RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 CDC42BPBQ9Y5S2 1711 aa24.19■■□□□ 1.46
RNF41-205ENST00000548225 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
RNF41-205ENST00000548225 EHBP1L1Q8N3D4 1523 aa24.19■■□□□ 1.46
RNF41-205ENST00000548225 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
RNF41-205ENST00000548225 CDC42BPAQ5VT25 1732 aa24.17■■□□□ 1.46
RNF41-205ENST00000548225 SCAPERQ9BY12 1400 aa24.17■■□□□ 1.46
RNF41-205ENST00000548225 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
RNF41-205ENST00000548225 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
RNF41-205ENST00000548225 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
RNF41-205ENST00000548225 ARHGEF40Q8TER5 1519 aa24.13■■□□□ 1.45
RNF41-205ENST00000548225 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
RNF41-205ENST00000548225 GPATCH8Q9UKJ3 1502 aaKnown RBP24.1■■□□□ 1.45
RNF41-205ENST00000548225 ZNF518AQ6AHZ1 1483 aa24.1■■□□□ 1.45
RNF41-205ENST00000548225 ABCC1P33527 1531 aa24.1■■□□□ 1.45
RNF41-205ENST00000548225 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
RNF41-205ENST00000548225 CCNB3Q8WWL7 1395 aa24.08■■□□□ 1.45
RNF41-205ENST00000548225 ZFYVE16Q7Z3T8 1539 aa24.08■■□□□ 1.45
RNF41-205ENST00000548225 KDM5CP41229 1560 aa24.06■■□□□ 1.44
RNF41-205ENST00000548225 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
RNF41-205ENST00000548225 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
RNF41-205ENST00000548225 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
RNF41-205ENST00000548225 LRRC9Q6ZRR7 1453 aa24.01■■□□□ 1.43
RNF41-205ENST00000548225 PLEKHH2Q8IVE3 1493 aa24.01■■□□□ 1.43
RNF41-205ENST00000548225 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
RNF41-205ENST00000548225 CFDP1Q9UEE9 299 aaPredicted RBP24■■□□□ 1.43
RNF41-205ENST00000548225 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
RNF41-205ENST00000548225 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
RNF41-205ENST00000548225 NCOA2Q15596 1464 aa23.99■■□□□ 1.43
RNF41-205ENST00000548225 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
RNF41-205ENST00000548225 AFAP1Q8N556 730 aa23.97■■□□□ 1.43
RNF41-205ENST00000548225 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
RNF41-205ENST00000548225 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
RNF41-205ENST00000548225 TRAPPC8Q9Y2L5 1435 aa23.96■■□□□ 1.43
RNF41-205ENST00000548225 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
RNF41-205ENST00000548225 BCORL1Q5H9F3 1711 aa23.95■■□□□ 1.42
RNF41-205ENST00000548225 ATP10AO60312 1499 aa23.94■■□□□ 1.42
RNF41-205ENST00000548225 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
RNF41-205ENST00000548225 ADAMTSL3P82987 1691 aa23.93■■□□□ 1.42
RNF41-205ENST00000548225 ARID4BQ4LE39 1312 aaPredicted RBP23.92■■□□□ 1.42
RNF41-205ENST00000548225 APLP2Q06481 763 aa23.92■■□□□ 1.42
RNF41-205ENST00000548225 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
RNF41-205ENST00000548225 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
RNF41-205ENST00000548225 SIGLEC1Q9BZZ2 1709 aa23.89■■□□□ 1.41
RNF41-205ENST00000548225 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
RNF41-205ENST00000548225 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
RNF41-205ENST00000548225 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
RNF41-205ENST00000548225 KIDINS220Q9ULH0 1771 aa23.87■■□□□ 1.41
RNF41-205ENST00000548225 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
RNF41-205ENST00000548225 CAMSAP2Q08AD1 1489 aa23.84■■□□□ 1.41
RNF41-205ENST00000548225 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
RNF41-205ENST00000548225 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
RNF41-205ENST00000548225 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
RNF41-205ENST00000548225 INO80Q9ULG1 1556 aaPredicted RBP23.83■■□□□ 1.41
RNF41-205ENST00000548225 ZNF644Q9H582 1327 aaPredicted RBP23.83■■□□□ 1.4
RNF41-205ENST00000548225 ATP7AQ04656 1500 aa23.82■■□□□ 1.4
RNF41-205ENST00000548225 AGLP35573 1532 aa23.8■■□□□ 1.4
RNF41-205ENST00000548225 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
RNF41-205ENST00000548225 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
RNF41-205ENST00000548225 PTPRMP28827 1452 aa23.8■■□□□ 1.4
RNF41-205ENST00000548225 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
RNF41-205ENST00000548225 CCDC141Q6ZP82 1450 aa23.78■■□□□ 1.4
RNF41-205ENST00000548225 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
RNF41-205ENST00000548225 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
RNF41-205ENST00000548225 RTEL1-TNFRSF6BF6WH68 1400 aa23.76■■□□□ 1.39
RNF41-205ENST00000548225 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
RNF41-205ENST00000548225 ADGBQ8N7X0 1667 aa23.73■■□□□ 1.39
RNF41-205ENST00000548225 MLECQ14165 292 aa23.72■■□□□ 1.39
RNF41-205ENST00000548225 PLXNC1O60486 1568 aa23.72■■□□□ 1.39
RNF41-205ENST00000548225 A2MP01023 1474 aa23.7■■□□□ 1.38
RNF41-205ENST00000548225 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
RNF41-205ENST00000548225 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
RNF41-205ENST00000548225 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
RNF41-205ENST00000548225 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
RNF41-205ENST00000548225 FGD6Q6ZV73 1430 aa23.64■■□□□ 1.37
RNF41-205ENST00000548225 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
RNF41-205ENST00000548225 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
RNF41-205ENST00000548225 DHX29Q7Z478 1369 aaKnown RBP23.6■■□□□ 1.37
RNF41-205ENST00000548225 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
RNF41-205ENST00000548225 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
RNF41-205ENST00000548225 CROCC2H7BZ55 1655 aa23.57■■□□□ 1.36
RNF41-205ENST00000548225 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
RNF41-205ENST00000548225 MROH2AA6NES4 1674 aa23.55■■□□□ 1.36
RNF41-205ENST00000548225 ABCC5O15440 1437 aa23.53■■□□□ 1.36
RNF41-205ENST00000548225 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
RNF41-205ENST00000548225 C3P01024 1663 aa23.53■■□□□ 1.36
RNF41-205ENST00000548225 DAPK1P53355 1430 aa23.52■■□□□ 1.36
RNF41-205ENST00000548225 LMTK3Q96Q04 1460 aa23.5■■□□□ 1.35
RNF41-205ENST00000548225 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
RNF41-205ENST00000548225 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
RNF41-205ENST00000548225 EIF2AK4Q9P2K8 1649 aaKnown RBP23.49■■□□□ 1.35
RNF41-205ENST00000548225 GGT6Q6P531 493 aa23.49■■□□□ 1.35
RNF41-205ENST00000548225 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
RNF41-205ENST00000548225 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
RNF41-205ENST00000548225 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
RNF41-205ENST00000548225 KIF3BO15066 747 aa23.46■■□□□ 1.35
RNF41-205ENST00000548225 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
RNF41-205ENST00000548225 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
RNF41-205ENST00000548225 ZMYM3Q14202 1370 aa23.44■■□□□ 1.34
RNF41-205ENST00000548225 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
RNF41-205ENST00000548225 KIF15Q9NS87 1388 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms