RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
CALCOCO1-208ENST00000547988 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
CALCOCO1-208ENST00000547988 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
CALCOCO1-208ENST00000547988 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
CALCOCO1-208ENST00000547988 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
CALCOCO1-208ENST00000547988 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
CALCOCO1-208ENST00000547988 AKNAQ7Z591 1439 aa17.81■□□□□ 0.44
CALCOCO1-208ENST00000547988 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
CALCOCO1-208ENST00000547988 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
CALCOCO1-208ENST00000547988 COL17A1Q9UMD9 1497 aaPredicted RBP17.78■□□□□ 0.44
CALCOCO1-208ENST00000547988 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
CALCOCO1-208ENST00000547988 ABCC1P33527 1531 aa17.77■□□□□ 0.44
CALCOCO1-208ENST00000547988 FRMPD1Q5SYB0 1578 aa17.77■□□□□ 0.44
CALCOCO1-208ENST00000547988 DENND4BO75064 1496 aaPredicted RBP17.74■□□□□ 0.43
CALCOCO1-208ENST00000547988 PLEKHH2Q8IVE3 1493 aa17.73■□□□□ 0.43
CALCOCO1-208ENST00000547988 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
CALCOCO1-208ENST00000547988 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
CALCOCO1-208ENST00000547988 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
CALCOCO1-208ENST00000547988 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
CALCOCO1-208ENST00000547988 POGZQ7Z3K3 1410 aa17.71■□□□□ 0.43
CALCOCO1-208ENST00000547988 SCAPERQ9BY12 1400 aa17.71■□□□□ 0.43
CALCOCO1-208ENST00000547988 KDM5CP41229 1560 aa17.7■□□□□ 0.42
CALCOCO1-208ENST00000547988 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
CALCOCO1-208ENST00000547988 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
CALCOCO1-208ENST00000547988 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
CALCOCO1-208ENST00000547988 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
CALCOCO1-208ENST00000547988 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
CALCOCO1-208ENST00000547988 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
CALCOCO1-208ENST00000547988 HECW2Q9P2P5 1572 aa17.66■□□□□ 0.42
CALCOCO1-208ENST00000547988 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
CALCOCO1-208ENST00000547988 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
CALCOCO1-208ENST00000547988 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
CALCOCO1-208ENST00000547988 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
CALCOCO1-208ENST00000547988 MAGI2Q86UL8 1455 aa17.64■□□□□ 0.41
CALCOCO1-208ENST00000547988 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
CALCOCO1-208ENST00000547988 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
CALCOCO1-208ENST00000547988 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
CALCOCO1-208ENST00000547988 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
CALCOCO1-208ENST00000547988 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
CALCOCO1-208ENST00000547988 INO80Q9ULG1 1556 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-208ENST00000547988 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-208ENST00000547988 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
CALCOCO1-208ENST00000547988 ZNF644Q9H582 1327 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-208ENST00000547988 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
CALCOCO1-208ENST00000547988 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
CALCOCO1-208ENST00000547988 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
CALCOCO1-208ENST00000547988 ABCA6Q8N139 1617 aa17.58■□□□□ 0.41
CALCOCO1-208ENST00000547988 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
CALCOCO1-208ENST00000547988 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
CALCOCO1-208ENST00000547988 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
CALCOCO1-208ENST00000547988 ADGBQ8N7X0 1667 aa17.57■□□□□ 0.4
CALCOCO1-208ENST00000547988 DIP2CQ9Y2E4 1556 aa17.57■□□□□ 0.4
CALCOCO1-208ENST00000547988 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
CALCOCO1-208ENST00000547988 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-208ENST00000547988 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
CALCOCO1-208ENST00000547988 REREQ9P2R6 1566 aa17.54■□□□□ 0.4
CALCOCO1-208ENST00000547988 YEATS2Q9ULM3 1422 aa17.54■□□□□ 0.4
CALCOCO1-208ENST00000547988 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.4
CALCOCO1-208ENST00000547988 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
CALCOCO1-208ENST00000547988 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
CALCOCO1-208ENST00000547988 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
CALCOCO1-208ENST00000547988 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
CALCOCO1-208ENST00000547988 ATP10AO60312 1499 aa17.5■□□□□ 0.39
CALCOCO1-208ENST00000547988 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CALCOCO1-208ENST00000547988 DAPK1P53355 1430 aa17.49■□□□□ 0.39
CALCOCO1-208ENST00000547988 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-208ENST00000547988 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
CALCOCO1-208ENST00000547988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.49■□□□□ 0.39
CALCOCO1-208ENST00000547988 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
CALCOCO1-208ENST00000547988 ABCC5O15440 1437 aa17.47■□□□□ 0.39
CALCOCO1-208ENST00000547988 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
CALCOCO1-208ENST00000547988 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
CALCOCO1-208ENST00000547988 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
CALCOCO1-208ENST00000547988 AGLP35573 1532 aa17.44■□□□□ 0.38
CALCOCO1-208ENST00000547988 A2MP01023 1474 aa17.43■□□□□ 0.38
CALCOCO1-208ENST00000547988 ADAMTSL3P82987 1691 aa17.42■□□□□ 0.38
CALCOCO1-208ENST00000547988 FER1L4A9Z1Z3 1794 aa17.42■□□□□ 0.38
CALCOCO1-208ENST00000547988 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
CALCOCO1-208ENST00000547988 ADGRL2O95490 1459 aa17.41■□□□□ 0.38
CALCOCO1-208ENST00000547988 DUOX2Q9NRD8 1548 aa17.39■□□□□ 0.37
CALCOCO1-208ENST00000547988 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
CALCOCO1-208ENST00000547988 MADDQ8WXG6 1647 aa17.36■□□□□ 0.37
CALCOCO1-208ENST00000547988 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-208ENST00000547988 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
CALCOCO1-208ENST00000547988 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
CALCOCO1-208ENST00000547988 RNF17Q9BXT8 1623 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-208ENST00000547988 RIMS1Q86UR5 1692 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-208ENST00000547988 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
CALCOCO1-208ENST00000547988 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
CALCOCO1-208ENST00000547988 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
CALCOCO1-208ENST00000547988 ROCK1Q13464 1354 aa17.33■□□□□ 0.36
CALCOCO1-208ENST00000547988 ERBINQ96RT1 1412 aa17.32■□□□□ 0.36
CALCOCO1-208ENST00000547988 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
CALCOCO1-208ENST00000547988 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
CALCOCO1-208ENST00000547988 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
CALCOCO1-208ENST00000547988 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
CALCOCO1-208ENST00000547988 FAM135AQ9P2D6 1515 aa17.3■□□□□ 0.36
CALCOCO1-208ENST00000547988 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
CALCOCO1-208ENST00000547988 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
CALCOCO1-208ENST00000547988 ITGAEP38570 1179 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms