RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
EFCAB2-215ENST00000549220 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
EFCAB2-215ENST00000549220 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
EFCAB2-215ENST00000549220 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
EFCAB2-215ENST00000549220 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
EFCAB2-215ENST00000549220 STK25O00506 426 aa11.38□□□□□ -0.59
EFCAB2-215ENST00000549220 NLRP6P59044 892 aa11.37□□□□□ -0.59
EFCAB2-215ENST00000549220 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
EFCAB2-215ENST00000549220 KIF3CO14782 793 aa11.32□□□□□ -0.6
EFCAB2-215ENST00000549220 G3V3G9 751 aa11.3□□□□□ -0.6
EFCAB2-215ENST00000549220 PPP1R37O75864 691 aa11.3□□□□□ -0.6
EFCAB2-215ENST00000549220 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
EFCAB2-215ENST00000549220 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
EFCAB2-215ENST00000549220 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
EFCAB2-215ENST00000549220 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
EFCAB2-215ENST00000549220 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
EFCAB2-215ENST00000549220 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
EFCAB2-215ENST00000549220 GPR153Q6NV75 609 aa11.25□□□□□ -0.61
EFCAB2-215ENST00000549220 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
EFCAB2-215ENST00000549220 EMP3P54852 163 aa11.24□□□□□ -0.61
EFCAB2-215ENST00000549220 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
EFCAB2-215ENST00000549220 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
EFCAB2-215ENST00000549220 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
EFCAB2-215ENST00000549220 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
EFCAB2-215ENST00000549220 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
EFCAB2-215ENST00000549220 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
EFCAB2-215ENST00000549220 ZNF710Q8N1W2 664 aa11.14□□□□□ -0.63
EFCAB2-215ENST00000549220 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.632e-8■□□□□ 8.7
EFCAB2-215ENST00000549220 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
EFCAB2-215ENST00000549220 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
EFCAB2-215ENST00000549220 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
EFCAB2-215ENST00000549220 SLC34A2O95436 690 aa11.1□□□□□ -0.63
EFCAB2-215ENST00000549220 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
EFCAB2-215ENST00000549220 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
EFCAB2-215ENST00000549220 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
EFCAB2-215ENST00000549220 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
EFCAB2-215ENST00000549220 VARS2Q5ST30 1063 aaKnown RBP11.07□□□□□ -0.64
EFCAB2-215ENST00000549220 ERBB3P21860 1342 aa11.07□□□□□ -0.64
EFCAB2-215ENST00000549220 ZNF687Q8N1G0 1237 aa11.04□□□□□ -0.64
EFCAB2-215ENST00000549220 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
EFCAB2-215ENST00000549220 FOXK1P85037 733 aa11.02□□□□□ -0.65
EFCAB2-215ENST00000549220 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
EFCAB2-215ENST00000549220 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
EFCAB2-215ENST00000549220 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
EFCAB2-215ENST00000549220 POTEEQ6S8J3 1075 aa11.01□□□□□ -0.65
EFCAB2-215ENST00000549220 TMC2Q8TDI7 906 aa11□□□□□ -0.65
EFCAB2-215ENST00000549220 DSG2Q14126 1118 aa10.99□□□□□ -0.65
EFCAB2-215ENST00000549220 NUDT7P0C024 238 aa10.98□□□□□ -0.65
EFCAB2-215ENST00000549220 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
EFCAB2-215ENST00000549220 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
EFCAB2-215ENST00000549220 SMARCA4P51532 1647 aa10.96□□□□□ -0.65
EFCAB2-215ENST00000549220 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
EFCAB2-215ENST00000549220 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
EFCAB2-215ENST00000549220 PLPP6Q8IY26 295 aa10.95□□□□□ -0.66
EFCAB2-215ENST00000549220 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
EFCAB2-215ENST00000549220 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
EFCAB2-215ENST00000549220 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
EFCAB2-215ENST00000549220 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
EFCAB2-215ENST00000549220 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
EFCAB2-215ENST00000549220 CADPS2Q86UW7 1296 aa10.85□□□□□ -0.67
EFCAB2-215ENST00000549220 WIZO95785 1651 aa10.85□□□□□ -0.67
EFCAB2-215ENST00000549220 LSM11P83369 360 aaKnown RBP eCLIP10.83□□□□□ -0.68
EFCAB2-215ENST00000549220 MFSD10Q14728 455 aa10.83□□□□□ -0.68
EFCAB2-215ENST00000549220 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
EFCAB2-215ENST00000549220 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
EFCAB2-215ENST00000549220 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
EFCAB2-215ENST00000549220 ATAD2BQ9ULI0 1458 aa10.8□□□□□ -0.68
EFCAB2-215ENST00000549220 PBX2P40425 430 aa10.79□□□□□ -0.68
EFCAB2-215ENST00000549220 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
EFCAB2-215ENST00000549220 PDE4AP27815 886 aa10.77□□□□□ -0.69
EFCAB2-215ENST00000549220 ANO8Q9HCE9 1232 aaPredicted RBP10.77□□□□□ -0.69
EFCAB2-215ENST00000549220 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
EFCAB2-215ENST00000549220 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
EFCAB2-215ENST00000549220 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
EFCAB2-215ENST00000549220 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
EFCAB2-215ENST00000549220 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
EFCAB2-215ENST00000549220 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
EFCAB2-215ENST00000549220 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
EFCAB2-215ENST00000549220 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
EFCAB2-215ENST00000549220 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
EFCAB2-215ENST00000549220 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
EFCAB2-215ENST00000549220 PSDA5PKW4 1024 aaPredicted RBP10.73□□□□□ -0.69
EFCAB2-215ENST00000549220 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
EFCAB2-215ENST00000549220 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
EFCAB2-215ENST00000549220 HRO43593 1189 aa10.71□□□□□ -0.69
EFCAB2-215ENST00000549220 PSEN2P49810 448 aa10.71□□□□□ -0.69
EFCAB2-215ENST00000549220 TBC1D12O60347 775 aa10.7□□□□□ -0.7
EFCAB2-215ENST00000549220 PTGER2P43116 358 aa10.7□□□□□ -0.7
EFCAB2-215ENST00000549220 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
EFCAB2-215ENST00000549220 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
EFCAB2-215ENST00000549220 RSF1Q96T23 1441 aaPredicted RBP10.69□□□□□ -0.7
EFCAB2-215ENST00000549220 FOSBP53539 338 aa10.68□□□□□ -0.7
EFCAB2-215ENST00000549220 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
EFCAB2-215ENST00000549220 ADGRD1Q6QNK2 874 aa10.68□□□□□ -0.7
EFCAB2-215ENST00000549220 TK2O00142 265 aa10.66□□□□□ -0.7
EFCAB2-215ENST00000549220 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
EFCAB2-215ENST00000549220 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
EFCAB2-215ENST00000549220 EVI5O60447 810 aa10.64□□□□□ -0.71
EFCAB2-215ENST00000549220 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
EFCAB2-215ENST00000549220 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms