671 FOSBP53539 338 aa12.05□□□□□ -0.48
SYT1-208ENST00000549671 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
SYT1-208ENST00000549671 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
SYT1-208ENST00000549671 EVI5O60447 810 aa12.03□□□□□ -0.48
SYT1-208ENST00000549671 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
SYT1-208ENST00000549671 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
SYT1-208ENST00000549671 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
SYT1-208ENST00000549671 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
SYT1-208ENST00000549671 MAP3K9P80192 1104 aa12□□□□□ -0.49
SYT1-208ENST00000549671 PSEN2P49810 448 aa11.99□□□□□ -0.49
SYT1-208ENST00000549671 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
SYT1-208ENST00000549671 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
SYT1-208ENST00000549671 HRO43593 1189 aa11.98□□□□□ -0.49
SYT1-208ENST00000549671 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
SYT1-208ENST00000549671 ZDHHC16Q969W1 377 aa11.94□□□□□ -0.5
SYT1-208ENST00000549671 PTPREP23469 700 aa11.93□□□□□ -0.5
SYT1-208ENST00000549671 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
SYT1-208ENST00000549671 PHF14O94880 888 aa11.9□□□□□ -0.5
SYT1-208ENST00000549671 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
SYT1-208ENST00000549671 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
SYT1-208ENST00000549671 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
SYT1-208ENST00000549671 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
SYT1-208ENST00000549671 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
SYT1-208ENST00000549671 DPYSL4O14531 572 aa11.87□□□□□ -0.51
SYT1-208ENST00000549671 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
SYT1-208ENST00000549671 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
SYT1-208ENST00000549671 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
SYT1-208ENST00000549671 PDIA6Q15084 440 aa11.85□□□□□ -0.51
SYT1-208ENST00000549671 EPAS1Q99814 870 aa11.85□□□□□ -0.51
SYT1-208ENST00000549671 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
SYT1-208ENST00000549671 BHMG1C9JSJ3 638 aaPredicted RBP11.84□□□□□ -0.51
SYT1-208ENST00000549671 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms