RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 KIF3BO15066 747 aa8.09□□□□□ -1.11
PTPRB-206ENST00000548122 POGZQ7Z3K3 1410 aa8.09□□□□□ -1.11
PTPRB-206ENST00000548122 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
PTPRB-206ENST00000548122 TSPOAP1O95153 1857 aa8.09□□□□□ -1.11
PTPRB-206ENST00000548122 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
PTPRB-206ENST00000548122 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
PTPRB-206ENST00000548122 DAXXQ9UER7 740 aaPredicted RBP8.08□□□□□ -1.12
PTPRB-206ENST00000548122 SHROOM2Q13796 1616 aa8.08□□□□□ -1.12
PTPRB-206ENST00000548122 DENND4BO75064 1496 aaPredicted RBP8.08□□□□□ -1.12
PTPRB-206ENST00000548122 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
PTPRB-206ENST00000548122 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
PTPRB-206ENST00000548122 FANCAO15360 1455 aa8.08□□□□□ -1.12
PTPRB-206ENST00000548122 NUP153P49790 1475 aaKnown RBP8.08□□□□□ -1.12
PTPRB-206ENST00000548122 RTN4Q9NQC3 1192 aaKnown RBP8.07□□□□□ -1.12
PTPRB-206ENST00000548122 PHLDB1Q86UU1 1377 aa8.07□□□□□ -1.12
PTPRB-206ENST00000548122 ADGRL1O94910 1474 aa8.07□□□□□ -1.12
PTPRB-206ENST00000548122 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
PTPRB-206ENST00000548122 ADCY10Q96PN6 1610 aa8.06□□□□□ -1.12
PTPRB-206ENST00000548122 HAP1P54257 671 aaPredicted RBP8.05□□□□□ -1.12
PTPRB-206ENST00000548122 WASHC2CQ9Y4E1 1318 aa8.05□□□□□ -1.12
PTPRB-206ENST00000548122 POLR3GLQ9BT43 218 aa8.05□□□□□ -1.12
PTPRB-206ENST00000548122 ZNF644Q9H582 1327 aaPredicted RBP8.04□□□□□ -1.12
PTPRB-206ENST00000548122 KANK1Q14678 1352 aa8.04□□□□□ -1.12
PTPRB-206ENST00000548122 KDM6BO15054 1643 aa8.04□□□□□ -1.12
PTPRB-206ENST00000548122 PPP1R15AO75807 674 aaPredicted RBP8.04□□□□□ -1.12
PTPRB-206ENST00000548122 KIF14Q15058 1648 aa8.04□□□□□ -1.12
PTPRB-206ENST00000548122 MAPKBP1O60336 1514 aa8.03□□□□□ -1.12
PTPRB-206ENST00000548122 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
PTPRB-206ENST00000548122 ABCA8O94911 1581 aa8.03□□□□□ -1.12
PTPRB-206ENST00000548122 PCF11O94913 1555 aaKnown RBP8.02□□□□□ -1.13
PTPRB-206ENST00000548122 PLCH2O75038 1416 aa8.01□□□□□ -1.13
PTPRB-206ENST00000548122 PLEKHH2Q8IVE3 1493 aa8.01□□□□□ -1.13
PTPRB-206ENST00000548122 SAMD9Q5K651 1589 aa8.01□□□□□ -1.13
PTPRB-206ENST00000548122 ANKRD30AQ9BXX3 1397 aa8□□□□□ -1.13
PTPRB-206ENST00000548122 ZNF326Q5BKZ1 582 aaKnown RBP8□□□□□ -1.13
PTPRB-206ENST00000548122 NCOA2Q15596 1464 aa8□□□□□ -1.13
PTPRB-206ENST00000548122 EHBP1L1Q8N3D4 1523 aa7.99□□□□□ -1.13
PTPRB-206ENST00000548122 NEO1Q92859 1461 aa7.98□□□□□ -1.13
PTPRB-206ENST00000548122 C14orf37Q86TY3 774 aa7.98□□□□□ -1.13
PTPRB-206ENST00000548122 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
PTPRB-206ENST00000548122 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
PTPRB-206ENST00000548122 LRRC9Q6ZRR7 1453 aa7.97□□□□□ -1.13
PTPRB-206ENST00000548122 MYOM3Q5VTT5 1437 aa7.97□□□□□ -1.13
PTPRB-206ENST00000548122 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.13
PTPRB-206ENST00000548122 SLC4A1APQ9BWU0 796 aaKnown RBP7.96□□□□□ -1.14
PTPRB-206ENST00000548122 HDGFP51858 240 aaKnown RBP7.95□□□□□ -1.14
PTPRB-206ENST00000548122 MAGI3Q5TCQ9 1506 aa7.95□□□□□ -1.14
PTPRB-206ENST00000548122 EID1Q9Y6B2 187 aa7.95□□□□□ -1.14
PTPRB-206ENST00000548122 EIF5BO60841 1220 aaKnown RBP7.94□□□□□ -1.14
PTPRB-206ENST00000548122 KCNA4P22459 653 aa7.94□□□□□ -1.14
PTPRB-206ENST00000548122 KIF15Q9NS87 1388 aa7.93□□□□□ -1.14
PTPRB-206ENST00000548122 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
PTPRB-206ENST00000548122 TIAM1Q13009 1591 aa7.92□□□□□ -1.14
PTPRB-206ENST00000548122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.92□□□□□ -1.14
PTPRB-206ENST00000548122 GPATCH8Q9UKJ3 1502 aaKnown RBP7.92□□□□□ -1.14
PTPRB-206ENST00000548122 HSPA2P54652 639 aa7.92□□□□□ -1.14
PTPRB-206ENST00000548122 FGD6Q6ZV73 1430 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 TRAPPC8Q9Y2L5 1435 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 CCDC141Q6ZP82 1450 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 NUP155O75694 1391 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 CFAP74Q9C0B2 1584 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 ATP10AO60312 1499 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 C9orf84Q5VXU9 1444 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 GLI2P10070 1586 aa7.91□□□□□ -1.14
PTPRB-206ENST00000548122 CFAP43Q8NDM7 1665 aa7.9□□□□□ -1.14
PTPRB-206ENST00000548122 TRIM26Q12899 539 aaPredicted RBP7.9□□□□□ -1.14
PTPRB-206ENST00000548122 DMRT2Q9Y5R5 561 aa7.9□□□□□ -1.14
PTPRB-206ENST00000548122 ZFYVE16Q7Z3T8 1539 aa7.9□□□□□ -1.14
PTPRB-206ENST00000548122 MIA2Q96PC5 1412 aa7.9□□□□□ -1.14
PTPRB-206ENST00000548122 PODXL2Q9NZ53 605 aa7.9□□□□□ -1.14
PTPRB-206ENST00000548122 TULP1O00294 542 aaPredicted RBP7.9□□□□□ -1.15
PTPRB-206ENST00000548122 CENPBP07199 599 aaPredicted RBP7.9□□□□□ -1.15
PTPRB-206ENST00000548122 CCER1Q8TC90 406 aaPredicted RBP7.9□□□□□ -1.15
PTPRB-206ENST00000548122 YEATS2Q9ULM3 1422 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 SYCP2Q9BX26 1530 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 RGL3Q3MIN7 710 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 THEMISQ8N1K5 641 aaPredicted RBP7.89□□□□□ -1.15
PTPRB-206ENST00000548122 CAMSAP2Q08AD1 1489 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 NEUROD1Q13562 356 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
PTPRB-206ENST00000548122 ADRA2BP18089 450 aa7.88□□□□□ -1.15
PTPRB-206ENST00000548122 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
PTPRB-206ENST00000548122 PPP6R1Q9UPN7 881 aa7.88□□□□□ -1.15
PTPRB-206ENST00000548122 KIAA1107Q9UPP5 1409 aa7.88□□□□□ -1.15
PTPRB-206ENST00000548122 A2MP01023 1474 aa7.87□□□□□ -1.15
PTPRB-206ENST00000548122 MYO5CQ9NQX4 1742 aa7.87□□□□□ -1.15
PTPRB-206ENST00000548122 MAGI2Q86UL8 1455 aa7.87□□□□□ -1.15
PTPRB-206ENST00000548122 ANKLE2Q86XL3 938 aa7.87□□□□□ -1.15
PTPRB-206ENST00000548122 ACIN1Q9UKV3 1341 aaKnown RBP7.87□□□□□ -1.15
PTPRB-206ENST00000548122 ABCA9Q8IUA7 1624 aa7.86□□□□□ -1.15
PTPRB-206ENST00000548122 DHX29Q7Z478 1369 aaKnown RBP7.86□□□□□ -1.15
PTPRB-206ENST00000548122 TPRNQ4KMQ1 711 aa7.86□□□□□ -1.15
PTPRB-206ENST00000548122 ZEB1P37275 1124 aaPredicted RBP7.86□□□□□ -1.15
PTPRB-206ENST00000548122 PKD2Q13563 968 aa7.86□□□□□ -1.15
PTPRB-206ENST00000548122 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
PTPRB-206ENST00000548122 COL17A1Q9UMD9 1497 aaPredicted RBP7.85□□□□□ -1.15
PTPRB-206ENST00000548122 ARAP3Q8WWN8 1544 aa7.85□□□□□ -1.15
PTPRB-206ENST00000548122 KDM4FA0A1W2PPD8 638 aa7.85□□□□□ -1.15
PTPRB-206ENST00000548122 ANKRD50Q9ULJ7 1429 aa7.85□□□□□ -1.15
PTPRB-206ENST00000548122 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms