RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 EFCAB2Q5VUJ9 269 aa31.71■■■□□ 2.67
SLC48A1-207ENST00000549243 FYCO1Q9BQS8 1478 aa31.71■■■□□ 2.67
SLC48A1-207ENST00000549243 ARHGAP5Q13017 1502 aa31.7■■■□□ 2.66
SLC48A1-207ENST00000549243 HECW2Q9P2P5 1572 aa31.69■■■□□ 2.66
SLC48A1-207ENST00000549243 ZFYVE16Q7Z3T8 1539 aa31.69■■■□□ 2.66
SLC48A1-207ENST00000549243 POGZQ7Z3K3 1410 aa31.68■■■□□ 2.66
SLC48A1-207ENST00000549243 YEATS2Q9ULM3 1422 aa31.67■■■□□ 2.66
SLC48A1-207ENST00000549243 CDC42BPBQ9Y5S2 1711 aa31.66■■■□□ 2.66
SLC48A1-207ENST00000549243 MADDQ8WXG6 1647 aa31.64■■■□□ 2.66
SLC48A1-207ENST00000549243 MAGI2Q86UL8 1455 aa31.62■■■□□ 2.65
SLC48A1-207ENST00000549243 SIGLEC1Q9BZZ2 1709 aa31.62■■■□□ 2.65
SLC48A1-207ENST00000549243 PTPRMP28827 1452 aa31.61■■■□□ 2.65
SLC48A1-207ENST00000549243 PREX2Q70Z35 1606 aa31.6■■■□□ 2.65
SLC48A1-207ENST00000549243 RIMS1Q86UR5 1692 aaKnown RBP31.57■■■□□ 2.64
SLC48A1-207ENST00000549243 CDC42BPAQ5VT25 1732 aa31.56■■■□□ 2.64
SLC48A1-207ENST00000549243 ZNF518AQ6AHZ1 1483 aa31.53■■■□□ 2.64
SLC48A1-207ENST00000549243 AFAP1Q8N556 730 aa31.51■■■□□ 2.63
SLC48A1-207ENST00000549243 CEP162Q5TB80 1403 aa31.5■■■□□ 2.63
SLC48A1-207ENST00000549243 KDM5CP41229 1560 aa31.49■■■□□ 2.63
SLC48A1-207ENST00000549243 ATP10AO60312 1499 aa31.48■■■□□ 2.63
SLC48A1-207ENST00000549243 MLECQ14165 292 aa31.48■■■□□ 2.63
SLC48A1-207ENST00000549243 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
SLC48A1-207ENST00000549243 MYT1LQ9UL68 1186 aa31.47■■■□□ 2.63
SLC48A1-207ENST00000549243 ABCC1P33527 1531 aa31.47■■■□□ 2.63
SLC48A1-207ENST00000549243 C9orf84Q5VXU9 1444 aa31.45■■■□□ 2.63
SLC48A1-207ENST00000549243 ARHGEF12Q9NZN5 1544 aa31.44■■■□□ 2.62
SLC48A1-207ENST00000549243 FER1L4A9Z1Z3 1794 aa31.44■■■□□ 2.62
SLC48A1-207ENST00000549243 PLPPR3Q6T4P5 718 aa31.43■■■□□ 2.62
SLC48A1-207ENST00000549243 TRAPPC8Q9Y2L5 1435 aa31.41■■■□□ 2.62
SLC48A1-207ENST00000549243 ZNF777Q9ULD5 760 aaPredicted RBP31.41■■■□□ 2.62
SLC48A1-207ENST00000549243 MTUS2Q5JR59 1369 aa31.4■■■□□ 2.62
SLC48A1-207ENST00000549243 DIP2CQ9Y2E4 1556 aa31.39■■■□□ 2.62
SLC48A1-207ENST00000549243 GPATCH8Q9UKJ3 1502 aaKnown RBP31.39■■■□□ 2.61
SLC48A1-207ENST00000549243 SAMD9LQ8IVG5 1584 aa31.38■■■□□ 2.61
SLC48A1-207ENST00000549243 ABCA6Q8N139 1617 aa31.38■■■□□ 2.61
SLC48A1-207ENST00000549243 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
SLC48A1-207ENST00000549243 MLH3Q9UHC1 1453 aa31.34■■■□□ 2.61
SLC48A1-207ENST00000549243 CCNB3Q8WWL7 1395 aa31.32■■■□□ 2.6
SLC48A1-207ENST00000549243 SYCP2Q9BX26 1530 aa31.32■■■□□ 2.6
SLC48A1-207ENST00000549243 KIDINS220Q9ULH0 1771 aa31.31■■■□□ 2.6
SLC48A1-207ENST00000549243 EHBP1L1Q8N3D4 1523 aa31.3■■■□□ 2.6
SLC48A1-207ENST00000549243 CFDP1Q9UEE9 299 aaPredicted RBP31.29■■■□□ 2.6
SLC48A1-207ENST00000549243 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
SLC48A1-207ENST00000549243 REREQ9P2R6 1566 aa31.27■■■□□ 2.6
SLC48A1-207ENST00000549243 HNRNPMP52272 730 aaKnown RBP eCLIP31.26■■■□□ 2.59
SLC48A1-207ENST00000549243 TIAM1Q13009 1591 aa31.26■■■□□ 2.59
SLC48A1-207ENST00000549243 PLEKHH2Q8IVE3 1493 aa31.2■■■□□ 2.58
SLC48A1-207ENST00000549243 SPAG9O60271 1321 aaKnown RBP31.19■■■□□ 2.58
SLC48A1-207ENST00000549243 KIAA1107Q9UPP5 1409 aa31.17■■■□□ 2.58
SLC48A1-207ENST00000549243 CEBPAP49715 358 aaPredicted RBP31.17■■■□□ 2.58
SLC48A1-207ENST00000549243 AGLP35573 1532 aa31.17■■■□□ 2.58
SLC48A1-207ENST00000549243 HSPA2P54652 639 aa31.16■■■□□ 2.58
SLC48A1-207ENST00000549243 SUPT6HQ7KZ85 1726 aaKnown RBP31.15■■■□□ 2.58
SLC48A1-207ENST00000549243 ZNF644Q9H582 1327 aaPredicted RBP31.15■■■□□ 2.58
SLC48A1-207ENST00000549243 VPS8Q8N3P4 1428 aa31.15■■■□□ 2.58
SLC48A1-207ENST00000549243 ATP7AQ04656 1500 aa31.14■■■□□ 2.58
SLC48A1-207ENST00000549243 INO80Q9ULG1 1556 aaPredicted RBP31.13■■■□□ 2.57
SLC48A1-207ENST00000549243 NCOA2Q15596 1464 aa31.11■■■□□ 2.57
SLC48A1-207ENST00000549243 ILDR1Q86SU0 546 aaPredicted RBP31.11■■■□□ 2.57
SLC48A1-207ENST00000549243 PREX1Q8TCU6 1659 aa31.09■■■□□ 2.57
SLC48A1-207ENST00000549243 ESF1Q9H501 851 aaKnown RBP31.08■■■□□ 2.57
SLC48A1-207ENST00000549243 C3P01024 1663 aa31.08■■■□□ 2.57
SLC48A1-207ENST00000549243 MBD5Q9P267 1494 aa31.03■■■□□ 2.56
SLC48A1-207ENST00000549243 SETD1BQ9UPS6 1966 aaKnown RBP31.03■■■□□ 2.56
SLC48A1-207ENST00000549243 A2MP01023 1474 aa31.01■■■□□ 2.56
SLC48A1-207ENST00000549243 LRRC9Q6ZRR7 1453 aa31.01■■■□□ 2.55
SLC48A1-207ENST00000549243 PLXNC1O60486 1568 aa31■■■□□ 2.55
SLC48A1-207ENST00000549243 ADGBQ8N7X0 1667 aa31■■■□□ 2.55
SLC48A1-207ENST00000549243 CAMSAP2Q08AD1 1489 aa31■■■□□ 2.55
SLC48A1-207ENST00000549243 CNTLNQ9NXG0 1405 aa30.96■■■□□ 2.55
SLC48A1-207ENST00000549243 UHRF1BP1Q6BDS2 1440 aa30.94■■■□□ 2.54
SLC48A1-207ENST00000549243 KANK4Q5T7N3 995 aaPredicted RBP30.93■■■□□ 2.54
SLC48A1-207ENST00000549243 CCDC141Q6ZP82 1450 aa30.93■■■□□ 2.54
SLC48A1-207ENST00000549243 MROH2AA6NES4 1674 aa30.93■■■□□ 2.54
SLC48A1-207ENST00000549243 CLTCQ00610 1675 aaKnown RBP30.93■■■□□ 2.54
SLC48A1-207ENST00000549243 MAP3K1Q13233 1512 aa30.91■■■□□ 2.54
SLC48A1-207ENST00000549243 RTEL1-TNFRSF6BF6WH68 1400 aa30.9■■■□□ 2.54
SLC48A1-207ENST00000549243 GGT6Q6P531 493 aa30.9■■■□□ 2.54
SLC48A1-207ENST00000549243 STRCQ7RTU9 1775 aa30.84■■■□□ 2.53
SLC48A1-207ENST00000549243 ARHGEF5Q12774 1597 aa30.84■■■□□ 2.53
SLC48A1-207ENST00000549243 ZMYM3Q14202 1370 aa30.84■■■□□ 2.53
SLC48A1-207ENST00000549243 RSPH4AQ5TD94 716 aa30.82■■■□□ 2.52
SLC48A1-207ENST00000549243 DHX29Q7Z478 1369 aaKnown RBP30.81■■■□□ 2.52
SLC48A1-207ENST00000549243 APLP2Q06481 763 aa30.78■■■□□ 2.52
SLC48A1-207ENST00000549243 MYOM3Q5VTT5 1437 aa30.78■■■□□ 2.52
SLC48A1-207ENST00000549243 TSPY4P0CV99 314 aa30.77■■■□□ 2.52
SLC48A1-207ENST00000549243 TSPY10P0CW01 314 aa30.77■■■□□ 2.52
SLC48A1-207ENST00000549243 NPATQ14207 1427 aa30.77■■■□□ 2.52
SLC48A1-207ENST00000549243 KIF3BO15066 747 aa30.75■■■□□ 2.51
SLC48A1-207ENST00000549243 FBXO41Q8TF61 875 aa30.74■■■□□ 2.51
SLC48A1-207ENST00000549243 PPP6R1Q9UPN7 881 aa30.72■■■□□ 2.51
SLC48A1-207ENST00000549243 MIA2Q96PC5 1412 aa30.72■■■□□ 2.51
SLC48A1-207ENST00000549243 MYO3AQ8NEV4 1616 aa30.7■■■□□ 2.51
SLC48A1-207ENST00000549243 PTPRKQ15262 1439 aa30.7■■■□□ 2.5
SLC48A1-207ENST00000549243 MAST1Q9Y2H9 1570 aa30.69■■■□□ 2.5
SLC48A1-207ENST00000549243 DMRT2Q9Y5R5 561 aa30.68■■■□□ 2.5
SLC48A1-207ENST00000549243 CAMSAP1Q5T5Y3 1602 aa30.65■■■□□ 2.5
SLC48A1-207ENST00000549243 ZNF142P52746 1687 aaPredicted RBP30.65■■■□□ 2.5
SLC48A1-207ENST00000549243 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
SLC48A1-207ENST00000549243 NCOA1Q15788 1441 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms