RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	PBX2	P40425	430 aa		13.36	□□□□□ -0.27
LGR5-204	ENST00000547310	SOX12	O15370	315 aa		13.29	□□□□□ -0.28
LGR5-204	ENST00000547310	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
LGR5-204	ENST00000547310	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.25	□□□□□ -0.29
LGR5-204	ENST00000547310	POTEE	Q6S8J3	1075 aa		13.23	□□□□□ -0.29
LGR5-204	ENST00000547310	SPOCK2	Q92563	424 aa		13.23	□□□□□ -0.29
LGR5-204	ENST00000547310	MS4A4A	Q96JQ5	239 aa		13.22	□□□□□ -0.29
LGR5-204	ENST00000547310	TRIM41	Q8WV44	630 aa		13.17	□□□□□ -0.3
LGR5-204	ENST00000547310	RGS20	O76081	388 aa		13.16	□□□□□ -0.3
LGR5-204	ENST00000547310	AXIN2	Q9Y2T1	843 aa		13.16	□□□□□ -0.3
LGR5-204	ENST00000547310	ADGRD1	Q6QNK2	874 aa		13.15	□□□□□ -0.3
LGR5-204	ENST00000547310	NUDT7	P0C024	238 aa		13.12	□□□□□ -0.31
LGR5-204	ENST00000547310	LHX6	Q9UPM6	363 aa		13.12	□□□□□ -0.31
LGR5-204	ENST00000547310	PHF8	Q9UPP1	1060 aa		13.1	□□□□□ -0.31
LGR5-204	ENST00000547310	ARHGAP33	O14559	1287 aa		13.09	□□□□□ -0.31
LGR5-204	ENST00000547310	SLC34A2	O95436	690 aa		13.09	□□□□□ -0.31
LGR5-204	ENST00000547310	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.09	□□□□□ -0.31
LGR5-204	ENST00000547310	TK2	O00142	265 aa		13.08	□□□□□ -0.32
LGR5-204	ENST00000547310	KIF3C	O14782	793 aa		13.07	□□□□□ -0.32
LGR5-204	ENST00000547310	HR	O43593	1189 aa		13.06	□□□□□ -0.32
LGR5-204	ENST00000547310	IFFO2	Q5TF58	517 aa		13.04	□□□□□ -0.32
LGR5-204	ENST00000547310	PSD	A5PKW4	1024 aa	Predicted RBP	13.03	□□□□□ -0.32
LGR5-204	ENST00000547310	IRX2	Q9BZI1	471 aa	Predicted RBP	13.03	□□□□□ -0.32
LGR5-204	ENST00000547310	PCDHGA4	Q9Y5G9	962 aa		13.03	□□□□□ -0.32
LGR5-204	ENST00000547310	NLRP6	P59044	892 aa		12.99	□□□□□ -0.33
LGR5-204	ENST00000547310	C2orf72	A6NCS6	295 aa		12.98	□□□□□ -0.33
LGR5-204	ENST00000547310	RIOK3	O14730	519 aa	Known RBP	12.97	□□□□□ -0.33
LGR5-204	ENST00000547310	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.96	□□□□□ -0.33
LGR5-204	ENST00000547310	ZFP91	Q96JP5	570 aa	Predicted RBP	12.96	□□□□□ -0.33
LGR5-204	ENST00000547310	FBXO22	Q8NEZ5	403 aa		12.95	□□□□□ -0.34
LGR5-204	ENST00000547310	VGF	O15240	615 aa	Predicted RBP	12.94	□□□□□ -0.34
LGR5-204	ENST00000547310	KCTD12	Q96CX2	325 aa	Known RBP	12.94	□□□□□ -0.34
LGR5-204	ENST00000547310	DMRTA1	Q5VZB9	504 aa		12.91	□□□□□ -0.34
LGR5-204	ENST00000547310	KDM4F	A0A1W2PPD8	638 aa		12.9	□□□□□ -0.34
LGR5-204	ENST00000547310	RNF25	Q96BH1	459 aa	Predicted RBP	12.88	□□□□□ -0.35
LGR5-204	ENST00000547310	STAC3	Q96MF2	364 aa		12.88	□□□□□ -0.35
LGR5-204	ENST00000547310	PSEN2	P49810	448 aa		12.86	□□□□□ -0.35
LGR5-204	ENST00000547310		A0A0G2JS52	829 aa		12.84	□□□□□ -0.35
LGR5-204	ENST00000547310	PTPN5	P54829	565 aa		12.79	□□□□□ -0.36
LGR5-204	ENST00000547310	TMC2	Q8TDI7	906 aa		12.79	□□□□□ -0.36
LGR5-204	ENST00000547310	PTCD2	Q8WV60	388 aa	Known RBP	12.79	□□□□□ -0.36
LGR5-204	ENST00000547310	MFRP	Q9BY79	579 aa		12.78	□□□□□ -0.36
LGR5-204	ENST00000547310	PPP4R3B	Q5MIZ7	849 aa		12.77	□□□□□ -0.37
LGR5-204	ENST00000547310	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.74	□□□□□ -0.37
LGR5-204	ENST00000547310	VPS9D1	Q9Y2B5	631 aa		12.73	□□□□□ -0.37
LGR5-204	ENST00000547310	TAOK2	Q9UL54	1235 aa		12.72	□□□□□ -0.37
LGR5-204	ENST00000547310	KCNH8	Q96L42	1107 aa		12.71	□□□□□ -0.37
LGR5-204	ENST00000547310	SLC4A5	Q9BY07	1137 aa		12.71	□□□□□ -0.37
LGR5-204	ENST00000547310	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.71	□□□□□ -0.37
LGR5-204	ENST00000547310	THSD4	Q6ZMP0	1018 aa		12.7	□□□□□ -0.38
LGR5-204	ENST00000547310		Q6ZNB5	142 aa		12.66	□□□□□ -0.38
LGR5-204	ENST00000547310	KCNK17	Q96T54	332 aa		12.66	□□□□□ -0.38
LGR5-204	ENST00000547310	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.65	□□□□□ -0.38
LGR5-204	ENST00000547310	RTN4	Q9NQC3	1192 aa	Known RBP	12.64	□□□□□ -0.39
LGR5-204	ENST00000547310	STK24	Q9Y6E0	443 aa		12.64	□□□□□ -0.39
LGR5-204	ENST00000547310	TBC1D12	O60347	775 aa		12.62	□□□□□ -0.39
LGR5-204	ENST00000547310	FOXK1	P85037	733 aa		12.58	□□□□□ -0.4
LGR5-204	ENST00000547310	PKD2	Q13563	968 aa		12.57	□□□□□ -0.4
LGR5-204	ENST00000547310	WNT2B	Q93097	391 aa		12.57	□□□□□ -0.4
LGR5-204	ENST00000547310	GOLGA8CP	A6NN73	597 aa		12.55	□□□□□ -0.4
LGR5-204	ENST00000547310	ITGBL1	O95965	494 aa	Predicted RBP	12.55	□□□□□ -0.4
LGR5-204	ENST00000547310	BCL2L12	Q9HB09	334 aa		12.55	□□□□□ -0.4
LGR5-204	ENST00000547310	LAPTM4A	Q15012	233 aa		12.54	□□□□□ -0.4
LGR5-204	ENST00000547310	PLPP6	Q8IY26	295 aa		12.53	□□□□□ -0.4
LGR5-204	ENST00000547310	MRPL50	Q8N5N7	158 aa	Known RBP	12.52	□□□□□ -0.41
LGR5-204	ENST00000547310	STK25	O00506	426 aa		12.51	□□□□□ -0.41
LGR5-204	ENST00000547310	ZBED2	Q9BTP6	218 aa		12.49	□□□□□ -0.41
LGR5-204	ENST00000547310	GPHN	Q9NQX3	736 aa	Predicted RBP	12.49	□□□□□ -0.41
LGR5-204	ENST00000547310	PPP1R37	O75864	691 aa		12.47	□□□□□ -0.41
LGR5-204	ENST00000547310	LCE2B	O14633	110 aa		12.45	□□□□□ -0.42
LGR5-204	ENST00000547310	PTPRE	P23469	700 aa		12.45	□□□□□ -0.42
LGR5-204	ENST00000547310	TRAF7	Q6Q0C0	670 aa		12.45	□□□□□ -0.42
LGR5-204	ENST00000547310	ZNF454	Q8N9F8	522 aa		12.44	□□□□□ -0.42
LGR5-204	ENST00000547310	NBPF3	Q9H094	633 aa		12.44	□□□□□ -0.42
LGR5-204	ENST00000547310	ECM2	O94769	699 aa	Predicted RBP	12.43	□□□□□ -0.42
LGR5-204	ENST00000547310	DSG2	Q14126	1118 aa		12.41	□□□□□ -0.42
LGR5-204	ENST00000547310	OXER1	Q8TDS5	423 aa		12.41	□□□□□ -0.42
LGR5-204	ENST00000547310	FOSB	P53539	338 aa		12.4	□□□□□ -0.42
LGR5-204	ENST00000547310	NYAP1	Q6ZVC0	841 aa		12.38	□□□□□ -0.43
LGR5-204	ENST00000547310	GFRA3	O60609	400 aa		12.34	□□□□□ -0.43
LGR5-204	ENST00000547310	KCNC4	Q03721	635 aa		12.33	□□□□□ -0.44
LGR5-204	ENST00000547310	ANKK1	Q8NFD2	765 aa		12.33	□□□□□ -0.44
LGR5-204	ENST00000547310	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.32	□□□□□ -0.44
LGR5-204	ENST00000547310	RGL2	O15211	777 aa		12.31	□□□□□ -0.44
LGR5-204	ENST00000547310	RABGEF1	Q9UJ41	708 aa		12.3	□□□□□ -0.44
LGR5-204	ENST00000547310	JPH4	Q96JJ6	628 aa		12.29	□□□□□ -0.44
LGR5-204	ENST00000547310	SOWAHB	A6NEL2	793 aa		12.27	□□□□□ -0.45
LGR5-204	ENST00000547310	ZDHHC16	Q969W1	377 aa		12.27	□□□□□ -0.45
LGR5-204	ENST00000547310	LAPTM4B	Q86VI4	370 aa		12.26	□□□□□ -0.45
LGR5-204	ENST00000547310	ADAM33	Q9BZ11	813 aa		12.25	□□□□□ -0.45
LGR5-204	ENST00000547310	NRG2	O14511	850 aa	Predicted RBP	12.24	□□□□□ -0.45
LGR5-204	ENST00000547310	BCAM	P50895	628 aa		12.23	□□□□□ -0.45
LGR5-204	ENST00000547310	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.23	□□□□□ -0.45
LGR5-204	ENST00000547310	PPP1R3G	B7ZBB8	358 aa		12.2	□□□□□ -0.46
LGR5-204	ENST00000547310	ZNF787	Q6DD87	383 aa		12.2	□□□□□ -0.46
LGR5-204	ENST00000547310	WBP1L	Q9NX94	342 aa		12.19	□□□□□ -0.46
LGR5-204	ENST00000547310	ZFR	Q96KR1	1074 aa	Known RBP	12.16	□□□□□ -0.46
LGR5-204	ENST00000547310	ZNF775	Q96BV0	537 aa	Predicted RBP	12.15	□□□□□ -0.46
LGR5-204	ENST00000547310	ONECUT3	O60422	494 aa	Predicted RBP	12.14	□□□□□ -0.47
LGR5-204	ENST00000547310	EVI5	O60447	810 aa		12.14	□□□□□ -0.47

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