RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
TMCC3-202ENST00000548918 IFNL1Q8IU54 200 aa9.15□□□□□ -0.94
TMCC3-202ENST00000548918 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
TMCC3-202ENST00000548918 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
TMCC3-202ENST00000548918 APBB1O00213 710 aa9.13□□□□□ -0.95
TMCC3-202ENST00000548918 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
TMCC3-202ENST00000548918 ZNF316A6NFI3 1004 aaPredicted RBP9.11□□□□□ -0.95
TMCC3-202ENST00000548918 ONECUT3O60422 494 aaPredicted RBP9.1□□□□□ -0.95
TMCC3-202ENST00000548918 RBM42Q9BTD8 480 aaKnown RBP9.09□□□□□ -0.95
TMCC3-202ENST00000548918 FARP1Q9Y4F1 1045 aaPredicted RBP9.07□□□□□ -0.96
TMCC3-202ENST00000548918 MAP3K13O43283 966 aa9.06□□□□□ -0.96
TMCC3-202ENST00000548918 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
TMCC3-202ENST00000548918 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
TMCC3-202ENST00000548918 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
TMCC3-202ENST00000548918 DPYSL4O14531 572 aa9.03□□□□□ -0.96
TMCC3-202ENST00000548918 PARP9Q8IXQ6 854 aa9.03□□□□□ -0.96
TMCC3-202ENST00000548918 FLIIQ13045 1269 aa9.02□□□□□ -0.97
TMCC3-202ENST00000548918 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
TMCC3-202ENST00000548918 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
TMCC3-202ENST00000548918 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
TMCC3-202ENST00000548918 PDIA6Q15084 440 aa9.01□□□□□ -0.97
TMCC3-202ENST00000548918 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
TMCC3-202ENST00000548918 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
TMCC3-202ENST00000548918 A6NJR5 290 aa8.99□□□□□ -0.97
TMCC3-202ENST00000548918 TRAK2O60296 914 aa8.99□□□□□ -0.97
TMCC3-202ENST00000548918 AMHR2Q16671 573 aa8.99□□□□□ -0.97
TMCC3-202ENST00000548918 MINK1Q8N4C8 1332 aaPredicted RBP8.98□□□□□ -0.97
TMCC3-202ENST00000548918 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
TMCC3-202ENST00000548918 IRF6O14896 467 aa8.96□□□□□ -0.98
TMCC3-202ENST00000548918 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
TMCC3-202ENST00000548918 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.98
TMCC3-202ENST00000548918 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
TMCC3-202ENST00000548918 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
TMCC3-202ENST00000548918 FECHP22830 423 aa8.95□□□□□ -0.98
TMCC3-202ENST00000548918 CACNB1Q02641 598 aaPredicted RBP8.95□□□□□ -0.98
TMCC3-202ENST00000548918 GOPCQ9HD26 462 aa8.93□□□□□ -0.98
TMCC3-202ENST00000548918 DSG2Q14126 1118 aa8.92□□□□□ -0.98
TMCC3-202ENST00000548918 MS4A1P11836 297 aa8.91□□□□□ -0.98
TMCC3-202ENST00000548918 MCM6Q14566 821 aa8.91□□□□□ -0.98
TMCC3-202ENST00000548918 NUTM2FA1L443 756 aa8.9□□□□□ -0.98
TMCC3-202ENST00000548918 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
TMCC3-202ENST00000548918 TRPC6Q9Y210 931 aa8.89□□□□□ -0.99
TMCC3-202ENST00000548918 POM121Q96HA1 1249 aa8.88□□□□□ -0.99
TMCC3-202ENST00000548918 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
TMCC3-202ENST00000548918 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
TMCC3-202ENST00000548918 GNPATO15228 680 aa8.87□□□□□ -0.99
TMCC3-202ENST00000548918 OSBPP22059 807 aa8.87□□□□□ -0.99
TMCC3-202ENST00000548918 FNBP4Q8N3X1 1017 aaPredicted RBP8.87□□□□□ -0.99
TMCC3-202ENST00000548918 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
TMCC3-202ENST00000548918 PRKAR2AP13861 404 aaKnown RBP8.86□□□□□ -0.99
TMCC3-202ENST00000548918 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
TMCC3-202ENST00000548918 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
TMCC3-202ENST00000548918 ILDR1Q86SU0 546 aaPredicted RBP8.86□□□□□ -0.99
TMCC3-202ENST00000548918 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
TMCC3-202ENST00000548918 TTLL12Q14166 644 aaPredicted RBP8.85□□□□□ -0.99
TMCC3-202ENST00000548918 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
TMCC3-202ENST00000548918 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
TMCC3-202ENST00000548918 TMEM106CQ9BVX2 250 aa8.85□□□□□ -0.99
TMCC3-202ENST00000548918 PROSER2Q86WR7 435 aaPredicted RBP8.84□□□□□ -0.99
TMCC3-202ENST00000548918 PHF12Q96QT6 1004 aa8.84□□□□□ -0.99
TMCC3-202ENST00000548918 FOXK1P85037 733 aa8.82□□□□□ -1
TMCC3-202ENST00000548918 HIC1Q14526 733 aa8.82□□□□□ -1
TMCC3-202ENST00000548918 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
TMCC3-202ENST00000548918 SH3D19Q5HYK7 790 aa8.81□□□□□ -1
TMCC3-202ENST00000548918 FCHSD2O94868 740 aa8.8□□□□□ -1
TMCC3-202ENST00000548918 GOLGA2Q08379 1002 aa8.8□□□□□ -1
TMCC3-202ENST00000548918 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
TMCC3-202ENST00000548918 TMUB1Q9BVT8 246 aa8.79□□□□□ -1
TMCC3-202ENST00000548918 PLPP6Q8IY26 295 aa8.78□□□□□ -1
TMCC3-202ENST00000548918 RGS22Q8NE09 1264 aa8.78□□□□□ -1
TMCC3-202ENST00000548918 RETREG2Q8NC44 543 aa8.77□□□□□ -1.01
TMCC3-202ENST00000548918 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
TMCC3-202ENST00000548918 RAD21O60216 631 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
TMCC3-202ENST00000548918 PTGDRQ13258 359 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 IRF5Q13568 498 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 MICALL2Q8IY33 904 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
TMCC3-202ENST00000548918 DDX12PQ92771 950 aa8.75□□□□□ -1.01
TMCC3-202ENST00000548918 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
TMCC3-202ENST00000548918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
TMCC3-202ENST00000548918 PTGER2P43116 358 aa8.74□□□□□ -1.01
TMCC3-202ENST00000548918 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
TMCC3-202ENST00000548918 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
TMCC3-202ENST00000548918 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
TMCC3-202ENST00000548918 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
TMCC3-202ENST00000548918 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
TMCC3-202ENST00000548918 C2orf72A6NCS6 295 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 KIF3CO14782 793 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 MAP3K9P80192 1104 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
TMCC3-202ENST00000548918 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
TMCC3-202ENST00000548918 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
TMCC3-202ENST00000548918 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
TMCC3-202ENST00000548918 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
TMCC3-202ENST00000548918 SNRKQ9NRH2 765 aa8.7□□□□□ -1.02
TMCC3-202ENST00000548918 MDM2Q00987 491 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms