RNA–Protein interactions for RNA: ENST00000549355.1

PTPRQ-204, Transcript of protein tyrosine phosphatase, receptor type Q, humanhuman

TSL 4

Gene PTPRQ, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQ-204ENST00000549355 PBX2P40425 430 aa13.41□□□□□ -0.26
PTPRQ-204ENST00000549355 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
PTPRQ-204ENST00000549355 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
PTPRQ-204ENST00000549355 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
PTPRQ-204ENST00000549355 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
PTPRQ-204ENST00000549355 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
PTPRQ-204ENST00000549355 LHX6Q9UPM6 363 aa13.27□□□□□ -0.29
PTPRQ-204ENST00000549355 HRO43593 1189 aa13.26□□□□□ -0.29
PTPRQ-204ENST00000549355 NUDT7P0C024 238 aa13.26□□□□□ -0.29
PTPRQ-204ENST00000549355 SOX12O15370 315 aa13.25□□□□□ -0.29
PTPRQ-204ENST00000549355 RGS20O76081 388 aa13.23□□□□□ -0.29
PTPRQ-204ENST00000549355 KIF3CO14782 793 aa13.21□□□□□ -0.29
PTPRQ-204ENST00000549355 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
PTPRQ-204ENST00000549355 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
PTPRQ-204ENST00000549355 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
PTPRQ-204ENST00000549355 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
PTPRQ-204ENST00000549355 TK2O00142 265 aa13.16□□□□□ -0.3
PTPRQ-204ENST00000549355 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
PTPRQ-204ENST00000549355 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
PTPRQ-204ENST00000549355 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
PTPRQ-204ENST00000549355 SLC34A2O95436 690 aa13.13□□□□□ -0.31
PTPRQ-204ENST00000549355 DMRTA1Q5VZB9 504 aa13.12□□□□□ -0.31
PTPRQ-204ENST00000549355 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
PTPRQ-204ENST00000549355 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
PTPRQ-204ENST00000549355 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
PTPRQ-204ENST00000549355 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
PTPRQ-204ENST00000549355 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
PTPRQ-204ENST00000549355 PSEN2P49810 448 aa13.05□□□□□ -0.32
PTPRQ-204ENST00000549355 A0A0G2JS52 829 aa13.04□□□□□ -0.32
PTPRQ-204ENST00000549355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
PTPRQ-204ENST00000549355 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
PTPRQ-204ENST00000549355 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
PTPRQ-204ENST00000549355 TRIM41Q8WV44 630 aa13□□□□□ -0.33
PTPRQ-204ENST00000549355 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
PTPRQ-204ENST00000549355 NLRP6P59044 892 aa12.94□□□□□ -0.34
PTPRQ-204ENST00000549355 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
PTPRQ-204ENST00000549355 PTPN5P54829 565 aa12.92□□□□□ -0.34
PTPRQ-204ENST00000549355 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
PTPRQ-204ENST00000549355 MFRPQ9BY79 579 aa12.87□□□□□ -0.35
PTPRQ-204ENST00000549355 LCE2BO14633 110 aa12.86□□□□□ -0.35
PTPRQ-204ENST00000549355 VPS9D1Q9Y2B5 631 aa12.85□□□□□ -0.35
PTPRQ-204ENST00000549355 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
PTPRQ-204ENST00000549355 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
PTPRQ-204ENST00000549355 Q6ZNB5 142 aa12.82□□□□□ -0.36
PTPRQ-204ENST00000549355 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
PTPRQ-204ENST00000549355 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
PTPRQ-204ENST00000549355 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
PTPRQ-204ENST00000549355 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
PTPRQ-204ENST00000549355 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
PTPRQ-204ENST00000549355 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
PTPRQ-204ENST00000549355 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
PTPRQ-204ENST00000549355 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
PTPRQ-204ENST00000549355 WNT2BQ93097 391 aa12.65□□□□□ -0.38
PTPRQ-204ENST00000549355 FOXK1P85037 733 aa12.61□□□□□ -0.39
PTPRQ-204ENST00000549355 ZBED2Q9BTP6 218 aa12.61□□□□□ -0.39
PTPRQ-204ENST00000549355 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
PTPRQ-204ENST00000549355 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
PTPRQ-204ENST00000549355 PPP1R37O75864 691 aa12.59□□□□□ -0.39
PTPRQ-204ENST00000549355 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
PTPRQ-204ENST00000549355 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
PTPRQ-204ENST00000549355 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
PTPRQ-204ENST00000549355 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
PTPRQ-204ENST00000549355 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
PTPRQ-204ENST00000549355 GOLGA8CPA6NN73 597 aa12.52□□□□□ -0.41
PTPRQ-204ENST00000549355 TBC1D12O60347 775 aa12.5□□□□□ -0.41
PTPRQ-204ENST00000549355 DSG2Q14126 1118 aa12.49□□□□□ -0.41
PTPRQ-204ENST00000549355 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
PTPRQ-204ENST00000549355 ZNF454Q8N9F8 522 aa12.48□□□□□ -0.41
PTPRQ-204ENST00000549355 FOSBP53539 338 aa12.47□□□□□ -0.41
PTPRQ-204ENST00000549355 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
PTPRQ-204ENST00000549355 GFRA3O60609 400 aa12.46□□□□□ -0.41
PTPRQ-204ENST00000549355 STK25O00506 426 aa12.45□□□□□ -0.42
PTPRQ-204ENST00000549355 PTPREP23469 700 aa12.45□□□□□ -0.42
PTPRQ-204ENST00000549355 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
PTPRQ-204ENST00000549355 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
PTPRQ-204ENST00000549355 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
PTPRQ-204ENST00000549355 BCAMP50895 628 aa12.38□□□□□ -0.43
PTPRQ-204ENST00000549355 KCNC4Q03721 635 aa12.38□□□□□ -0.43
PTPRQ-204ENST00000549355 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
PTPRQ-204ENST00000549355 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
PTPRQ-204ENST00000549355 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
PTPRQ-204ENST00000549355 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
PTPRQ-204ENST00000549355 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
PTPRQ-204ENST00000549355 ZNF787Q6DD87 383 aa12.34□□□□□ -0.43
PTPRQ-204ENST00000549355 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
PTPRQ-204ENST00000549355 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
PTPRQ-204ENST00000549355 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
PTPRQ-204ENST00000549355 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
PTPRQ-204ENST00000549355 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPRQ-204ENST00000549355 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
PTPRQ-204ENST00000549355 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
PTPRQ-204ENST00000549355 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
PTPRQ-204ENST00000549355 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
PTPRQ-204ENST00000549355 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
PTPRQ-204ENST00000549355 COL9A1P20849 921 aa12.22□□□□□ -0.45
PTPRQ-204ENST00000549355 PRKD2Q9BZL6 878 aa12.22□□□□□ -0.45
PTPRQ-204ENST00000549355 EVI5O60447 810 aa12.16□□□□□ -0.46
PTPRQ-204ENST00000549355 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
PTPRQ-204ENST00000549355 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
PTPRQ-204ENST00000549355 RGL2O15211 777 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms