RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 RGL2O15211 777 aa12.92□□□□□ -0.34
ARPC3-208ENST00000548878 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
ARPC3-208ENST00000548878 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
ARPC3-208ENST00000548878 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
ARPC3-208ENST00000548878 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
ARPC3-208ENST00000548878 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
ARPC3-208ENST00000548878 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
ARPC3-208ENST00000548878 ERBB3P21860 1342 aa12.84□□□□□ -0.35
ARPC3-208ENST00000548878 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
ARPC3-208ENST00000548878 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
ARPC3-208ENST00000548878 GPR153Q6NV75 609 aa12.81□□□□□ -0.36
ARPC3-208ENST00000548878 KIF3CO14782 793 aa12.77□□□□□ -0.37
ARPC3-208ENST00000548878 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
ARPC3-208ENST00000548878 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
ARPC3-208ENST00000548878 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
ARPC3-208ENST00000548878 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
ARPC3-208ENST00000548878 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
ARPC3-208ENST00000548878 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
ARPC3-208ENST00000548878 SLC34A2O95436 690 aa12.68□□□□□ -0.38
ARPC3-208ENST00000548878 PPP1R37O75864 691 aa12.67□□□□□ -0.38
ARPC3-208ENST00000548878 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
ARPC3-208ENST00000548878 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
ARPC3-208ENST00000548878 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.392e-14■□□□□ 8.2
ARPC3-208ENST00000548878 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
ARPC3-208ENST00000548878 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
ARPC3-208ENST00000548878 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
ARPC3-208ENST00000548878 NUDT7P0C024 238 aa12.55□□□□□ -0.4
ARPC3-208ENST00000548878 PTGER2P43116 358 aa12.54□□□□□ -0.4
ARPC3-208ENST00000548878 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
ARPC3-208ENST00000548878 FOXK1P85037 733 aa12.53□□□□□ -0.4
ARPC3-208ENST00000548878 PBX2P40425 430 aa12.52□□□□□ -0.41
ARPC3-208ENST00000548878 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
ARPC3-208ENST00000548878 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
ARPC3-208ENST00000548878 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
ARPC3-208ENST00000548878 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
ARPC3-208ENST00000548878 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
ARPC3-208ENST00000548878 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
ARPC3-208ENST00000548878 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
ARPC3-208ENST00000548878 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
ARPC3-208ENST00000548878 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
ARPC3-208ENST00000548878 KDM4FA0A1W2PPD8 638 aa12.45□□□□□ -0.42
ARPC3-208ENST00000548878 TBC1D12O60347 775 aa12.44□□□□□ -0.42
ARPC3-208ENST00000548878 DSG2Q14126 1118 aa12.44□□□□□ -0.42
ARPC3-208ENST00000548878 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
ARPC3-208ENST00000548878 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
ARPC3-208ENST00000548878 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
ARPC3-208ENST00000548878 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
ARPC3-208ENST00000548878 PDE4AP27815 886 aa12.34□□□□□ -0.43
ARPC3-208ENST00000548878 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
ARPC3-208ENST00000548878 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
ARPC3-208ENST00000548878 PPP4R3BQ5MIZ7 849 aa12.33□□□□□ -0.44
ARPC3-208ENST00000548878 PPP1R15BQ5SWA1 713 aa12.31□□□□□ -0.44
ARPC3-208ENST00000548878 TK2O00142 265 aa12.3□□□□□ -0.44
ARPC3-208ENST00000548878 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
ARPC3-208ENST00000548878 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
ARPC3-208ENST00000548878 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
ARPC3-208ENST00000548878 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
ARPC3-208ENST00000548878 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
ARPC3-208ENST00000548878 PSEN2P49810 448 aa12.22□□□□□ -0.45
ARPC3-208ENST00000548878 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
ARPC3-208ENST00000548878 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
ARPC3-208ENST00000548878 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
ARPC3-208ENST00000548878 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
ARPC3-208ENST00000548878 HRO43593 1189 aa12.2□□□□□ -0.46
ARPC3-208ENST00000548878 MFSD10Q14728 455 aa12.2□□□□□ -0.46
ARPC3-208ENST00000548878 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
ARPC3-208ENST00000548878 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
ARPC3-208ENST00000548878 FOSBP53539 338 aa12.17□□□□□ -0.46
ARPC3-208ENST00000548878 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
ARPC3-208ENST00000548878 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
ARPC3-208ENST00000548878 EVI5O60447 810 aa12.14□□□□□ -0.47
ARPC3-208ENST00000548878 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
ARPC3-208ENST00000548878 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
ARPC3-208ENST00000548878 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
ARPC3-208ENST00000548878 MAP3K9P80192 1104 aa12.12□□□□□ -0.47
ARPC3-208ENST00000548878 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
ARPC3-208ENST00000548878 PTPREP23469 700 aa12.1□□□□□ -0.47
ARPC3-208ENST00000548878 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
ARPC3-208ENST00000548878 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
ARPC3-208ENST00000548878 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
ARPC3-208ENST00000548878 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
ARPC3-208ENST00000548878 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
ARPC3-208ENST00000548878 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
ARPC3-208ENST00000548878 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
ARPC3-208ENST00000548878 ADAM33Q9BZ11 813 aa12.03□□□□□ -0.48
ARPC3-208ENST00000548878 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
ARPC3-208ENST00000548878 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
ARPC3-208ENST00000548878 FBXW7Q969H0 707 aa12□□□□□ -0.49
ARPC3-208ENST00000548878 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
ARPC3-208ENST00000548878 PHF14O94880 888 aa11.98□□□□□ -0.49
ARPC3-208ENST00000548878 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
ARPC3-208ENST00000548878 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
ARPC3-208ENST00000548878 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
ARPC3-208ENST00000548878 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
ARPC3-208ENST00000548878 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
ARPC3-208ENST00000548878 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
ARPC3-208ENST00000548878 EPAS1Q99814 870 aa11.93□□□□□ -0.5
ARPC3-208ENST00000548878 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
ARPC3-208ENST00000548878 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
ARPC3-208ENST00000548878 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms