RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
PTPRR-209ENST00000549308 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.48
PTPRR-209ENST00000549308 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
PTPRR-209ENST00000549308 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
PTPRR-209ENST00000549308 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
PTPRR-209ENST00000549308 DAPK1P53355 1430 aa18.05■□□□□ 0.48
PTPRR-209ENST00000549308 PLCH2O75038 1416 aa18.04■□□□□ 0.48
PTPRR-209ENST00000549308 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
PTPRR-209ENST00000549308 SETD5Q9C0A6 1442 aa18.03■□□□□ 0.48
PTPRR-209ENST00000549308 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
PTPRR-209ENST00000549308 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
PTPRR-209ENST00000549308 ABCC5O15440 1437 aa18.02■□□□□ 0.48
PTPRR-209ENST00000549308 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
PTPRR-209ENST00000549308 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
PTPRR-209ENST00000549308 EFCAB2Q5VUJ9 269 aa18■□□□□ 0.47
PTPRR-209ENST00000549308 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
PTPRR-209ENST00000549308 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
PTPRR-209ENST00000549308 PLEKHH2Q8IVE3 1493 aa17.99■□□□□ 0.47
PTPRR-209ENST00000549308 HRCP23327 699 aa17.98■□□□□ 0.47
PTPRR-209ENST00000549308 ARHGEF5Q12774 1597 aa17.98■□□□□ 0.47
PTPRR-209ENST00000549308 HFM1A2PYH4 1435 aa17.97■□□□□ 0.47
PTPRR-209ENST00000549308 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTPRR-209ENST00000549308 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
PTPRR-209ENST00000549308 RRP7BPQ9NSQ0 103 aa17.96■□□□□ 0.47
PTPRR-209ENST00000549308 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
PTPRR-209ENST00000549308 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
PTPRR-209ENST00000549308 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
PTPRR-209ENST00000549308 NAIPQ13075 1403 aa17.95■□□□□ 0.46
PTPRR-209ENST00000549308 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
PTPRR-209ENST00000549308 MBD5Q9P267 1494 aa17.95■□□□□ 0.46
PTPRR-209ENST00000549308 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
PTPRR-209ENST00000549308 CD109Q6YHK3 1445 aa17.94■□□□□ 0.46
PTPRR-209ENST00000549308 FANCAO15360 1455 aa17.93■□□□□ 0.46
PTPRR-209ENST00000549308 SHANK2Q9UPX8 1470 aa17.93■□□□□ 0.46
PTPRR-209ENST00000549308 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
PTPRR-209ENST00000549308 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
PTPRR-209ENST00000549308 ABCC1P33527 1531 aa17.93■□□□□ 0.46
PTPRR-209ENST00000549308 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
PTPRR-209ENST00000549308 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
PTPRR-209ENST00000549308 C9orf84Q5VXU9 1444 aa17.91■□□□□ 0.46
PTPRR-209ENST00000549308 GLI2P10070 1586 aa17.91■□□□□ 0.46
PTPRR-209ENST00000549308 ADGRL2O95490 1459 aa17.91■□□□□ 0.46
PTPRR-209ENST00000549308 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
PTPRR-209ENST00000549308 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
PTPRR-209ENST00000549308 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
PTPRR-209ENST00000549308 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
PTPRR-209ENST00000549308 DIP2BQ9P265 1576 aa17.88■□□□□ 0.45
PTPRR-209ENST00000549308 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
PTPRR-209ENST00000549308 NCOA1Q15788 1441 aa17.87■□□□□ 0.45
PTPRR-209ENST00000549308 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
PTPRR-209ENST00000549308 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
PTPRR-209ENST00000549308 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
PTPRR-209ENST00000549308 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
PTPRR-209ENST00000549308 KDM6BO15054 1643 aa17.84■□□□□ 0.45
PTPRR-209ENST00000549308 TRAPPC8Q9Y2L5 1435 aa17.84■□□□□ 0.45
PTPRR-209ENST00000549308 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.45
PTPRR-209ENST00000549308 NEO1Q92859 1461 aa17.81■□□□□ 0.44
PTPRR-209ENST00000549308 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
PTPRR-209ENST00000549308 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
PTPRR-209ENST00000549308 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
PTPRR-209ENST00000549308 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
PTPRR-209ENST00000549308 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
PTPRR-209ENST00000549308 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
PTPRR-209ENST00000549308 AFAP1Q8N556 730 aa17.78■□□□□ 0.44
PTPRR-209ENST00000549308 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
PTPRR-209ENST00000549308 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
PTPRR-209ENST00000549308 KIF13AQ9H1H9 1805 aa17.77■□□□□ 0.43
PTPRR-209ENST00000549308 TSPOAP1O95153 1857 aa17.76■□□□□ 0.43
PTPRR-209ENST00000549308 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
PTPRR-209ENST00000549308 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
PTPRR-209ENST00000549308 ZFYVE16Q7Z3T8 1539 aa17.74■□□□□ 0.43
PTPRR-209ENST00000549308 ZNF518AQ6AHZ1 1483 aa17.74■□□□□ 0.43
PTPRR-209ENST00000549308 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
PTPRR-209ENST00000549308 INO80Q9ULG1 1556 aaPredicted RBP17.73■□□□□ 0.43
PTPRR-209ENST00000549308 POGZQ7Z3K3 1410 aa17.73■□□□□ 0.43
PTPRR-209ENST00000549308 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
PTPRR-209ENST00000549308 PPRC1Q5VV67 1664 aaKnown RBP17.73■□□□□ 0.43
PTPRR-209ENST00000549308 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
PTPRR-209ENST00000549308 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
PTPRR-209ENST00000549308 KDM5CP41229 1560 aa17.7■□□□□ 0.42
PTPRR-209ENST00000549308 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
PTPRR-209ENST00000549308 HECW2Q9P2P5 1572 aa17.67■□□□□ 0.42
PTPRR-209ENST00000549308 MPHOSPH9Q99550 1183 aa17.67■□□□□ 0.42
PTPRR-209ENST00000549308 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
PTPRR-209ENST00000549308 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
PTPRR-209ENST00000549308 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
PTPRR-209ENST00000549308 MLH3Q9UHC1 1453 aa17.65■□□□□ 0.42
PTPRR-209ENST00000549308 PZPP20742 1482 aa17.64■□□□□ 0.41
PTPRR-209ENST00000549308 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
PTPRR-209ENST00000549308 NUP155O75694 1391 aa17.64■□□□□ 0.41
PTPRR-209ENST00000549308 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
PTPRR-209ENST00000549308 UNC13BO14795 1591 aa17.63■□□□□ 0.41
PTPRR-209ENST00000549308 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
PTPRR-209ENST00000549308 DHX29Q7Z478 1369 aaKnown RBP17.61■□□□□ 0.41
PTPRR-209ENST00000549308 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
PTPRR-209ENST00000549308 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
PTPRR-209ENST00000549308 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
PTPRR-209ENST00000549308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
PTPRR-209ENST00000549308 ABCA6Q8N139 1617 aa17.59■□□□□ 0.41
PTPRR-209ENST00000549308 EIF2AK4Q9P2K8 1649 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms