RNA–Protein interactions for RNA: ENST00000547094.1

LINC02399-201, Transcript of long intergenic non-protein coding RNA 2399, humanhuman

TSL 2 BASIC

Gene LINC02399, Length 400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02399-201ENST00000547094 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
LINC02399-201ENST00000547094 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
LINC02399-201ENST00000547094 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
LINC02399-201ENST00000547094 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
LINC02399-201ENST00000547094 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
LINC02399-201ENST00000547094 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
LINC02399-201ENST00000547094 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
LINC02399-201ENST00000547094 LHX8Q68G74 356 aa12.01□□□□□ -0.49
LINC02399-201ENST00000547094 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
LINC02399-201ENST00000547094 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
LINC02399-201ENST00000547094 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
LINC02399-201ENST00000547094 C2orf72A6NCS6 295 aa11.99□□□□□ -0.49
LINC02399-201ENST00000547094 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
LINC02399-201ENST00000547094 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
LINC02399-201ENST00000547094 MFSD10Q14728 455 aa11.95□□□□□ -0.5
LINC02399-201ENST00000547094 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
LINC02399-201ENST00000547094 KIF3CO14782 793 aa11.94□□□□□ -0.5
LINC02399-201ENST00000547094 FOXK1P85037 733 aa11.94□□□□□ -0.5
LINC02399-201ENST00000547094 DSG2Q14126 1118 aa11.93□□□□□ -0.5
LINC02399-201ENST00000547094 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
LINC02399-201ENST00000547094 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
LINC02399-201ENST00000547094 E2F4Q16254 413 aa11.88□□□□□ -0.51
LINC02399-201ENST00000547094 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
LINC02399-201ENST00000547094 SNPHO15079 494 aa11.82□□□□□ -0.52
LINC02399-201ENST00000547094 CAMK2BQ13554 666 aa11.81□□□□□ -0.52
LINC02399-201ENST00000547094 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
LINC02399-201ENST00000547094 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
LINC02399-201ENST00000547094 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
LINC02399-201ENST00000547094 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
LINC02399-201ENST00000547094 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC02399-201ENST00000547094 TBC1D12O60347 775 aa11.76□□□□□ -0.53
LINC02399-201ENST00000547094 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
LINC02399-201ENST00000547094 SLC34A2O95436 690 aa11.75□□□□□ -0.53
LINC02399-201ENST00000547094 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
LINC02399-201ENST00000547094 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
LINC02399-201ENST00000547094 NBR1Q14596 966 aa11.73□□□□□ -0.53
LINC02399-201ENST00000547094 DPYSL4O14531 572 aa11.72□□□□□ -0.53
LINC02399-201ENST00000547094 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
LINC02399-201ENST00000547094 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
LINC02399-201ENST00000547094 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
LINC02399-201ENST00000547094 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
LINC02399-201ENST00000547094 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
LINC02399-201ENST00000547094 ZSWIM6Q9HCJ5 1215 aa11.69□□□□□ -0.54
LINC02399-201ENST00000547094 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
LINC02399-201ENST00000547094 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
LINC02399-201ENST00000547094 BCANQ96GW7 911 aa11.67□□□□□ -0.54
LINC02399-201ENST00000547094 EVI5O60447 810 aa11.64□□□□□ -0.55
LINC02399-201ENST00000547094 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
LINC02399-201ENST00000547094 PDIA6Q15084 440 aa11.63□□□□□ -0.55
LINC02399-201ENST00000547094 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
LINC02399-201ENST00000547094 NUDT7P0C024 238 aa11.59□□□□□ -0.55
LINC02399-201ENST00000547094 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
LINC02399-201ENST00000547094 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC02399-201ENST00000547094 FAM163AQ96GL9 167 aaPredicted RBP11.59□□□□□ -0.55
LINC02399-201ENST00000547094 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
LINC02399-201ENST00000547094 SEMA3EO15041 775 aa11.57□□□□□ -0.56
LINC02399-201ENST00000547094 ST18O60284 1047 aa11.57□□□□□ -0.56
LINC02399-201ENST00000547094 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
LINC02399-201ENST00000547094 ANO8Q9HCE9 1232 aaPredicted RBP11.54□□□□□ -0.56
LINC02399-201ENST00000547094 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
LINC02399-201ENST00000547094 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
LINC02399-201ENST00000547094 PTGER2P43116 358 aa11.52□□□□□ -0.57
LINC02399-201ENST00000547094 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
LINC02399-201ENST00000547094 EMP3P54852 163 aa11.51□□□□□ -0.57
LINC02399-201ENST00000547094 DDX12PQ92771 950 aa11.51□□□□□ -0.57
LINC02399-201ENST00000547094 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
LINC02399-201ENST00000547094 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
LINC02399-201ENST00000547094 MLLT3P42568 568 aaPredicted RBP11.49□□□□□ -0.57
LINC02399-201ENST00000547094 ERBB3P21860 1342 aa11.48□□□□□ -0.57
LINC02399-201ENST00000547094 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
LINC02399-201ENST00000547094 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
LINC02399-201ENST00000547094 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
LINC02399-201ENST00000547094 EPAS1Q99814 870 aa11.47□□□□□ -0.57
LINC02399-201ENST00000547094 PHF14O94880 888 aa11.46□□□□□ -0.57
LINC02399-201ENST00000547094 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
LINC02399-201ENST00000547094 FOSBP53539 338 aa11.44□□□□□ -0.58
LINC02399-201ENST00000547094 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
LINC02399-201ENST00000547094 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
LINC02399-201ENST00000547094 PCDHGA10Q9Y5H3 936 aa11.42□□□□□ -0.58
LINC02399-201ENST00000547094 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
LINC02399-201ENST00000547094 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
LINC02399-201ENST00000547094 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
LINC02399-201ENST00000547094 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
LINC02399-201ENST00000547094 OSBPP22059 807 aa11.39□□□□□ -0.59
LINC02399-201ENST00000547094 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
LINC02399-201ENST00000547094 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
LINC02399-201ENST00000547094 MAP3K7O43318 606 aa11.38□□□□□ -0.59
LINC02399-201ENST00000547094 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
LINC02399-201ENST00000547094 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC02399-201ENST00000547094 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
LINC02399-201ENST00000547094 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
LINC02399-201ENST00000547094 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
LINC02399-201ENST00000547094 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
LINC02399-201ENST00000547094 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
LINC02399-201ENST00000547094 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
LINC02399-201ENST00000547094 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
LINC02399-201ENST00000547094 PTPREP23469 700 aa11.32□□□□□ -0.6
LINC02399-201ENST00000547094 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
LINC02399-201ENST00000547094 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
LINC02399-201ENST00000547094 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms