RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
NCKAP1L-205ENST00000548916 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
NCKAP1L-205ENST00000548916 PBX2P40425 430 aa13.22□□□□□ -0.29
NCKAP1L-205ENST00000548916 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
NCKAP1L-205ENST00000548916 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
NCKAP1L-205ENST00000548916 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
NCKAP1L-205ENST00000548916 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
NCKAP1L-205ENST00000548916 SOX12O15370 315 aa13.06□□□□□ -0.32
NCKAP1L-205ENST00000548916 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
NCKAP1L-205ENST00000548916 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
NCKAP1L-205ENST00000548916 NUDT7P0C024 238 aa13.02□□□□□ -0.33
NCKAP1L-205ENST00000548916 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
NCKAP1L-205ENST00000548916 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
NCKAP1L-205ENST00000548916 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1L-205ENST00000548916 RGS20O76081 388 aa12.98□□□□□ -0.33
NCKAP1L-205ENST00000548916 PKD2Q13563 968 aa12.98□□□□□ -0.33
NCKAP1L-205ENST00000548916 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
NCKAP1L-205ENST00000548916 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
NCKAP1L-205ENST00000548916 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
NCKAP1L-205ENST00000548916 ARHGAP33O14559 1287 aa12.94□□□□□ -0.34
NCKAP1L-205ENST00000548916 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
NCKAP1L-205ENST00000548916 TK2O00142 265 aa12.91□□□□□ -0.34
NCKAP1L-205ENST00000548916 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
NCKAP1L-205ENST00000548916 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
NCKAP1L-205ENST00000548916 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
NCKAP1L-205ENST00000548916 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
NCKAP1L-205ENST00000548916 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
NCKAP1L-205ENST00000548916 HRO43593 1189 aa12.84□□□□□ -0.35
NCKAP1L-205ENST00000548916 SLC34A2O95436 690 aa12.84□□□□□ -0.35
NCKAP1L-205ENST00000548916 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
NCKAP1L-205ENST00000548916 NLRP6P59044 892 aa12.82□□□□□ -0.36
NCKAP1L-205ENST00000548916 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
NCKAP1L-205ENST00000548916 KIF3CO14782 793 aa12.81□□□□□ -0.36
NCKAP1L-205ENST00000548916 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
NCKAP1L-205ENST00000548916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
NCKAP1L-205ENST00000548916 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
NCKAP1L-205ENST00000548916 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
NCKAP1L-205ENST00000548916 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
NCKAP1L-205ENST00000548916 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
NCKAP1L-205ENST00000548916 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
NCKAP1L-205ENST00000548916 PTPN5P54829 565 aa12.75□□□□□ -0.37
NCKAP1L-205ENST00000548916 A0A0G2JS52 829 aa12.74□□□□□ -0.37
NCKAP1L-205ENST00000548916 PSEN2P49810 448 aa12.74□□□□□ -0.37
NCKAP1L-205ENST00000548916 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
NCKAP1L-205ENST00000548916 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
NCKAP1L-205ENST00000548916 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
NCKAP1L-205ENST00000548916 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
NCKAP1L-205ENST00000548916 Q6ZNB5 142 aa12.67□□□□□ -0.38
NCKAP1L-205ENST00000548916 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
NCKAP1L-205ENST00000548916 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
NCKAP1L-205ENST00000548916 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
NCKAP1L-205ENST00000548916 RGL2O15211 777 aa12.62□□□□□ -0.39
NCKAP1L-205ENST00000548916 KCNK17Q96T54 332 aa12.6□□□□□ -0.39
NCKAP1L-205ENST00000548916 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
NCKAP1L-205ENST00000548916 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
NCKAP1L-205ENST00000548916 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
NCKAP1L-205ENST00000548916 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
NCKAP1L-205ENST00000548916 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
NCKAP1L-205ENST00000548916 MFRPQ9BY79 579 aa12.57□□□□□ -0.4
NCKAP1L-205ENST00000548916 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
NCKAP1L-205ENST00000548916 GOLGA8CPA6NN73 597 aa12.55□□□□□ -0.4
NCKAP1L-205ENST00000548916 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
NCKAP1L-205ENST00000548916 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
NCKAP1L-205ENST00000548916 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
NCKAP1L-205ENST00000548916 WNT2BQ93097 391 aa12.5□□□□□ -0.41
NCKAP1L-205ENST00000548916 TBC1D12O60347 775 aa12.49□□□□□ -0.41
NCKAP1L-205ENST00000548916 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
NCKAP1L-205ENST00000548916 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
NCKAP1L-205ENST00000548916 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
NCKAP1L-205ENST00000548916 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
NCKAP1L-205ENST00000548916 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
NCKAP1L-205ENST00000548916 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
NCKAP1L-205ENST00000548916 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
NCKAP1L-205ENST00000548916 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
NCKAP1L-205ENST00000548916 STK25O00506 426 aa12.4□□□□□ -0.42
NCKAP1L-205ENST00000548916 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
NCKAP1L-205ENST00000548916 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
NCKAP1L-205ENST00000548916 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
NCKAP1L-205ENST00000548916 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
NCKAP1L-205ENST00000548916 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
NCKAP1L-205ENST00000548916 FOXK1P85037 733 aa12.37□□□□□ -0.43
NCKAP1L-205ENST00000548916 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
NCKAP1L-205ENST00000548916 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
NCKAP1L-205ENST00000548916 BCANQ96GW7 911 aa12.36□□□□□ -0.43
NCKAP1L-205ENST00000548916 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
NCKAP1L-205ENST00000548916 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
NCKAP1L-205ENST00000548916 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
NCKAP1L-205ENST00000548916 PTPREP23469 700 aa12.34□□□□□ -0.43
NCKAP1L-205ENST00000548916 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
NCKAP1L-205ENST00000548916 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
NCKAP1L-205ENST00000548916 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
NCKAP1L-205ENST00000548916 GFRA3O60609 400 aa12.27□□□□□ -0.45
NCKAP1L-205ENST00000548916 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
NCKAP1L-205ENST00000548916 LCE2BO14633 110 aa12.25□□□□□ -0.45
NCKAP1L-205ENST00000548916 PPP1R37O75864 691 aa12.24□□□□□ -0.45
NCKAP1L-205ENST00000548916 KCNC4Q03721 635 aa12.24□□□□□ -0.45
NCKAP1L-205ENST00000548916 DSG2Q14126 1118 aa12.24□□□□□ -0.45
NCKAP1L-205ENST00000548916 NYAP1Q6ZVC0 841 aa12.24□□□□□ -0.45
NCKAP1L-205ENST00000548916 FOSBP53539 338 aa12.21□□□□□ -0.45
NCKAP1L-205ENST00000548916 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms