RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
CACNB3-211ENST00000549226 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
CACNB3-211ENST00000549226 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
CACNB3-211ENST00000549226 PLEKHH2Q8IVE3 1493 aa21.41■■□□□ 1.02
CACNB3-211ENST00000549226 EFCAB2Q5VUJ9 269 aa21.4■■□□□ 1.02
CACNB3-211ENST00000549226 ARHGAP5Q13017 1502 aa21.39■■□□□ 1.02
CACNB3-211ENST00000549226 CAMSAP2Q08AD1 1489 aa21.39■■□□□ 1.01
CACNB3-211ENST00000549226 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
CACNB3-211ENST00000549226 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
CACNB3-211ENST00000549226 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
CACNB3-211ENST00000549226 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
CACNB3-211ENST00000549226 CDC42BPBQ9Y5S2 1711 aa21.34■■□□□ 1.01
CACNB3-211ENST00000549226 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
CACNB3-211ENST00000549226 FANCAO15360 1455 aa21.32■■□□□ 1
CACNB3-211ENST00000549226 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
CACNB3-211ENST00000549226 FAM69CQ0P6D2 419 aa21.31■■□□□ 1
CACNB3-211ENST00000549226 ZNF644Q9H582 1327 aaPredicted RBP21.3■■□□□ 1
CACNB3-211ENST00000549226 ARHGEF5Q12774 1597 aa21.3■■□□□ 1
CACNB3-211ENST00000549226 SAMD9LQ8IVG5 1584 aa21.3■■□□□ 1
CACNB3-211ENST00000549226 DAPK1P53355 1430 aa21.29■■□□□ 1
CACNB3-211ENST00000549226 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
CACNB3-211ENST00000549226 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
CACNB3-211ENST00000549226 NEO1Q92859 1461 aa21.29■■□□□ 1
CACNB3-211ENST00000549226 SHANK2Q9UPX8 1470 aa21.28■■□□□ 1
CACNB3-211ENST00000549226 MBD5Q9P267 1494 aa21.27■■□□□ 1
CACNB3-211ENST00000549226 ABCC1P33527 1531 aa21.27■■□□□ 1
CACNB3-211ENST00000549226 ABCC5O15440 1437 aa21.27■■□□□ 1
CACNB3-211ENST00000549226 AKNAQ7Z591 1439 aa21.27■■□□□ 1
CACNB3-211ENST00000549226 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
CACNB3-211ENST00000549226 TEX14Q8IWB6 1497 aa21.26■□□□□ 0.99
CACNB3-211ENST00000549226 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
CACNB3-211ENST00000549226 ITGAEP38570 1179 aa21.24■□□□□ 0.99
CACNB3-211ENST00000549226 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
CACNB3-211ENST00000549226 ADGRL1O94910 1474 aa21.22■□□□□ 0.99
CACNB3-211ENST00000549226 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
CACNB3-211ENST00000549226 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
CACNB3-211ENST00000549226 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
CACNB3-211ENST00000549226 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
CACNB3-211ENST00000549226 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
CACNB3-211ENST00000549226 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
CACNB3-211ENST00000549226 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
CACNB3-211ENST00000549226 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
CACNB3-211ENST00000549226 SCAPERQ9BY12 1400 aa21.18■□□□□ 0.98
CACNB3-211ENST00000549226 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
CACNB3-211ENST00000549226 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
CACNB3-211ENST00000549226 ARHGEF12Q9NZN5 1544 aa21.17■□□□□ 0.98
CACNB3-211ENST00000549226 MAST1Q9Y2H9 1570 aa21.17■□□□□ 0.98
CACNB3-211ENST00000549226 HRCP23327 699 aa21.16■□□□□ 0.98
CACNB3-211ENST00000549226 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
CACNB3-211ENST00000549226 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
CACNB3-211ENST00000549226 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
CACNB3-211ENST00000549226 KIF13AQ9H1H9 1805 aa21.14■□□□□ 0.97
CACNB3-211ENST00000549226 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
CACNB3-211ENST00000549226 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
CACNB3-211ENST00000549226 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
CACNB3-211ENST00000549226 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
CACNB3-211ENST00000549226 NAIPQ13075 1403 aa21.12■□□□□ 0.97
CACNB3-211ENST00000549226 CHIC2Q9UKJ5 165 aa21.11■□□□□ 0.97
CACNB3-211ENST00000549226 ADGBQ8N7X0 1667 aa21.11■□□□□ 0.97
CACNB3-211ENST00000549226 SPAG9O60271 1321 aaKnown RBP21.09■□□□□ 0.97
CACNB3-211ENST00000549226 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
CACNB3-211ENST00000549226 PLXNC1O60486 1568 aa21.07■□□□□ 0.96
CACNB3-211ENST00000549226 KDM5CP41229 1560 aa21.07■□□□□ 0.96
CACNB3-211ENST00000549226 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
CACNB3-211ENST00000549226 GCC2Q8IWJ2 1684 aa21.06■□□□□ 0.96
CACNB3-211ENST00000549226 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
CACNB3-211ENST00000549226 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
CACNB3-211ENST00000549226 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
CACNB3-211ENST00000549226 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
CACNB3-211ENST00000549226 MLH3Q9UHC1 1453 aa21.05■□□□□ 0.96
CACNB3-211ENST00000549226 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
CACNB3-211ENST00000549226 INO80Q9ULG1 1556 aaPredicted RBP21.03■□□□□ 0.96
CACNB3-211ENST00000549226 ATP7AQ04656 1500 aa21.02■□□□□ 0.96
CACNB3-211ENST00000549226 ANKRD50Q9ULJ7 1429 aa21.01■□□□□ 0.95
CACNB3-211ENST00000549226 DUOX2Q9NRD8 1548 aa21■□□□□ 0.95
CACNB3-211ENST00000549226 MAGI2Q86UL8 1455 aa21■□□□□ 0.95
CACNB3-211ENST00000549226 ZMYM4Q5VZL5 1548 aa20.99■□□□□ 0.95
CACNB3-211ENST00000549226 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
CACNB3-211ENST00000549226 ERBINQ96RT1 1412 aa20.99■□□□□ 0.95
CACNB3-211ENST00000549226 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
CACNB3-211ENST00000549226 RICTORQ6R327 1708 aa20.96■□□□□ 0.95
CACNB3-211ENST00000549226 RAPGEF3O95398 923 aa20.95■□□□□ 0.94
CACNB3-211ENST00000549226 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
CACNB3-211ENST00000549226 FRMPD1Q5SYB0 1578 aa20.93■□□□□ 0.94
CACNB3-211ENST00000549226 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
CACNB3-211ENST00000549226 KIDINS220Q9ULH0 1771 aa20.91■□□□□ 0.94
CACNB3-211ENST00000549226 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
CACNB3-211ENST00000549226 A2MP01023 1474 aa20.88■□□□□ 0.93
CACNB3-211ENST00000549226 DHX57Q6P158 1386 aaKnown RBP20.88■□□□□ 0.93
CACNB3-211ENST00000549226 CCER1Q8TC90 406 aaPredicted RBP20.88■□□□□ 0.93
CACNB3-211ENST00000549226 COL17A1Q9UMD9 1497 aaPredicted RBP20.87■□□□□ 0.93
CACNB3-211ENST00000549226 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
CACNB3-211ENST00000549226 KDM6BO15054 1643 aa20.86■□□□□ 0.93
CACNB3-211ENST00000549226 KDM5DQ9BY66 1539 aa20.85■□□□□ 0.93
CACNB3-211ENST00000549226 DIP2CQ9Y2E4 1556 aa20.85■□□□□ 0.93
CACNB3-211ENST00000549226 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
CACNB3-211ENST00000549226 ABCA6Q8N139 1617 aa20.84■□□□□ 0.93
CACNB3-211ENST00000549226 REREQ9P2R6 1566 aa20.84■□□□□ 0.93
CACNB3-211ENST00000549226 ATP10AO60312 1499 aa20.82■□□□□ 0.92
CACNB3-211ENST00000549226 UNC13BO14795 1591 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms