RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 ARHGAP5Q13017 1502 aa40.88■■■■■ 4.13
CHPT1-204ENST00000549128 ARAP3Q8WWN8 1544 aa40.87■■■■■ 4.13
CHPT1-204ENST00000549128 EFCAB2Q5VUJ9 269 aa40.86■■■■■ 4.13
CHPT1-204ENST00000549128 CFDP1Q9UEE9 299 aaPredicted RBP40.85■■■■■ 4.13
CHPT1-204ENST00000549128 NEO1Q92859 1461 aa40.8■■■■■ 4.12
CHPT1-204ENST00000549128 ZNF777Q9ULD5 760 aaPredicted RBP40.8■■■■■ 4.12
CHPT1-204ENST00000549128 MYOM3Q5VTT5 1437 aa40.79■■■■■ 4.12
CHPT1-204ENST00000549128 ITSN2Q9NZM3 1697 aa40.79■■■■■ 4.12
CHPT1-204ENST00000549128 AKNAQ7Z591 1439 aa40.79■■■■■ 4.12
CHPT1-204ENST00000549128 ZNF644Q9H582 1327 aaPredicted RBP40.75■■■■■ 4.11
CHPT1-204ENST00000549128 COL17A1Q9UMD9 1497 aaPredicted RBP40.74■■■■■ 4.11
CHPT1-204ENST00000549128 CFAP74Q9C0B2 1584 aa40.72■■■■■ 4.11
CHPT1-204ENST00000549128 SAMD9LQ8IVG5 1584 aa40.7■■■■■ 4.11
CHPT1-204ENST00000549128 ADGRL1O94910 1474 aa40.68■■■■■ 4.1
CHPT1-204ENST00000549128 MIA2Q96PC5 1412 aa40.66■■■■■ 4.1
CHPT1-204ENST00000549128 FGD6Q6ZV73 1430 aa40.65■■■■■ 4.1
CHPT1-204ENST00000549128 SCAPERQ9BY12 1400 aa40.65■■■■■ 4.1
CHPT1-204ENST00000549128 ARHGEF12Q9NZN5 1544 aa40.64■■■■■ 4.1
CHPT1-204ENST00000549128 ABCC1P33527 1531 aa40.62■■■■■ 4.09
CHPT1-204ENST00000549128 KDM6BO15054 1643 aa40.61■■■■■ 4.09
CHPT1-204ENST00000549128 RAPGEF3O95398 923 aa40.61■■■■■ 4.09
CHPT1-204ENST00000549128 CAMSAP2Q08AD1 1489 aa40.6■■■■■ 4.09
CHPT1-204ENST00000549128 HNRNPMP52272 730 aaKnown RBP eCLIP40.6■■■■■ 4.099e-7■■■■■ 28.4
CHPT1-204ENST00000549128 SYCP2Q9BX26 1530 aa40.56■■■■■ 4.08
CHPT1-204ENST00000549128 DENND4BO75064 1496 aaPredicted RBP40.56■■■■■ 4.08
CHPT1-204ENST00000549128 PTPN23Q9H3S7 1636 aa40.55■■■■■ 4.08
CHPT1-204ENST00000549128 KIAA1107Q9UPP5 1409 aa40.54■■■■■ 4.08
CHPT1-204ENST00000549128 TRAPPC8Q9Y2L5 1435 aa40.53■■■■■ 4.08
CHPT1-204ENST00000549128 PLEKHH2Q8IVE3 1493 aa40.52■■■■■ 4.08
CHPT1-204ENST00000549128 AFAP1Q8N556 730 aa40.52■■■■■ 4.08
CHPT1-204ENST00000549128 MBD5Q9P267 1494 aa40.5■■■■■ 4.07
CHPT1-204ENST00000549128 POGZQ7Z3K3 1410 aa40.5■■■■■ 4.07
CHPT1-204ENST00000549128 TCOF1Q13428 1488 aaKnown RBP40.5■■■■■ 4.07
CHPT1-204ENST00000549128 FRMPD1Q5SYB0 1578 aa40.49■■■■■ 4.07
CHPT1-204ENST00000549128 RICTORQ6R327 1708 aa40.47■■■■■ 4.07
CHPT1-204ENST00000549128 FAM50AQ14320 339 aaKnown RBP40.46■■■■■ 4.07
CHPT1-204ENST00000549128 ZNF518AQ6AHZ1 1483 aa40.41■■■■■ 4.06
CHPT1-204ENST00000549128 RRBP1Q9P2E9 1410 aaKnown RBP40.41■■■■■ 4.06
CHPT1-204ENST00000549128 KDM5CP41229 1560 aa40.35■■■■■ 4.05
CHPT1-204ENST00000549128 ARHGEF5Q12774 1597 aa40.35■■■■■ 4.05
CHPT1-204ENST00000549128 CCDC141Q6ZP82 1450 aa40.33■■■■■ 4.05
CHPT1-204ENST00000549128 RSPH4AQ5TD94 716 aa40.31■■■■■ 4.04
CHPT1-204ENST00000549128 ZMYM4Q5VZL5 1548 aa40.3■■■■■ 4.04
CHPT1-204ENST00000549128 ABCC5O15440 1437 aa40.3■■■■■ 4.04
CHPT1-204ENST00000549128 SPAG9O60271 1321 aaKnown RBP40.27■■■■■ 4.04
CHPT1-204ENST00000549128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.26■■■■■ 4.046e-6■□□□□ 11
CHPT1-204ENST00000549128 DAPK1P53355 1430 aa40.26■■■■■ 4.04
CHPT1-204ENST00000549128 DNMT1P26358 1616 aaKnown RBP40.26■■■■■ 4.03
CHPT1-204ENST00000549128 YEATS2Q9ULM3 1422 aa40.24■■■■■ 4.03
CHPT1-204ENST00000549128 MYT1LQ9UL68 1186 aa40.24■■■■■ 4.03
CHPT1-204ENST00000549128 MLH3Q9UHC1 1453 aa40.24■■■■■ 4.03
CHPT1-204ENST00000549128 HECW2Q9P2P5 1572 aa40.22■■■■■ 4.03
CHPT1-204ENST00000549128 TSPY4P0CV99 314 aa40.22■■■■■ 4.03
CHPT1-204ENST00000549128 TSPY10P0CW01 314 aa40.22■■■■■ 4.03
CHPT1-204ENST00000549128 ITGAEP38570 1179 aa40.2■■■■■ 4.03
CHPT1-204ENST00000549128 KIDINS220Q9ULH0 1771 aa40.19■■■■■ 4.02
CHPT1-204ENST00000549128 MAGI2Q86UL8 1455 aa40.19■■■■■ 4.02
CHPT1-204ENST00000549128 PTPRKQ15262 1439 aa40.18■■■■■ 4.02
CHPT1-204ENST00000549128 ZFYVE16Q7Z3T8 1539 aa40.17■■■■■ 4.02
CHPT1-204ENST00000549128 INO80Q9ULG1 1556 aaPredicted RBP40.17■■■■■ 4.02
CHPT1-204ENST00000549128 ATP7AQ04656 1500 aa40.16■■■■■ 4.02
CHPT1-204ENST00000549128 CHIC2Q9UKJ5 165 aa40.16■■■■■ 4.02
CHPT1-204ENST00000549128 CROCC2H7BZ55 1655 aa40.16■■■■■ 4.02
CHPT1-204ENST00000549128 C9orf84Q5VXU9 1444 aa40.16■■■■■ 4.02
CHPT1-204ENST00000549128 RTEL1-TNFRSF6BF6WH68 1400 aa40.13■■■■■ 4.01
CHPT1-204ENST00000549128 SHANK2Q9UPX8 1470 aa40.11■■■■■ 4.01
CHPT1-204ENST00000549128 MAST1Q9Y2H9 1570 aa40.11■■■■■ 4.01
CHPT1-204ENST00000549128 ARHGEF40Q8TER5 1519 aa40.1■■■■■ 4.01
CHPT1-204ENST00000549128 ABCA6Q8N139 1617 aa40.1■■■■■ 4.01
CHPT1-204ENST00000549128 DIP2CQ9Y2E4 1556 aa40.08■■■■■ 4.01
CHPT1-204ENST00000549128 ATP10AO60312 1499 aa40.03■■■■■ 4
CHPT1-204ENST00000549128 RRP7BPQ9NSQ0 103 aa39.99■■■■□ 3.99
CHPT1-204ENST00000549128 NCOA1Q15788 1441 aa39.97■■■■□ 3.99
CHPT1-204ENST00000549128 ADGRL2O95490 1459 aa39.96■■■■□ 3.99
CHPT1-204ENST00000549128 ANKRD30AQ9BXX3 1397 aa39.95■■■■□ 3.99
CHPT1-204ENST00000549128 PLXNC1O60486 1568 aa39.95■■■■□ 3.99
CHPT1-204ENST00000549128 ADGBQ8N7X0 1667 aa39.94■■■■□ 3.98
CHPT1-204ENST00000549128 SIGLEC1Q9BZZ2 1709 aa39.94■■■■□ 3.98
CHPT1-204ENST00000549128 A2MP01023 1474 aa39.92■■■■□ 3.98
CHPT1-204ENST00000549128 KIF15Q9NS87 1388 aa39.91■■■■□ 3.98
CHPT1-204ENST00000549128 ROCK1Q13464 1354 aa39.89■■■■□ 3.98
CHPT1-204ENST00000549128 DHX29Q7Z478 1369 aaKnown RBP39.88■■■■□ 3.97
CHPT1-204ENST00000549128 REREQ9P2R6 1566 aa39.87■■■■□ 3.97
CHPT1-204ENST00000549128 ARID4BQ4LE39 1312 aaPredicted RBP39.83■■■■□ 3.97
CHPT1-204ENST00000549128 DUOX2Q9NRD8 1548 aa39.81■■■■□ 3.96
CHPT1-204ENST00000549128 TRIM26Q12899 539 aaPredicted RBP39.78■■■■□ 3.96
CHPT1-204ENST00000549128 AGLP35573 1532 aa39.76■■■■□ 3.96
CHPT1-204ENST00000549128 KIF3BO15066 747 aa39.73■■■■□ 3.95
CHPT1-204ENST00000549128 MLECQ14165 292 aa39.73■■■■□ 3.95
CHPT1-204ENST00000549128 NAIPQ13075 1403 aa39.72■■■■□ 3.95
CHPT1-204ENST00000549128 ANKRD50Q9ULJ7 1429 aa39.71■■■■□ 3.95
CHPT1-204ENST00000549128 ERBINQ96RT1 1412 aa39.71■■■■□ 3.95
CHPT1-204ENST00000549128 HFM1A2PYH4 1435 aa39.69■■■■□ 3.94
CHPT1-204ENST00000549128 GGT6Q6P531 493 aa39.65■■■■□ 3.94
CHPT1-204ENST00000549128 EIF2AK4Q9P2K8 1649 aaKnown RBP39.63■■■■□ 3.93
CHPT1-204ENST00000549128 BCORL1Q5H9F3 1711 aa39.62■■■■□ 3.93
CHPT1-204ENST00000549128 GCC2Q8IWJ2 1684 aa39.62■■■■□ 3.93
CHPT1-204ENST00000549128 RNF17Q9BXT8 1623 aaKnown RBP39.53■■■■□ 3.92
CHPT1-204ENST00000549128 MROH1Q8NDA8 1641 aa39.53■■■■□ 3.92
CHPT1-204ENST00000549128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.52■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms