RNA–Protein interactions for RNA: ENST00000548886.1

RMST-205, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 1 (best)

Gene RMST, Length 1,047 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-205ENST00000548886 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
RMST-205ENST00000548886 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
RMST-205ENST00000548886 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
RMST-205ENST00000548886 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
RMST-205ENST00000548886 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
RMST-205ENST00000548886 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
RMST-205ENST00000548886 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
RMST-205ENST00000548886 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
RMST-205ENST00000548886 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
RMST-205ENST00000548886 EMP3P54852 163 aa11.46□□□□□ -0.57
RMST-205ENST00000548886 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
RMST-205ENST00000548886 PCDH10Q9P2E7 1040 aa11.46□□□□□ -0.57
RMST-205ENST00000548886 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
RMST-205ENST00000548886 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
RMST-205ENST00000548886 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
RMST-205ENST00000548886 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
RMST-205ENST00000548886 TMC2Q8TDI7 906 aa11.4□□□□□ -0.58
RMST-205ENST00000548886 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
RMST-205ENST00000548886 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
RMST-205ENST00000548886 KIF3CO14782 793 aa11.37□□□□□ -0.59
RMST-205ENST00000548886 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
RMST-205ENST00000548886 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
RMST-205ENST00000548886 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
RMST-205ENST00000548886 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
RMST-205ENST00000548886 ERBB3P21860 1342 aa11.32□□□□□ -0.6
RMST-205ENST00000548886 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
RMST-205ENST00000548886 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
RMST-205ENST00000548886 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
RMST-205ENST00000548886 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
RMST-205ENST00000548886 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
RMST-205ENST00000548886 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
RMST-205ENST00000548886 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
RMST-205ENST00000548886 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
RMST-205ENST00000548886 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
RMST-205ENST00000548886 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
RMST-205ENST00000548886 PDE4AP27815 886 aa11.26□□□□□ -0.61
RMST-205ENST00000548886 DSG2Q14126 1118 aa11.25□□□□□ -0.61
RMST-205ENST00000548886 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
RMST-205ENST00000548886 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
RMST-205ENST00000548886 FOXK1P85037 733 aa11.23□□□□□ -0.61
RMST-205ENST00000548886 PCDHGA4Q9Y5G9 962 aa11.22□□□□□ -0.61
RMST-205ENST00000548886 SLC34A2O95436 690 aa11.21□□□□□ -0.61
RMST-205ENST00000548886 NUDT7P0C024 238 aa11.21□□□□□ -0.61
RMST-205ENST00000548886 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
RMST-205ENST00000548886 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
RMST-205ENST00000548886 ZNF316A6NFI3 1004 aaPredicted RBP11.18□□□□□ -0.62
RMST-205ENST00000548886 MFSD10Q14728 455 aa11.18□□□□□ -0.62
RMST-205ENST00000548886 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
RMST-205ENST00000548886 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
RMST-205ENST00000548886 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
RMST-205ENST00000548886 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
RMST-205ENST00000548886 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
RMST-205ENST00000548886 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
RMST-205ENST00000548886 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
RMST-205ENST00000548886 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
RMST-205ENST00000548886 TBC1D12O60347 775 aa11.11□□□□□ -0.63
RMST-205ENST00000548886 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
RMST-205ENST00000548886 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
RMST-205ENST00000548886 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
RMST-205ENST00000548886 CAMK2BQ13554 666 aa11.05□□□□□ -0.64
RMST-205ENST00000548886 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
RMST-205ENST00000548886 E2F4Q16254 413 aa11.04□□□□□ -0.64
RMST-205ENST00000548886 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
RMST-205ENST00000548886 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
RMST-205ENST00000548886 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
RMST-205ENST00000548886 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
RMST-205ENST00000548886 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
RMST-205ENST00000548886 DPYSL4O14531 572 aa10.99□□□□□ -0.65
RMST-205ENST00000548886 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
RMST-205ENST00000548886 PBX2P40425 430 aa10.98□□□□□ -0.65
RMST-205ENST00000548886 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
RMST-205ENST00000548886 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
RMST-205ENST00000548886 LSM11P83369 360 aaKnown RBP eCLIP10.97□□□□□ -0.65
RMST-205ENST00000548886 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
RMST-205ENST00000548886 EVI5O60447 810 aa10.94□□□□□ -0.66
RMST-205ENST00000548886 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
RMST-205ENST00000548886 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
RMST-205ENST00000548886 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
RMST-205ENST00000548886 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
RMST-205ENST00000548886 PSEN2P49810 448 aa10.9□□□□□ -0.66
RMST-205ENST00000548886 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
RMST-205ENST00000548886 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
RMST-205ENST00000548886 PTGER2P43116 358 aa10.88□□□□□ -0.67
RMST-205ENST00000548886 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
RMST-205ENST00000548886 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
RMST-205ENST00000548886 FOSBP53539 338 aa10.87□□□□□ -0.67
RMST-205ENST00000548886 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
RMST-205ENST00000548886 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
RMST-205ENST00000548886 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
RMST-205ENST00000548886 PDIA6Q15084 440 aa10.86□□□□□ -0.67
RMST-205ENST00000548886 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
RMST-205ENST00000548886 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
RMST-205ENST00000548886 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
RMST-205ENST00000548886 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.68
RMST-205ENST00000548886 DDX12PQ92771 950 aa10.83□□□□□ -0.68
RMST-205ENST00000548886 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
RMST-205ENST00000548886 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
RMST-205ENST00000548886 PTPREP23469 700 aa10.8□□□□□ -0.68
RMST-205ENST00000548886 TK2O00142 265 aa10.79□□□□□ -0.68
RMST-205ENST00000548886 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms