RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
BEST3-209ENST00000548658 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
BEST3-209ENST00000548658 ARID4BQ4LE39 1312 aaPredicted RBP18.28■□□□□ 0.52
BEST3-209ENST00000548658 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
BEST3-209ENST00000548658 ADRA2BP18089 450 aa18.28■□□□□ 0.52
BEST3-209ENST00000548658 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
BEST3-209ENST00000548658 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
BEST3-209ENST00000548658 POGZQ7Z3K3 1410 aa18.24■□□□□ 0.51
BEST3-209ENST00000548658 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
BEST3-209ENST00000548658 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
BEST3-209ENST00000548658 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
BEST3-209ENST00000548658 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
BEST3-209ENST00000548658 ADAMTSL3P82987 1691 aa18.18■□□□□ 0.5
BEST3-209ENST00000548658 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
BEST3-209ENST00000548658 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
BEST3-209ENST00000548658 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
BEST3-209ENST00000548658 BCORL1Q5H9F3 1711 aa18.17■□□□□ 0.5
BEST3-209ENST00000548658 CDC42BPBQ9Y5S2 1711 aa18.17■□□□□ 0.5
BEST3-209ENST00000548658 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
BEST3-209ENST00000548658 ATP10AO60312 1499 aa18.16■□□□□ 0.5
BEST3-209ENST00000548658 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
BEST3-209ENST00000548658 PTPRMP28827 1452 aa18.15■□□□□ 0.5
BEST3-209ENST00000548658 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
BEST3-209ENST00000548658 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
BEST3-209ENST00000548658 KDM5CP41229 1560 aa18.13■□□□□ 0.49
BEST3-209ENST00000548658 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
BEST3-209ENST00000548658 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
BEST3-209ENST00000548658 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
BEST3-209ENST00000548658 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
BEST3-209ENST00000548658 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
BEST3-209ENST00000548658 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
BEST3-209ENST00000548658 ABCC1P33527 1531 aa18.1■□□□□ 0.49
BEST3-209ENST00000548658 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
BEST3-209ENST00000548658 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.49
BEST3-209ENST00000548658 PLEKHH2Q8IVE3 1493 aa18.08■□□□□ 0.49
BEST3-209ENST00000548658 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
BEST3-209ENST00000548658 MLECQ14165 292 aa18.08■□□□□ 0.48
BEST3-209ENST00000548658 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
BEST3-209ENST00000548658 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
BEST3-209ENST00000548658 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
BEST3-209ENST00000548658 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
BEST3-209ENST00000548658 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
BEST3-209ENST00000548658 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
BEST3-209ENST00000548658 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
BEST3-209ENST00000548658 REREQ9P2R6 1566 aa18.03■□□□□ 0.48
BEST3-209ENST00000548658 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
BEST3-209ENST00000548658 SPAG9O60271 1321 aaKnown RBP18.02■□□□□ 0.48
BEST3-209ENST00000548658 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
BEST3-209ENST00000548658 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
BEST3-209ENST00000548658 SYCP2Q9BX26 1530 aa18■□□□□ 0.47
BEST3-209ENST00000548658 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
BEST3-209ENST00000548658 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
BEST3-209ENST00000548658 AGLP35573 1532 aa17.98■□□□□ 0.47
BEST3-209ENST00000548658 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
BEST3-209ENST00000548658 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
BEST3-209ENST00000548658 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
BEST3-209ENST00000548658 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
BEST3-209ENST00000548658 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
BEST3-209ENST00000548658 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
BEST3-209ENST00000548658 NCOA2Q15596 1464 aa17.96■□□□□ 0.47
BEST3-209ENST00000548658 MAP3K1Q13233 1512 aa17.96■□□□□ 0.47
BEST3-209ENST00000548658 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
BEST3-209ENST00000548658 APLP2Q06481 763 aa17.94■□□□□ 0.46
BEST3-209ENST00000548658 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
BEST3-209ENST00000548658 LMTK3Q96Q04 1460 aa17.93■□□□□ 0.46
BEST3-209ENST00000548658 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
BEST3-209ENST00000548658 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
BEST3-209ENST00000548658 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
BEST3-209ENST00000548658 CNTLNQ9NXG0 1405 aa17.9■□□□□ 0.46
BEST3-209ENST00000548658 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
BEST3-209ENST00000548658 INO80Q9ULG1 1556 aaPredicted RBP17.89■□□□□ 0.45
BEST3-209ENST00000548658 A2MP01023 1474 aa17.88■□□□□ 0.45
BEST3-209ENST00000548658 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
BEST3-209ENST00000548658 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
BEST3-209ENST00000548658 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
BEST3-209ENST00000548658 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
BEST3-209ENST00000548658 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
BEST3-209ENST00000548658 CCDC141Q6ZP82 1450 aa17.86■□□□□ 0.45
BEST3-209ENST00000548658 HSPA2P54652 639 aa17.85■□□□□ 0.45
BEST3-209ENST00000548658 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.45
BEST3-209ENST00000548658 PLXNC1O60486 1568 aa17.83■□□□□ 0.45
BEST3-209ENST00000548658 MIA2Q96PC5 1412 aa17.83■□□□□ 0.45
BEST3-209ENST00000548658 GGT6Q6P531 493 aa17.83■□□□□ 0.44
BEST3-209ENST00000548658 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
BEST3-209ENST00000548658 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
BEST3-209ENST00000548658 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
BEST3-209ENST00000548658 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
BEST3-209ENST00000548658 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
BEST3-209ENST00000548658 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
BEST3-209ENST00000548658 C3P01024 1663 aa17.8■□□□□ 0.44
BEST3-209ENST00000548658 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
BEST3-209ENST00000548658 NPATQ14207 1427 aa17.78■□□□□ 0.44
BEST3-209ENST00000548658 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
BEST3-209ENST00000548658 KIF3BO15066 747 aa17.76■□□□□ 0.43
BEST3-209ENST00000548658 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
BEST3-209ENST00000548658 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
BEST3-209ENST00000548658 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.42
BEST3-209ENST00000548658 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
BEST3-209ENST00000548658 FAM135AQ9P2D6 1515 aa17.7■□□□□ 0.42
BEST3-209ENST00000548658 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms