RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
APP-217ENST00000548570 ABCA8O94911 1581 aa8.03□□□□□ -1.12
APP-217ENST00000548570 NUP153P49790 1475 aaKnown RBP8.03□□□□□ -1.12
APP-217ENST00000548570 UHRF1BP1LA0JNW5 1464 aa8.02□□□□□ -1.13
APP-217ENST00000548570 CLCN6P51797 869 aa8.02□□□□□ -1.13
APP-217ENST00000548570 LHX8Q68G74 356 aa8.02□□□□□ -1.13
APP-217ENST00000548570 CHADLQ6NUI6 762 aa8.02□□□□□ -1.13
APP-217ENST00000548570 CASKIN1Q8WXD9 1431 aa8.02□□□□□ -1.13
APP-217ENST00000548570 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
APP-217ENST00000548570 VPS8Q8N3P4 1428 aa8.01□□□□□ -1.13
APP-217ENST00000548570 ATP10BO94823 1461 aa8□□□□□ -1.13
APP-217ENST00000548570 ABCC2Q92887 1545 aa8□□□□□ -1.13
APP-217ENST00000548570 ARID3CA6NKF2 412 aa8□□□□□ -1.13
APP-217ENST00000548570 ADCY10Q96PN6 1610 aa8□□□□□ -1.13
APP-217ENST00000548570 KDM5BQ9UGL1 1544 aa7.99□□□□□ -1.13
APP-217ENST00000548570 PCF11O94913 1555 aaKnown RBP7.98□□□□□ -1.13
APP-217ENST00000548570 CD44P16070 742 aaKnown RBP7.97□□□□□ -1.13
APP-217ENST00000548570 EPRSP07814 1512 aaKnown RBP7.97□□□□□ -1.13
APP-217ENST00000548570 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.13
APP-217ENST00000548570 FYCO1Q9BQS8 1478 aa7.96□□□□□ -1.13
APP-217ENST00000548570 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
APP-217ENST00000548570 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
APP-217ENST00000548570 MAGI3Q5TCQ9 1506 aa7.95□□□□□ -1.14
APP-217ENST00000548570 ATP1B4Q9UN42 357 aaPredicted RBP7.94□□□□□ -1.14
APP-217ENST00000548570 FARP1Q9Y4F1 1045 aaPredicted RBP7.94□□□□□ -1.14
APP-217ENST00000548570 ASXL2Q76L83 1435 aa7.94□□□□□ -1.14
APP-217ENST00000548570 MAPKBP1O60336 1514 aa7.91□□□□□ -1.14
APP-217ENST00000548570 ZCCHC11Q5TAX3 1644 aaKnown RBP7.91□□□□□ -1.14
APP-217ENST00000548570 HECW1Q76N89 1606 aa7.91□□□□□ -1.14
APP-217ENST00000548570 LRRIQ1Q96JM4 1722 aa7.91□□□□□ -1.14
APP-217ENST00000548570 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
APP-217ENST00000548570 CCDC18Q5T9S5 1454 aa7.9□□□□□ -1.14
APP-217ENST00000548570 DCBLD2Q96PD2 775 aa7.9□□□□□ -1.14
APP-217ENST00000548570 TIAM1Q13009 1591 aa7.89□□□□□ -1.15
APP-217ENST00000548570 LRRC9Q6ZRR7 1453 aa7.89□□□□□ -1.15
APP-217ENST00000548570 WDR7Q9Y4E6 1490 aa7.89□□□□□ -1.15
APP-217ENST00000548570 TROQ12816 1431 aaPredicted RBP7.89□□□□□ -1.15
APP-217ENST00000548570 NPM1P06748 294 aaKnown RBP eCLIP7.89□□□□□ -1.15
APP-217ENST00000548570 PPARGC1BQ86YN6 1023 aaKnown RBP7.89□□□□□ -1.15
APP-217ENST00000548570 PLEKHD1A6NEE1 506 aa7.88□□□□□ -1.15
APP-217ENST00000548570 STAG3Q9UJ98 1225 aa7.88□□□□□ -1.15
APP-217ENST00000548570 ABCC10Q5T3U5 1492 aa7.87□□□□□ -1.15
APP-217ENST00000548570 KCNH8Q96L42 1107 aa7.87□□□□□ -1.15
APP-217ENST00000548570 FAM69CQ0P6D2 419 aa7.85□□□□□ -1.15
APP-217ENST00000548570 CDK11AQ9UQ88 783 aaPredicted RBP7.85□□□□□ -1.15
APP-217ENST00000548570 KIF14Q15058 1648 aa7.85□□□□□ -1.15
APP-217ENST00000548570 MTUS2Q5JR59 1369 aa7.84□□□□□ -1.15
APP-217ENST00000548570 PHLDB1Q86UU1 1377 aa7.84□□□□□ -1.15
APP-217ENST00000548570 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
APP-217ENST00000548570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.84□□□□□ -1.15
APP-217ENST00000548570 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
APP-217ENST00000548570 NCOA2Q15596 1464 aa7.84□□□□□ -1.15
APP-217ENST00000548570 EHBP1L1Q8N3D4 1523 aa7.83□□□□□ -1.16
APP-217ENST00000548570 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
APP-217ENST00000548570 PAK3O75914 559 aaPredicted RBP7.83□□□□□ -1.16
APP-217ENST00000548570 GLI2P10070 1586 aa7.83□□□□□ -1.16
APP-217ENST00000548570 PLCH2O75038 1416 aa7.82□□□□□ -1.16
APP-217ENST00000548570 TTC37Q6PGP7 1564 aa7.82□□□□□ -1.16
APP-217ENST00000548570 ZRANB1Q9UGI0 708 aa7.82□□□□□ -1.16
APP-217ENST00000548570 CD109Q6YHK3 1445 aa7.81□□□□□ -1.16
APP-217ENST00000548570 ZNF579Q8NAF0 562 aaKnown RBP7.81□□□□□ -1.16
APP-217ENST00000548570 ZNF644Q9H582 1327 aaPredicted RBP7.8□□□□□ -1.16
APP-217ENST00000548570 ABCA9Q8IUA7 1624 aa7.8□□□□□ -1.16
APP-217ENST00000548570 COL17A1Q9UMD9 1497 aaPredicted RBP7.8□□□□□ -1.16
APP-217ENST00000548570 POTEIP0CG38 1075 aa7.79□□□□□ -1.16
APP-217ENST00000548570 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
APP-217ENST00000548570 MYOM3Q5VTT5 1437 aa7.78□□□□□ -1.16
APP-217ENST00000548570 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
APP-217ENST00000548570 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
APP-217ENST00000548570 PPRC1Q5VV67 1664 aaKnown RBP7.76□□□□□ -1.17
APP-217ENST00000548570 MBD5Q9P267 1494 aa7.76□□□□□ -1.17
APP-217ENST00000548570 CFDP1Q9UEE9 299 aaPredicted RBP7.76□□□□□ -1.17
APP-217ENST00000548570 ARAP3Q8WWN8 1544 aa7.76□□□□□ -1.17
APP-217ENST00000548570 FGD6Q6ZV73 1430 aa7.76□□□□□ -1.17
APP-217ENST00000548570 MIA2Q96PC5 1412 aa7.76□□□□□ -1.17
APP-217ENST00000548570 FANCAO15360 1455 aa7.75□□□□□ -1.17
APP-217ENST00000548570 EFCAB2Q5VUJ9 269 aa7.75□□□□□ -1.17
APP-217ENST00000548570 AKNAQ7Z591 1439 aa7.75□□□□□ -1.17
APP-217ENST00000548570 RRBP1Q9P2E9 1410 aaKnown RBP7.75□□□□□ -1.17
APP-217ENST00000548570 KIF13AQ9H1H9 1805 aa7.75□□□□□ -1.17
APP-217ENST00000548570 TCOF1Q13428 1488 aaKnown RBP7.75□□□□□ -1.17
APP-217ENST00000548570 CREBZFQ9NS37 354 aa7.74□□□□□ -1.17
APP-217ENST00000548570 ZNF777Q9ULD5 760 aaPredicted RBP7.74□□□□□ -1.17
APP-217ENST00000548570 PTPRKQ15262 1439 aa7.74□□□□□ -1.17
APP-217ENST00000548570 TRAPPC8Q9Y2L5 1435 aa7.74□□□□□ -1.17
APP-217ENST00000548570 SUPT6HQ7KZ85 1726 aaKnown RBP7.74□□□□□ -1.17
APP-217ENST00000548570 NEO1Q92859 1461 aa7.74□□□□□ -1.17
APP-217ENST00000548570 ARHGAP5Q13017 1502 aa7.73□□□□□ -1.17
APP-217ENST00000548570 SAMD9LQ8IVG5 1584 aa7.73□□□□□ -1.17
APP-217ENST00000548570 SCAPERQ9BY12 1400 aa7.73□□□□□ -1.17
APP-217ENST00000548570 KIAA1107Q9UPP5 1409 aa7.73□□□□□ -1.17
APP-217ENST00000548570 RAPGEF3O95398 923 aa7.73□□□□□ -1.17
APP-217ENST00000548570 HNRNPMP52272 730 aaKnown RBP eCLIP7.73□□□□□ -1.17
APP-217ENST00000548570 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
APP-217ENST00000548570 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
APP-217ENST00000548570 PREX2Q70Z35 1606 aa7.73□□□□□ -1.17
APP-217ENST00000548570 CAMSAP2Q08AD1 1489 aa7.72□□□□□ -1.17
APP-217ENST00000548570 ABCC1P33527 1531 aa7.72□□□□□ -1.17
APP-217ENST00000548570 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
APP-217ENST00000548570 CDC42BPBQ9Y5S2 1711 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms