RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
SSH1-206ENST00000547381 POGZQ7Z3K3 1410 aa19.85■□□□□ 0.77
SSH1-206ENST00000547381 ARHGEF40Q8TER5 1519 aa19.85■□□□□ 0.77
SSH1-206ENST00000547381 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.77
SSH1-206ENST00000547381 ARID4BQ4LE39 1312 aaPredicted RBP19.82■□□□□ 0.76
SSH1-206ENST00000547381 ZFYVE16Q7Z3T8 1539 aa19.81■□□□□ 0.76
SSH1-206ENST00000547381 CDC42BPBQ9Y5S2 1711 aa19.81■□□□□ 0.76
SSH1-206ENST00000547381 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
SSH1-206ENST00000547381 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
SSH1-206ENST00000547381 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
SSH1-206ENST00000547381 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
SSH1-206ENST00000547381 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
SSH1-206ENST00000547381 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
SSH1-206ENST00000547381 BCORL1Q5H9F3 1711 aa19.76■□□□□ 0.75
SSH1-206ENST00000547381 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
SSH1-206ENST00000547381 GPATCH8Q9UKJ3 1502 aaKnown RBP19.74■□□□□ 0.75
SSH1-206ENST00000547381 KDM5CP41229 1560 aa19.74■□□□□ 0.75
SSH1-206ENST00000547381 ABCC1P33527 1531 aa19.73■□□□□ 0.75
SSH1-206ENST00000547381 ATP10AO60312 1499 aa19.73■□□□□ 0.75
SSH1-206ENST00000547381 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
SSH1-206ENST00000547381 EHBP1L1Q8N3D4 1523 aa19.71■□□□□ 0.75
SSH1-206ENST00000547381 CFDP1Q9UEE9 299 aaPredicted RBP19.71■□□□□ 0.75
SSH1-206ENST00000547381 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
SSH1-206ENST00000547381 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
SSH1-206ENST00000547381 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
SSH1-206ENST00000547381 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
SSH1-206ENST00000547381 PTPRMP28827 1452 aa19.7■□□□□ 0.74
SSH1-206ENST00000547381 MLH3Q9UHC1 1453 aa19.69■□□□□ 0.74
SSH1-206ENST00000547381 ARHGEF12Q9NZN5 1544 aa19.69■□□□□ 0.74
SSH1-206ENST00000547381 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
SSH1-206ENST00000547381 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
SSH1-206ENST00000547381 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
SSH1-206ENST00000547381 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
SSH1-206ENST00000547381 MADDQ8WXG6 1647 aa19.67■□□□□ 0.74
SSH1-206ENST00000547381 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
SSH1-206ENST00000547381 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
SSH1-206ENST00000547381 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
SSH1-206ENST00000547381 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
SSH1-206ENST00000547381 MLECQ14165 292 aa19.63■□□□□ 0.73
SSH1-206ENST00000547381 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
SSH1-206ENST00000547381 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSH1-206ENST00000547381 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
SSH1-206ENST00000547381 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
SSH1-206ENST00000547381 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
SSH1-206ENST00000547381 SPAG9O60271 1321 aaKnown RBP19.6■□□□□ 0.73
SSH1-206ENST00000547381 RIMS1Q86UR5 1692 aaKnown RBP19.6■□□□□ 0.73
SSH1-206ENST00000547381 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
SSH1-206ENST00000547381 ABCA6Q8N139 1617 aa19.59■□□□□ 0.73
SSH1-206ENST00000547381 NCOA2Q15596 1464 aa19.59■□□□□ 0.73
SSH1-206ENST00000547381 KIDINS220Q9ULH0 1771 aa19.58■□□□□ 0.73
SSH1-206ENST00000547381 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
SSH1-206ENST00000547381 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
SSH1-206ENST00000547381 AGLP35573 1532 aa19.56■□□□□ 0.72
SSH1-206ENST00000547381 ZNF644Q9H582 1327 aaPredicted RBP19.55■□□□□ 0.72
SSH1-206ENST00000547381 APLP2Q06481 763 aa19.53■□□□□ 0.72
SSH1-206ENST00000547381 ATP7AQ04656 1500 aa19.52■□□□□ 0.72
SSH1-206ENST00000547381 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
SSH1-206ENST00000547381 MBD5Q9P267 1494 aa19.52■□□□□ 0.72
SSH1-206ENST00000547381 INO80Q9ULG1 1556 aaPredicted RBP19.5■□□□□ 0.71
SSH1-206ENST00000547381 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
SSH1-206ENST00000547381 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
SSH1-206ENST00000547381 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
SSH1-206ENST00000547381 RTEL1-TNFRSF6BF6WH68 1400 aa19.48■□□□□ 0.71
SSH1-206ENST00000547381 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
SSH1-206ENST00000547381 A2MP01023 1474 aa19.47■□□□□ 0.71
SSH1-206ENST00000547381 CCDC141Q6ZP82 1450 aa19.46■□□□□ 0.71
SSH1-206ENST00000547381 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
SSH1-206ENST00000547381 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
SSH1-206ENST00000547381 PLXNC1O60486 1568 aa19.44■□□□□ 0.7
SSH1-206ENST00000547381 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
SSH1-206ENST00000547381 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
SSH1-206ENST00000547381 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
SSH1-206ENST00000547381 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
SSH1-206ENST00000547381 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
SSH1-206ENST00000547381 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
SSH1-206ENST00000547381 CEBPAP49715 358 aaPredicted RBP19.42■□□□□ 0.7
SSH1-206ENST00000547381 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
SSH1-206ENST00000547381 DHX29Q7Z478 1369 aaKnown RBP19.38■□□□□ 0.69
SSH1-206ENST00000547381 SETD1BQ9UPS6 1966 aaKnown RBP19.37■□□□□ 0.69
SSH1-206ENST00000547381 C3P01024 1663 aa19.36■□□□□ 0.69
SSH1-206ENST00000547381 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
SSH1-206ENST00000547381 GGT6Q6P531 493 aa19.36■□□□□ 0.69
SSH1-206ENST00000547381 MROH2AA6NES4 1674 aa19.35■□□□□ 0.69
SSH1-206ENST00000547381 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
SSH1-206ENST00000547381 HSPA2P54652 639 aa19.34■□□□□ 0.69
SSH1-206ENST00000547381 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SSH1-206ENST00000547381 KIF3BO15066 747 aa19.31■□□□□ 0.68
SSH1-206ENST00000547381 NPATQ14207 1427 aa19.31■□□□□ 0.68
SSH1-206ENST00000547381 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
SSH1-206ENST00000547381 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
SSH1-206ENST00000547381 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
SSH1-206ENST00000547381 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.68
SSH1-206ENST00000547381 FAM135AQ9P2D6 1515 aa19.26■□□□□ 0.67
SSH1-206ENST00000547381 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
SSH1-206ENST00000547381 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
SSH1-206ENST00000547381 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
SSH1-206ENST00000547381 ABCC5O15440 1437 aa19.23■□□□□ 0.67
SSH1-206ENST00000547381 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
SSH1-206ENST00000547381 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
SSH1-206ENST00000547381 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms