RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 CDC42BPBQ9Y5S2 1711 aa25.2■■□□□ 1.62
SNX29P1-201ENST00000548357 ILDR1Q86SU0 546 aaPredicted RBP25.19■■□□□ 1.62
SNX29P1-201ENST00000548357 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
SNX29P1-201ENST00000548357 POGZQ7Z3K3 1410 aa25.17■■□□□ 1.62
SNX29P1-201ENST00000548357 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
SNX29P1-201ENST00000548357 SCAPERQ9BY12 1400 aa25.15■■□□□ 1.62
SNX29P1-201ENST00000548357 TROQ12816 1431 aaPredicted RBP25.14■■□□□ 1.62
SNX29P1-201ENST00000548357 LMTK3Q96Q04 1460 aa25.09■■□□□ 1.61
SNX29P1-201ENST00000548357 PREX2Q70Z35 1606 aa25.09■■□□□ 1.61
SNX29P1-201ENST00000548357 ARHGAP5Q13017 1502 aa25.09■■□□□ 1.61
SNX29P1-201ENST00000548357 CDC42BPAQ5VT25 1732 aa25.09■■□□□ 1.61
SNX29P1-201ENST00000548357 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
SNX29P1-201ENST00000548357 KDM5CP41229 1560 aa25.06■■□□□ 1.6
SNX29P1-201ENST00000548357 CASKIN1Q8WXD9 1431 aa25.06■■□□□ 1.6
SNX29P1-201ENST00000548357 ITSN2Q9NZM3 1697 aa25.05■■□□□ 1.6
SNX29P1-201ENST00000548357 ABCA6Q8N139 1617 aa25.02■■□□□ 1.6
SNX29P1-201ENST00000548357 CLIP1P30622 1438 aa25.02■■□□□ 1.6
SNX29P1-201ENST00000548357 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
SNX29P1-201ENST00000548357 EFCAB2Q5VUJ9 269 aa25.01■■□□□ 1.59
SNX29P1-201ENST00000548357 ATP10AO60312 1499 aa25.01■■□□□ 1.59
SNX29P1-201ENST00000548357 CCDC18Q5T9S5 1454 aa25.01■■□□□ 1.59
SNX29P1-201ENST00000548357 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
SNX29P1-201ENST00000548357 MLECQ14165 292 aa25■■□□□ 1.59
SNX29P1-201ENST00000548357 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
SNX29P1-201ENST00000548357 CDK11AQ9UQ88 783 aaPredicted RBP25■■□□□ 1.59
SNX29P1-201ENST00000548357 ABCC1P33527 1531 aa25■■□□□ 1.59
SNX29P1-201ENST00000548357 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
SNX29P1-201ENST00000548357 ZNF518AQ6AHZ1 1483 aa24.98■■□□□ 1.59
SNX29P1-201ENST00000548357 FYCO1Q9BQS8 1478 aa24.97■■□□□ 1.59
SNX29P1-201ENST00000548357 AFAP1Q8N556 730 aa24.96■■□□□ 1.59
SNX29P1-201ENST00000548357 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
SNX29P1-201ENST00000548357 TRAPPC8Q9Y2L5 1435 aa24.94■■□□□ 1.58
SNX29P1-201ENST00000548357 SAMD9LQ8IVG5 1584 aa24.92■■□□□ 1.58
SNX29P1-201ENST00000548357 HSPA2P54652 639 aa24.91■■□□□ 1.58
SNX29P1-201ENST00000548357 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
SNX29P1-201ENST00000548357 PREX1Q8TCU6 1659 aa24.89■■□□□ 1.58
SNX29P1-201ENST00000548357 C3P01024 1663 aa24.86■■□□□ 1.57
SNX29P1-201ENST00000548357 MLH3Q9UHC1 1453 aa24.86■■□□□ 1.57
SNX29P1-201ENST00000548357 SYCP2Q9BX26 1530 aa24.84■■□□□ 1.57
SNX29P1-201ENST00000548357 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
SNX29P1-201ENST00000548357 GPATCH8Q9UKJ3 1502 aaKnown RBP24.82■■□□□ 1.56
SNX29P1-201ENST00000548357 STRCQ7RTU9 1775 aa24.8■■□□□ 1.56
SNX29P1-201ENST00000548357 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
SNX29P1-201ENST00000548357 AGLP35573 1532 aa24.78■■□□□ 1.56
SNX29P1-201ENST00000548357 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
SNX29P1-201ENST00000548357 SETD1BQ9UPS6 1966 aaKnown RBP24.77■■□□□ 1.56
SNX29P1-201ENST00000548357 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
SNX29P1-201ENST00000548357 INO80Q9ULG1 1556 aaPredicted RBP24.75■■□□□ 1.55
SNX29P1-201ENST00000548357 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
SNX29P1-201ENST00000548357 FBXO41Q8TF61 875 aa24.71■■□□□ 1.55
SNX29P1-201ENST00000548357 ATP7AQ04656 1500 aa24.7■■□□□ 1.54
SNX29P1-201ENST00000548357 HNRNPMP52272 730 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNX29P1-201ENST00000548357 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
SNX29P1-201ENST00000548357 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
SNX29P1-201ENST00000548357 PLXNC1O60486 1568 aa24.67■■□□□ 1.54
SNX29P1-201ENST00000548357 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
SNX29P1-201ENST00000548357 CLTCQ00610 1675 aaKnown RBP24.66■■□□□ 1.54
SNX29P1-201ENST00000548357 MTUS2Q5JR59 1369 aa24.65■■□□□ 1.54
SNX29P1-201ENST00000548357 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
SNX29P1-201ENST00000548357 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
SNX29P1-201ENST00000548357 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
SNX29P1-201ENST00000548357 KIAA1107Q9UPP5 1409 aa24.62■■□□□ 1.53
SNX29P1-201ENST00000548357 SPAG9O60271 1321 aaKnown RBP24.61■■□□□ 1.53
SNX29P1-201ENST00000548357 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
SNX29P1-201ENST00000548357 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
SNX29P1-201ENST00000548357 PLEKHH2Q8IVE3 1493 aa24.6■■□□□ 1.53
SNX29P1-201ENST00000548357 MBD5Q9P267 1494 aa24.58■■□□□ 1.52
SNX29P1-201ENST00000548357 A2MP01023 1474 aa24.57■■□□□ 1.52
SNX29P1-201ENST00000548357 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
SNX29P1-201ENST00000548357 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
SNX29P1-201ENST00000548357 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
SNX29P1-201ENST00000548357 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
SNX29P1-201ENST00000548357 CERKQ8TCT0 537 aa24.51■■□□□ 1.51
SNX29P1-201ENST00000548357 ESF1Q9H501 851 aaKnown RBP24.5■■□□□ 1.51
SNX29P1-201ENST00000548357 CAMSAP2Q08AD1 1489 aa24.49■■□□□ 1.51
SNX29P1-201ENST00000548357 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
SNX29P1-201ENST00000548357 CAMSAP1Q5T5Y3 1602 aa24.47■■□□□ 1.51
SNX29P1-201ENST00000548357 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
SNX29P1-201ENST00000548357 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
SNX29P1-201ENST00000548357 NPATQ14207 1427 aa24.45■■□□□ 1.51
SNX29P1-201ENST00000548357 PTPRTO14522 1441 aa24.43■■□□□ 1.5
SNX29P1-201ENST00000548357 PTPRKQ15262 1439 aa24.43■■□□□ 1.5
SNX29P1-201ENST00000548357 LTBP4Q8N2S1 1624 aa24.43■■□□□ 1.5
SNX29P1-201ENST00000548357 CCDC141Q6ZP82 1450 aa24.42■■□□□ 1.5
SNX29P1-201ENST00000548357 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
SNX29P1-201ENST00000548357 GGT6Q6P531 493 aa24.41■■□□□ 1.5
SNX29P1-201ENST00000548357 RTEL1-TNFRSF6BF6WH68 1400 aa24.41■■□□□ 1.5
SNX29P1-201ENST00000548357 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
SNX29P1-201ENST00000548357 ARHGEF5Q12774 1597 aa24.39■■□□□ 1.5
SNX29P1-201ENST00000548357 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
SNX29P1-201ENST00000548357 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
SNX29P1-201ENST00000548357 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
SNX29P1-201ENST00000548357 DNMT1P26358 1616 aaKnown RBP24.32■■□□□ 1.48
SNX29P1-201ENST00000548357 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
SNX29P1-201ENST00000548357 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
SNX29P1-201ENST00000548357 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
SNX29P1-201ENST00000548357 POLR1AO95602 1720 aaPredicted RBP24.3■■□□□ 1.48
SNX29P1-201ENST00000548357 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
SNX29P1-201ENST00000548357 TCOF1Q13428 1488 aaKnown RBP24.29■■□□□ 1.48
SNX29P1-201ENST00000548357 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms