RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
CASC18-201ENST00000547465 CDK11AQ9UQ88 783 aaPredicted RBP6.93□□□□□ -1.3
CASC18-201ENST00000547465 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
CASC18-201ENST00000547465 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
CASC18-201ENST00000547465 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
CASC18-201ENST00000547465 FOXD4L4Q8WXT5 416 aaPredicted RBP6.91□□□□□ -1.3
CASC18-201ENST00000547465 GZF1Q9H116 711 aaPredicted RBP6.91□□□□□ -1.3
CASC18-201ENST00000547465 DDRGK1Q96HY6 314 aa6.9□□□□□ -1.3
CASC18-201ENST00000547465 ONECUT3O60422 494 aaPredicted RBP6.89□□□□□ -1.31
CASC18-201ENST00000547465 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
CASC18-201ENST00000547465 CCDC97Q96F63 343 aaPredicted RBP6.89□□□□□ -1.31
CASC18-201ENST00000547465 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
CASC18-201ENST00000547465 RBM26Q5T8P6 1007 aaKnown RBP6.88□□□□□ -1.31
CASC18-201ENST00000547465 SERPINA10Q9UK55 444 aa6.88□□□□□ -1.31
CASC18-201ENST00000547465 E9PSI1 815 aa6.87□□□□□ -1.31
CASC18-201ENST00000547465 ZNF777Q9ULD5 760 aaPredicted RBP6.87□□□□□ -1.31
CASC18-201ENST00000547465 PYGBP11216 843 aa6.86□□□□□ -1.31
CASC18-201ENST00000547465 RETREG2Q8NC44 543 aa6.84□□□□□ -1.31
CASC18-201ENST00000547465 PUS7Q96PZ0 661 aaKnown RBP6.84□□□□□ -1.31
CASC18-201ENST00000547465 PROSER2Q86WR7 435 aaPredicted RBP6.83□□□□□ -1.32
CASC18-201ENST00000547465 FBXW7Q969H0 707 aa6.83□□□□□ -1.32
CASC18-201ENST00000547465 MFRPQ9BY79 579 aa6.83□□□□□ -1.32
CASC18-201ENST00000547465 ARIH1Q9Y4X5 557 aaPredicted RBP6.83□□□□□ -1.32
CASC18-201ENST00000547465 GOPCQ9HD26 462 aa6.82□□□□□ -1.32
CASC18-201ENST00000547465 PPP1R37O75864 691 aa6.81□□□□□ -1.32
CASC18-201ENST00000547465 RASEFQ8IZ41 740 aa6.81□□□□□ -1.32
CASC18-201ENST00000547465 MLLT3P42568 568 aaPredicted RBP6.8□□□□□ -1.32
CASC18-201ENST00000547465 IRF5Q13568 498 aa6.8□□□□□ -1.32
CASC18-201ENST00000547465 MCM6Q14566 821 aa6.8□□□□□ -1.32
CASC18-201ENST00000547465 LARP6Q9BRS8 491 aaKnown RBP6.8□□□□□ -1.32
CASC18-201ENST00000547465 REM2Q8IYK8 340 aaPredicted RBP6.79□□□□□ -1.32
CASC18-201ENST00000547465 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
CASC18-201ENST00000547465 PCMTD1Q96MG8 357 aaPredicted RBP6.79□□□□□ -1.32
CASC18-201ENST00000547465 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASC18-201ENST00000547465 USP35Q9P2H5 1018 aa6.78□□□□□ -1.32
CASC18-201ENST00000547465 NCKAP5LQ9HCH0 1330 aa6.77□□□□□ -1.32
CASC18-201ENST00000547465 PDE4AP27815 886 aa6.77□□□□□ -1.33
CASC18-201ENST00000547465 PDAP1Q13442 181 aaKnown RBP6.77□□□□□ -1.33
CASC18-201ENST00000547465 ZNF467Q7Z7K2 595 aaPredicted RBP6.77□□□□□ -1.33
CASC18-201ENST00000547465 MINK1Q8N4C8 1332 aaPredicted RBP6.76□□□□□ -1.33
CASC18-201ENST00000547465 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
CASC18-201ENST00000547465 MFSD10Q14728 455 aa6.76□□□□□ -1.33
CASC18-201ENST00000547465 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
CASC18-201ENST00000547465 FNBP4Q8N3X1 1017 aaPredicted RBP6.76□□□□□ -1.33
CASC18-201ENST00000547465 PDE4CQ08493 712 aa6.75□□□□□ -1.33
CASC18-201ENST00000547465 AMHR2Q16671 573 aa6.75□□□□□ -1.33
CASC18-201ENST00000547465 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
CASC18-201ENST00000547465 CCDC102AQ96A19 550 aa6.74□□□□□ -1.33
CASC18-201ENST00000547465 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
CASC18-201ENST00000547465 GABBR2O75899 941 aa6.73□□□□□ -1.33
CASC18-201ENST00000547465 NLRP6P59044 892 aa6.73□□□□□ -1.33
CASC18-201ENST00000547465 CAMK2BQ13554 666 aa6.73□□□□□ -1.33
CASC18-201ENST00000547465 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
CASC18-201ENST00000547465 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
CASC18-201ENST00000547465 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
CASC18-201ENST00000547465 ACIN1Q9UKV3 1341 aaKnown RBP6.72□□□□□ -1.33
CASC18-201ENST00000547465 GPR37O15354 613 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 MAP2K5Q13163 448 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 RSPH4AQ5TD94 716 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 FBXO22Q8NEZ5 403 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 CREBZFQ9NS37 354 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
CASC18-201ENST00000547465 IRF6O14896 467 aa6.7□□□□□ -1.34
CASC18-201ENST00000547465 MYT1LQ9UL68 1186 aa6.7□□□□□ -1.34
CASC18-201ENST00000547465 PSEN1P49768 467 aa6.69□□□□□ -1.34
CASC18-201ENST00000547465 KCNA1Q09470 495 aa6.69□□□□□ -1.34
CASC18-201ENST00000547465 TTLL12Q14166 644 aaPredicted RBP6.69□□□□□ -1.34
CASC18-201ENST00000547465 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
CASC18-201ENST00000547465 POTEMA6NI47 508 aa6.67□□□□□ -1.34
CASC18-201ENST00000547465 PCDHB8Q9UN66 801 aa6.67□□□□□ -1.34
CASC18-201ENST00000547465 PHF8Q9UPP1 1060 aa6.67□□□□□ -1.34
CASC18-201ENST00000547465 ZNF330Q9Y3S2 320 aaPredicted RBP6.67□□□□□ -1.34
CASC18-201ENST00000547465 PCDHB13Q9Y5F0 798 aa6.67□□□□□ -1.34
CASC18-201ENST00000547465 SOX12O15370 315 aa6.66□□□□□ -1.34
CASC18-201ENST00000547465 CCDC27Q2M243 656 aa6.66□□□□□ -1.34
CASC18-201ENST00000547465 SH3D19Q5HYK7 790 aa6.66□□□□□ -1.34
CASC18-201ENST00000547465 SPDYE16A6NNV3 312 aaPredicted RBP6.65□□□□□ -1.34
CASC18-201ENST00000547465 BRD1O95696 1058 aa6.65□□□□□ -1.34
CASC18-201ENST00000547465 FAM177A1Q8N128 213 aaPredicted RBP6.65□□□□□ -1.34
CASC18-201ENST00000547465 EFCAB3Q8N7B9 438 aa6.65□□□□□ -1.34
CASC18-201ENST00000547465 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
CASC18-201ENST00000547465 NUTM2FA1L443 756 aa6.64□□□□□ -1.35
CASC18-201ENST00000547465 ATP1B4Q9UN42 357 aaPredicted RBP6.64□□□□□ -1.35
CASC18-201ENST00000547465 MS4A1P11836 297 aa6.63□□□□□ -1.35
CASC18-201ENST00000547465 GIGYF2Q6Y7W6 1299 aaKnown RBP6.63□□□□□ -1.35
CASC18-201ENST00000547465 SPDYE5A6NIY4 337 aa6.62□□□□□ -1.35
CASC18-201ENST00000547465 DPYSL4O14531 572 aa6.62□□□□□ -1.35
CASC18-201ENST00000547465 GNPATO15228 680 aa6.62□□□□□ -1.35
CASC18-201ENST00000547465 PRR29P0C7W0 189 aa6.62□□□□□ -1.35
CASC18-201ENST00000547465 POTEGQ6S5H5 508 aa6.62□□□□□ -1.35
CASC18-201ENST00000547465 SPDYE1Q8NFV5 336 aaPredicted RBP6.62□□□□□ -1.35
CASC18-201ENST00000547465 SKIV2LQ15477 1246 aaKnown RBP6.61□□□□□ -1.35
CASC18-201ENST00000547465 C19orf67A6NJJ6 358 aa6.6□□□□□ -1.35
CASC18-201ENST00000547465 PDIA6Q15084 440 aa6.6□□□□□ -1.35
CASC18-201ENST00000547465 CALR3Q96L12 384 aaKnown RBP6.6□□□□□ -1.35
CASC18-201ENST00000547465 CABP2Q9NPB3 220 aa6.6□□□□□ -1.35
CASC18-201ENST00000547465 POTEIP0CG38 1075 aa6.59□□□□□ -1.35
CASC18-201ENST00000547465 SND1Q7KZF4 910 aaKnown RBP eCLIP6.59□□□□□ -1.35
CASC18-201ENST00000547465 OXER1Q8TDS5 423 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms