RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 EHBP1L1Q8N3D4 1523 aa38.07■■■■□ 3.69
RBFOX1-209ENST00000547427 CDC42BPAQ5VT25 1732 aa38.07■■■■□ 3.69
RBFOX1-209ENST00000547427 RICTORQ6R327 1708 aa38.07■■■■□ 3.69
RBFOX1-209ENST00000547427 SCAPERQ9BY12 1400 aa38.06■■■■□ 3.68
RBFOX1-209ENST00000547427 AEBP2Q6ZN18 517 aaPredicted RBP38.05■■■■□ 3.68
RBFOX1-209ENST00000547427 TIAM1Q13009 1591 aa38.04■■■■□ 3.68
RBFOX1-209ENST00000547427 CCNB3Q8WWL7 1395 aa37.99■■■■□ 3.67
RBFOX1-209ENST00000547427 GPATCH8Q9UKJ3 1502 aaKnown RBP37.95■■■■□ 3.67
RBFOX1-209ENST00000547427 POGZQ7Z3K3 1410 aa37.95■■■■□ 3.67
RBFOX1-209ENST00000547427 ZNF777Q9ULD5 760 aaPredicted RBP37.93■■■■□ 3.66
RBFOX1-209ENST00000547427 SUPT6HQ7KZ85 1726 aaKnown RBP37.92■■■■□ 3.66
RBFOX1-209ENST00000547427 APLP2Q06481 763 aa37.91■■■■□ 3.66
RBFOX1-209ENST00000547427 ZMYM4Q5VZL5 1548 aa37.91■■■■□ 3.66
RBFOX1-209ENST00000547427 KDM4FA0A1W2PPD8 638 aa37.89■■■■□ 3.66
RBFOX1-209ENST00000547427 CFDP1Q9UEE9 299 aaPredicted RBP37.89■■■■□ 3.66
RBFOX1-209ENST00000547427 MAP3K1Q13233 1512 aa37.88■■■■□ 3.65
RBFOX1-209ENST00000547427 ZNF518AQ6AHZ1 1483 aa37.87■■■■□ 3.65
RBFOX1-209ENST00000547427 LRRC9Q6ZRR7 1453 aa37.87■■■■□ 3.65
RBFOX1-209ENST00000547427 ITSN2Q9NZM3 1697 aa37.87■■■■□ 3.65
RBFOX1-209ENST00000547427 ABCC1P33527 1531 aa37.86■■■■□ 3.65
RBFOX1-209ENST00000547427 ARHGEF40Q8TER5 1519 aa37.85■■■■□ 3.65
RBFOX1-209ENST00000547427 ZFYVE16Q7Z3T8 1539 aa37.84■■■■□ 3.65
RBFOX1-209ENST00000547427 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
RBFOX1-209ENST00000547427 NCOA2Q15596 1464 aa37.83■■■■□ 3.65
RBFOX1-209ENST00000547427 SAMD9LQ8IVG5 1584 aa37.81■■■■□ 3.64
RBFOX1-209ENST00000547427 AFAP1Q8N556 730 aa37.81■■■■□ 3.64
RBFOX1-209ENST00000547427 MYT1LQ9UL68 1186 aa37.81■■■■□ 3.64
RBFOX1-209ENST00000547427 KANK4Q5T7N3 995 aaPredicted RBP37.78■■■■□ 3.64
RBFOX1-209ENST00000547427 YEATS2Q9ULM3 1422 aa37.78■■■■□ 3.64
RBFOX1-209ENST00000547427 ARHGEF12Q9NZN5 1544 aa37.77■■■■□ 3.64
RBFOX1-209ENST00000547427 ARID4BQ4LE39 1312 aaPredicted RBP37.77■■■■□ 3.64
RBFOX1-209ENST00000547427 KDM5CP41229 1560 aa37.76■■■■□ 3.63
RBFOX1-209ENST00000547427 TRAPPC8Q9Y2L5 1435 aa37.75■■■■□ 3.63
RBFOX1-209ENST00000547427 PLEKHH2Q8IVE3 1493 aa37.74■■■■□ 3.63
RBFOX1-209ENST00000547427 SYCP2Q9BX26 1530 aa37.74■■■■□ 3.63
RBFOX1-209ENST00000547427 HECW2Q9P2P5 1572 aa37.72■■■■□ 3.63
RBFOX1-209ENST00000547427 HNRNPMP52272 730 aaKnown RBP eCLIP37.71■■■■□ 3.63
RBFOX1-209ENST00000547427 KIAA1107Q9UPP5 1409 aa37.68■■■■□ 3.62
RBFOX1-209ENST00000547427 ATP10AO60312 1499 aa37.64■■■■□ 3.62
RBFOX1-209ENST00000547427 ZNF644Q9H582 1327 aaPredicted RBP37.64■■■■□ 3.62
RBFOX1-209ENST00000547427 MLH3Q9UHC1 1453 aa37.64■■■■□ 3.62
RBFOX1-209ENST00000547427 BCORL1Q5H9F3 1711 aa37.6■■■■□ 3.61
RBFOX1-209ENST00000547427 C9orf84Q5VXU9 1444 aa37.6■■■■□ 3.61
RBFOX1-209ENST00000547427 SPAG9O60271 1321 aaKnown RBP37.58■■■■□ 3.61
RBFOX1-209ENST00000547427 DIP2CQ9Y2E4 1556 aa37.56■■■■□ 3.6
RBFOX1-209ENST00000547427 KIDINS220Q9ULH0 1771 aa37.56■■■■□ 3.6
RBFOX1-209ENST00000547427 CAMSAP2Q08AD1 1489 aa37.56■■■■□ 3.6
RBFOX1-209ENST00000547427 SIGLEC1Q9BZZ2 1709 aa37.56■■■■□ 3.6
RBFOX1-209ENST00000547427 ABCA6Q8N139 1617 aa37.55■■■■□ 3.6
RBFOX1-209ENST00000547427 ADAMTSL3P82987 1691 aa37.53■■■■□ 3.6
RBFOX1-209ENST00000547427 MYOM3Q5VTT5 1437 aa37.52■■■■□ 3.6
RBFOX1-209ENST00000547427 MBD5Q9P267 1494 aa37.49■■■■□ 3.59
RBFOX1-209ENST00000547427 ATP7AQ04656 1500 aa37.48■■■■□ 3.59
RBFOX1-209ENST00000547427 MLECQ14165 292 aa37.48■■■■□ 3.59
RBFOX1-209ENST00000547427 MIA2Q96PC5 1412 aa37.45■■■■□ 3.59
RBFOX1-209ENST00000547427 MADDQ8WXG6 1647 aa37.45■■■■□ 3.59
RBFOX1-209ENST00000547427 INO80Q9ULG1 1556 aaPredicted RBP37.45■■■■□ 3.59
RBFOX1-209ENST00000547427 REREQ9P2R6 1566 aa37.44■■■■□ 3.58
RBFOX1-209ENST00000547427 RSPH4AQ5TD94 716 aa37.43■■■■□ 3.58
RBFOX1-209ENST00000547427 CCDC141Q6ZP82 1450 aa37.42■■■■□ 3.58
RBFOX1-209ENST00000547427 RIMS1Q86UR5 1692 aaKnown RBP37.38■■■■□ 3.57
RBFOX1-209ENST00000547427 ARHGEF5Q12774 1597 aa37.38■■■■□ 3.57
RBFOX1-209ENST00000547427 FER1L4A9Z1Z3 1794 aa37.35■■■■□ 3.57
RBFOX1-209ENST00000547427 PTPRMP28827 1452 aa37.35■■■■□ 3.57
RBFOX1-209ENST00000547427 TSPY4P0CV99 314 aa37.34■■■■□ 3.57
RBFOX1-209ENST00000547427 TSPY10P0CW01 314 aa37.34■■■■□ 3.57
RBFOX1-209ENST00000547427 RTEL1-TNFRSF6BF6WH68 1400 aa37.34■■■■□ 3.57
RBFOX1-209ENST00000547427 AGLP35573 1532 aa37.32■■■■□ 3.57
RBFOX1-209ENST00000547427 ADGBQ8N7X0 1667 aa37.32■■■■□ 3.57
RBFOX1-209ENST00000547427 PTPN23Q9H3S7 1636 aa37.32■■■■□ 3.56
RBFOX1-209ENST00000547427 A2MP01023 1474 aa37.29■■■■□ 3.56
RBFOX1-209ENST00000547427 FGD6Q6ZV73 1430 aa37.28■■■■□ 3.56
RBFOX1-209ENST00000547427 PLPPR3Q6T4P5 718 aa37.23■■■■□ 3.55
RBFOX1-209ENST00000547427 ESF1Q9H501 851 aaKnown RBP37.22■■■■□ 3.55
RBFOX1-209ENST00000547427 PLXNC1O60486 1568 aa37.21■■■■□ 3.55
RBFOX1-209ENST00000547427 PPARGC1BQ86YN6 1023 aaKnown RBP37.19■■■■□ 3.54
RBFOX1-209ENST00000547427 TCOF1Q13428 1488 aaKnown RBP37.18■■■■□ 3.54
RBFOX1-209ENST00000547427 MAST1Q9Y2H9 1570 aa37.17■■■■□ 3.54
RBFOX1-209ENST00000547427 DHX29Q7Z478 1369 aaKnown RBP37.15■■■■□ 3.54
RBFOX1-209ENST00000547427 CROCC2H7BZ55 1655 aa37.12■■■■□ 3.53
RBFOX1-209ENST00000547427 FAM50AQ14320 339 aaKnown RBP37.12■■■■□ 3.53
RBFOX1-209ENST00000547427 DNMT1P26358 1616 aaKnown RBP37.1■■■■□ 3.53
RBFOX1-209ENST00000547427 GGT6Q6P531 493 aa37.1■■■■□ 3.53
RBFOX1-209ENST00000547427 ABCC5O15440 1437 aa37.09■■■■□ 3.53
RBFOX1-209ENST00000547427 DAPK1P53355 1430 aa37.08■■■■□ 3.53
RBFOX1-209ENST00000547427 SHANK2Q9UPX8 1470 aa37.06■■■■□ 3.52
RBFOX1-209ENST00000547427 CNTLNQ9NXG0 1405 aa37.04■■■■□ 3.52
RBFOX1-209ENST00000547427 KIF3BO15066 747 aa37.04■■■■□ 3.52
RBFOX1-209ENST00000547427 CEBPAP49715 358 aaPredicted RBP37.04■■■■□ 3.52
RBFOX1-209ENST00000547427 C3P01024 1663 aa36.99■■■■□ 3.51
RBFOX1-209ENST00000547427 CLTCQ00610 1675 aaKnown RBP36.98■■■■□ 3.51
RBFOX1-209ENST00000547427 CHIC2Q9UKJ5 165 aa36.97■■■■□ 3.51
RBFOX1-209ENST00000547427 PPP6R1Q9UPN7 881 aa36.96■■■■□ 3.51
RBFOX1-209ENST00000547427 MROH2AA6NES4 1674 aa36.96■■■■□ 3.51
RBFOX1-209ENST00000547427 RRP7BPQ9NSQ0 103 aa36.94■■■■□ 3.5
RBFOX1-209ENST00000547427 DUOX2Q9NRD8 1548 aa36.94■■■■□ 3.5
RBFOX1-209ENST00000547427 KIF15Q9NS87 1388 aa36.93■■■■□ 3.5
RBFOX1-209ENST00000547427 ANKRD30AQ9BXX3 1397 aa36.91■■■■□ 3.5
RBFOX1-209ENST00000547427 EIF2AK4Q9P2K8 1649 aaKnown RBP36.9■■■■□ 3.5
RBFOX1-209ENST00000547427 ZMYM3Q14202 1370 aa36.89■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms