RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 MYO5CQ9NQX4 1742 aa13.87□□□□□ -0.19
SP1-203ENST00000548560 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
SP1-203ENST00000548560 TTC37Q6PGP7 1564 aa13.87□□□□□ -0.19
SP1-203ENST00000548560 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
SP1-203ENST00000548560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.19
SP1-203ENST00000548560 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
SP1-203ENST00000548560 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
SP1-203ENST00000548560 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
SP1-203ENST00000548560 NEO1Q92859 1461 aa13.8□□□□□ -0.2
SP1-203ENST00000548560 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
SP1-203ENST00000548560 MTUS2Q5JR59 1369 aa13.78□□□□□ -0.2
SP1-203ENST00000548560 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
SP1-203ENST00000548560 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
SP1-203ENST00000548560 PREX2Q70Z35 1606 aa13.78□□□□□ -0.2
SP1-203ENST00000548560 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
SP1-203ENST00000548560 FANCAO15360 1455 aa13.77□□□□□ -0.21
SP1-203ENST00000548560 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
SP1-203ENST00000548560 ARAP3Q8WWN8 1544 aa13.77□□□□□ -0.21
SP1-203ENST00000548560 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
SP1-203ENST00000548560 ARHGAP5Q13017 1502 aa13.75□□□□□ -0.21
SP1-203ENST00000548560 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
SP1-203ENST00000548560 SUPT6HQ7KZ85 1726 aaKnown RBP13.75□□□□□ -0.21
SP1-203ENST00000548560 ITSN2Q9NZM3 1697 aa13.75□□□□□ -0.21
SP1-203ENST00000548560 PLCH2O75038 1416 aa13.74□□□□□ -0.21
SP1-203ENST00000548560 RICTORQ6R327 1708 aa13.73□□□□□ -0.21
SP1-203ENST00000548560 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
SP1-203ENST00000548560 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
SP1-203ENST00000548560 APLP2Q06481 763 aa13.71□□□□□ -0.21
SP1-203ENST00000548560 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
SP1-203ENST00000548560 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
SP1-203ENST00000548560 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
SP1-203ENST00000548560 CCNB3Q8WWL7 1395 aa13.68□□□□□ -0.22
SP1-203ENST00000548560 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
SP1-203ENST00000548560 ABCC1P33527 1531 aa13.66□□□□□ -0.22
SP1-203ENST00000548560 SCAPERQ9BY12 1400 aa13.65□□□□□ -0.22
SP1-203ENST00000548560 GPATCH8Q9UKJ3 1502 aaKnown RBP13.65□□□□□ -0.22
SP1-203ENST00000548560 NCOA2Q15596 1464 aa13.65□□□□□ -0.22
SP1-203ENST00000548560 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
SP1-203ENST00000548560 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
SP1-203ENST00000548560 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
SP1-203ENST00000548560 SAMD9LQ8IVG5 1584 aa13.64□□□□□ -0.23
SP1-203ENST00000548560 RAPGEF3O95398 923 aa13.64□□□□□ -0.23
SP1-203ENST00000548560 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
SP1-203ENST00000548560 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
SP1-203ENST00000548560 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
SP1-203ENST00000548560 ZFYVE16Q7Z3T8 1539 aa13.61□□□□□ -0.23
SP1-203ENST00000548560 SYCP2Q9BX26 1530 aa13.61□□□□□ -0.23
SP1-203ENST00000548560 CFDP1Q9UEE9 299 aaPredicted RBP13.61□□□□□ -0.23
SP1-203ENST00000548560 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
SP1-203ENST00000548560 KDM5CP41229 1560 aa13.61□□□□□ -0.23
SP1-203ENST00000548560 MAGI2Q86UL8 1455 aa13.6□□□□□ -0.23
SP1-203ENST00000548560 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
SP1-203ENST00000548560 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
SP1-203ENST00000548560 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
SP1-203ENST00000548560 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
SP1-203ENST00000548560 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
SP1-203ENST00000548560 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
SP1-203ENST00000548560 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
SP1-203ENST00000548560 MYOM3Q5VTT5 1437 aa13.55□□□□□ -0.24
SP1-203ENST00000548560 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
SP1-203ENST00000548560 BCORL1Q5H9F3 1711 aa13.54□□□□□ -0.24
SP1-203ENST00000548560 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
SP1-203ENST00000548560 KIDINS220Q9ULH0 1771 aa13.54□□□□□ -0.24
SP1-203ENST00000548560 YEATS2Q9ULM3 1422 aa13.54□□□□□ -0.24
SP1-203ENST00000548560 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
SP1-203ENST00000548560 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SP1-203ENST00000548560 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
SP1-203ENST00000548560 MLH3Q9UHC1 1453 aa13.53□□□□□ -0.24
SP1-203ENST00000548560 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
SP1-203ENST00000548560 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
SP1-203ENST00000548560 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
SP1-203ENST00000548560 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
SP1-203ENST00000548560 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
SP1-203ENST00000548560 INO80Q9ULG1 1556 aaPredicted RBP13.52□□□□□ -0.25
SP1-203ENST00000548560 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
SP1-203ENST00000548560 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
SP1-203ENST00000548560 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
SP1-203ENST00000548560 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
SP1-203ENST00000548560 ATP10AO60312 1499 aa13.5□□□□□ -0.25
SP1-203ENST00000548560 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
SP1-203ENST00000548560 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
SP1-203ENST00000548560 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
SP1-203ENST00000548560 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
SP1-203ENST00000548560 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
SP1-203ENST00000548560 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
SP1-203ENST00000548560 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
SP1-203ENST00000548560 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
SP1-203ENST00000548560 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
SP1-203ENST00000548560 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
SP1-203ENST00000548560 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
SP1-203ENST00000548560 PTPRMP28827 1452 aa13.47□□□□□ -0.25
SP1-203ENST00000548560 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
SP1-203ENST00000548560 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
SP1-203ENST00000548560 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
SP1-203ENST00000548560 DNMT1P26358 1616 aaKnown RBP13.44□□□□□ -0.26
SP1-203ENST00000548560 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
SP1-203ENST00000548560 MAST1Q9Y2H9 1570 aa13.44□□□□□ -0.26
SP1-203ENST00000548560 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
SP1-203ENST00000548560 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
SP1-203ENST00000548560 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms